RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CSPP1Q1MSJ5 1256 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 NAA16Q6N069 864 aaPredicted RBP9□□□□□ -0.97
SPTLC1-205ENST00000477888 RPUSD2Q8IZ73 545 aaKnown RBP9□□□□□ -0.97
SPTLC1-205ENST00000477888 MSL3Q8N5Y2 521 aaKnown RBP9□□□□□ -0.97
SPTLC1-205ENST00000477888 ANKS1AQ92625 1134 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 ATG4CQ96DT6 458 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 MMP19Q99542 508 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 NOC4LQ9BVI4 516 aaKnown RBP9□□□□□ -0.97
SPTLC1-205ENST00000477888 TANGO6Q9C0B7 1094 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 UPF3AQ9H1J1 476 aaKnown RBP9□□□□□ -0.97
SPTLC1-205ENST00000477888 WNT8AQ9H1J5 351 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 CABP5Q9NP86 173 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 ATAD5Q96QE3 1844 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 PTPRCP08575 1304 aa9□□□□□ -0.97
SPTLC1-205ENST00000477888 CACNA1FO60840 1977 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 SIPA1L1O43166 1804 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 C6orf222P0C671 652 aaPredicted RBP8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 SHMT1P34896 483 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 GJA9P57773 515 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 NKX3-2P78367 333 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 TTLL4Q14679 1199 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 KCTD2Q14681 263 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 SEPT2Q15019 361 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 LEXMQ3ZCV2 418 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 GNASQ5JWF2 1037 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 MAMDC4Q6UXC1 1216 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 RIOX2Q8IUF8 465 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 ARNTL2Q8WYA1 636 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 AGBL1Q96MI9 1066 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 NEUROD6Q96NK8 337 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 LMCD1Q9NZU5 365 aa8.99□□□□□ -0.97
SPTLC1-205ENST00000477888 MYH13Q9UKX3 1938 aa8.98□□□□□ -0.97
SPTLC1-205ENST00000477888 ZBBXA8MT70 800 aa8.98□□□□□ -0.97
SPTLC1-205ENST00000477888 DCXO43602 365 aa8.98□□□□□ -0.97
SPTLC1-205ENST00000477888 FLOT1O75955 427 aa8.98□□□□□ -0.97
SPTLC1-205ENST00000477888 SSTR3P32745 418 aaPredicted RBP8.98□□□□□ -0.97
SPTLC1-205ENST00000477888 DYNLL1P63167 89 aaKnown RBP8.98□□□□□ -0.97
SPTLC1-205ENST00000477888 CCDC184Q52MB2 194 aa8.98□□□□□ -0.97
SPTLC1-205ENST00000477888 SIAH1Q8IUQ4 282 aa8.98□□□□□ -0.97
SPTLC1-205ENST00000477888 PHOSPHO2Q8TCD6 241 aa8.98□□□□□ -0.97
SPTLC1-205ENST00000477888 SALL2Q9Y467 1007 aaPredicted RBP8.98□□□□□ -0.97
SPTLC1-205ENST00000477888 SMCHD1A6NHR9 2005 aa8.98□□□□□ -0.97
SPTLC1-205ENST00000477888 GRIN2DO15399 1336 aa8.98□□□□□ -0.97
SPTLC1-205ENST00000477888 LRRC37A2A6NM11 1700 aa8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 GRXCR2A6NFK2 248 aa8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 IGSF3O75054 1194 aa8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 UBTFL1P0CB47 393 aaPredicted RBP8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 IL9P15248 144 aa8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 STAT3P40763 770 aa8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 PLCD1P51178 756 aa8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 ACVR2BQ13705 512 aa8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 CCDC144BQ3MJ40 725 aa8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 HFE2Q6ZVN8 426 aa8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 SPRED2Q7Z698 418 aa8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 TTC6Q86TZ1 520 aa8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 SCLYQ96I15 445 aa8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 TRPV6Q9H1D0 765 aa8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 UBE2ZQ9H832 354 aaPredicted RBP8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 SPC25Q9HBM1 224 aa8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 ZHX1Q9UKY1 873 aaPredicted RBP8.97□□□□□ -0.97
SPTLC1-205ENST00000477888 DNAJC25-GNG10A0A024R161 153 aa8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 B4GALT4O60513 344 aa8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 CYP2E1P05181 493 aaPredicted RBP8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 PFKMP08237 780 aa8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 UQCRFS1P1P0C7P4 283 aa8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 GABPAQ06546 454 aa8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 ITGA7Q13683 1181 aa8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 GORABQ5T7V8 394 aa8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 CXCL17Q6UXB2 119 aa8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 ZNF467Q7Z7K2 595 aaPredicted RBP8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 SPICE1Q8N0Z3 855 aa8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 REPS2Q8NFH8 660 aa8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 MFSD14AQ96MC6 490 aa8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 SLC9A7Q96T83 725 aa8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 SEZ6LQ9BYH1 1024 aa8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 SNRKQ9NRH2 765 aa8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 ZNF214Q9UL59 606 aaPredicted RBP8.96□□□□□ -0.98
SPTLC1-205ENST00000477888 TULP1O00294 542 aaPredicted RBP8.95□□□□□ -0.98
SPTLC1-205ENST00000477888 VWA5AO00534 786 aa8.95□□□□□ -0.98
SPTLC1-205ENST00000477888 CABYRO75952 493 aa8.95□□□□□ -0.98
SPTLC1-205ENST00000477888 KCNA5P22460 613 aa8.95□□□□□ -0.98
SPTLC1-205ENST00000477888 USP5P45974 858 aa8.95□□□□□ -0.98
SPTLC1-205ENST00000477888 BEX3Q00994 111 aa8.95□□□□□ -0.98
SPTLC1-205ENST00000477888 POLA2Q14181 598 aa8.95□□□□□ -0.98
SPTLC1-205ENST00000477888 PTCRAQ6ISU1 281 aaPredicted RBP8.95□□□□□ -0.98
SPTLC1-205ENST00000477888 HERC6Q8IVU3 1022 aa8.95□□□□□ -0.98
SPTLC1-205ENST00000477888 PRSS33Q8NF86 280 aa8.95□□□□□ -0.98
SPTLC1-205ENST00000477888 ABHD16BQ9H3Z7 469 aa8.95□□□□□ -0.98
SPTLC1-205ENST00000477888 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.95□□□□□ -0.98
SPTLC1-205ENST00000477888 TMX2Q9Y320 296 aa8.95□□□□□ -0.98
SPTLC1-205ENST00000477888 C5orf42Q9H799 3197 aa8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 C19orf67A6NJJ6 358 aa8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 KIF28PB7ZC32 967 aa8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 WDR46O15213 610 aaKnown RBP8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 COPB2P35606 906 aa8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 PUS10Q3MIT2 529 aaKnown RBP8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 IER5LQ5T953 404 aa8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 MAGEB6Q8N7X4 407 aa8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 NEK9Q8TD19 979 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms