RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 ACSBG1Q96GR2 724 aa7.05□□□□□ -1.28
VPS45-207ENST00000477558 METTL5Q9NRN9 209 aaKnown RBP7.05□□□□□ -1.28
VPS45-207ENST00000477558 TOGARAM1Q9Y4F4 1720 aa7.05□□□□□ -1.28
VPS45-207ENST00000477558 RREB1Q92766 1687 aa7.05□□□□□ -1.28
VPS45-207ENST00000477558 ADAMTS7Q9UKP4 1686 aa7.05□□□□□ -1.28
VPS45-207ENST00000477558 DOT1LQ8TEK3 1739 aa7.04□□□□□ -1.28
VPS45-207ENST00000477558 ADH5P11766 374 aa7.04□□□□□ -1.28
VPS45-207ENST00000477558 AMPHP49418 695 aa7.04□□□□□ -1.28
VPS45-207ENST00000477558 FAM160A1Q05DH4 1040 aa7.04□□□□□ -1.28
VPS45-207ENST00000477558 ZNF394Q53GI3 561 aa7.04□□□□□ -1.28
VPS45-207ENST00000477558 NBPF6Q5VWK0 638 aa7.04□□□□□ -1.28
VPS45-207ENST00000477558 ANKRD34AQ69YU3 496 aa7.04□□□□□ -1.28
VPS45-207ENST00000477558 TOM1L2Q6ZVM7 507 aa7.04□□□□□ -1.28
VPS45-207ENST00000477558 ARMC10Q8N2F6 343 aa7.04□□□□□ -1.28
VPS45-207ENST00000477558 GAL3ST3Q96A11 431 aa7.04□□□□□ -1.28
VPS45-207ENST00000477558 FAM46AQ96IP4 442 aaKnown RBP7.04□□□□□ -1.28
VPS45-207ENST00000477558 NBPF4Q96M43 638 aa7.04□□□□□ -1.28
VPS45-207ENST00000477558 CEP41Q9BYV8 373 aa7.04□□□□□ -1.28
VPS45-207ENST00000477558 PCDHGC5Q9Y5F6 944 aa7.04□□□□□ -1.28
VPS45-207ENST00000477558 CSADQ9Y600 493 aa7.04□□□□□ -1.28
VPS45-207ENST00000477558 SRCAPQ6ZRS2 3230 aa7.04□□□□□ -1.28
VPS45-207ENST00000477558 SART1O43290 800 aaKnown RBP7.03□□□□□ -1.28
VPS45-207ENST00000477558 SLFN14P0C7P3 912 aa7.03□□□□□ -1.28
VPS45-207ENST00000477558 LMNB1P20700 586 aa7.03□□□□□ -1.28
VPS45-207ENST00000477558 EVA1CP58658 441 aa7.03□□□□□ -1.28
VPS45-207ENST00000477558 CAMK2GQ13555 558 aaPredicted RBP7.03□□□□□ -1.28
VPS45-207ENST00000477558 EIF4A2Q14240 407 aaKnown RBP7.03□□□□□ -1.28
VPS45-207ENST00000477558 INPP5AQ14642 412 aa7.03□□□□□ -1.28
VPS45-207ENST00000477558 HP1BP3Q5SSJ5 553 aaPredicted RBP7.03□□□□□ -1.28
VPS45-207ENST00000477558 MORC1Q86VD1 984 aa7.03□□□□□ -1.28
VPS45-207ENST00000477558 C2CD4AQ8NCU7 369 aaPredicted RBP7.03□□□□□ -1.28
VPS45-207ENST00000477558 RHOVQ96L33 236 aa7.03□□□□□ -1.28
VPS45-207ENST00000477558 TPSG1Q9NRR2 321 aa7.03□□□□□ -1.28
VPS45-207ENST00000477558 PCDHA4Q9UN74 947 aa7.03□□□□□ -1.28
VPS45-207ENST00000477558 PCDHGB7Q9Y5F8 929 aa7.03□□□□□ -1.28
VPS45-207ENST00000477558 DCDC2CA8MYV0 355 aa7.02□□□□□ -1.29
VPS45-207ENST00000477558 TMPRSS2O15393 492 aa7.02□□□□□ -1.29
VPS45-207ENST00000477558 IL2RBP14784 551 aa7.02□□□□□ -1.29
VPS45-207ENST00000477558 IL13P35225 146 aa7.02□□□□□ -1.29
VPS45-207ENST00000477558 RACK1P63244 317 aaKnown RBP7.02□□□□□ -1.29
VPS45-207ENST00000477558 LMNB2Q03252 620 aa7.02□□□□□ -1.29
VPS45-207ENST00000477558 ZC3H12AQ5D1E8 599 aaKnown RBP7.02□□□□□ -1.29
VPS45-207ENST00000477558 BNC2Q6ZN30 1099 aaPredicted RBP7.02□□□□□ -1.29
VPS45-207ENST00000477558 DYMQ7RTS9 669 aa7.02□□□□□ -1.29
VPS45-207ENST00000477558 KRT27Q7Z3Y8 459 aa7.02□□□□□ -1.29
VPS45-207ENST00000477558 C12orf40Q86WS4 652 aa7.02□□□□□ -1.29
VPS45-207ENST00000477558 TP53INP1Q96A56 240 aa7.02□□□□□ -1.29
VPS45-207ENST00000477558 CRIM1Q9NZV1 1036 aa7.02□□□□□ -1.29
VPS45-207ENST00000477558 ADAMTS1Q9UHI8 967 aa7.02□□□□□ -1.29
VPS45-207ENST00000477558 ACTL7BQ9Y614 415 aa7.02□□□□□ -1.29
VPS45-207ENST00000477558 BTAF1O14981 1849 aa7.02□□□□□ -1.29
VPS45-207ENST00000477558 VIRMAQ69YN4 1812 aaKnown RBP7.02□□□□□ -1.29
VPS45-207ENST00000477558 F13A1P00488 732 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 GARTP22102 1010 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 ID3Q02535 119 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 PWP1Q13610 501 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 CC2D1BQ5T0F9 858 aaKnown RBP7.01□□□□□ -1.29
VPS45-207ENST00000477558 CDPF1Q6NVV7 123 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 FBXL19Q6PCT2 694 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 USP48Q86UV5 1035 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 NT5DC4Q86YG4 428 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 TRIM42Q8IWZ5 723 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 FANCD2OSQ96PS1 177 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 MIR1-1HGQ9H1L0 117 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 DISC1Q9NRI5 854 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 USP35Q9P2H5 1018 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 AP4E1Q9UPM8 1137 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 LY75O60449 1722 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 NUP188Q5SRE5 1749 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 SYNGAP1Q96PV0 1343 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 ITGB4P16144 1822 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 MRC1P22897 1456 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 PAPPAQ13219 1627 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 BMP3P12645 472 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 TCF3P15923 654 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 PPP2R1AP30153 589 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 EIF4A3P38919 411 aaKnown RBP7.01□□□□□ -1.29
VPS45-207ENST00000477558 MTHFSP49914 203 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 DDB1Q16531 1140 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 SGO2Q562F6 1265 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 SCARA3Q6AZY7 606 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 LRFN4Q6PJG9 635 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 MARCH10Q8NA82 808 aaPredicted RBP7.01□□□□□ -1.29
VPS45-207ENST00000477558 GOLM1Q8NBJ4 401 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 IGSF5Q9NSI5 407 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 FAM105AQ9NUU6 356 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 DDX41Q9UJV9 622 aaKnown RBP7.01□□□□□ -1.29
VPS45-207ENST00000477558 SCN11AQ9UI33 1791 aa7.01□□□□□ -1.29
VPS45-207ENST00000477558 CICQ96RK0 1608 aaPredicted RBP7□□□□□ -1.29
VPS45-207ENST00000477558 GAS2O43903 313 aaKnown RBP7□□□□□ -1.29
VPS45-207ENST00000477558 TNNT2P45379 298 aaPredicted RBP7□□□□□ -1.29
VPS45-207ENST00000477558 ASPAP45381 313 aa7□□□□□ -1.29
VPS45-207ENST00000477558 RSPO4Q2I0M5 234 aaPredicted RBP7□□□□□ -1.29
VPS45-207ENST00000477558 PPP1R3FQ6ZSY5 799 aaPredicted RBP7□□□□□ -1.29
VPS45-207ENST00000477558 FBXO27Q8NI29 283 aa7□□□□□ -1.29
VPS45-207ENST00000477558 FBLIM1Q8WUP2 373 aa7□□□□□ -1.29
VPS45-207ENST00000477558 ZNF296Q8WUU4 475 aaPredicted RBP7□□□□□ -1.29
VPS45-207ENST00000477558 UTP4Q969X6 686 aaKnown RBP7□□□□□ -1.29
VPS45-207ENST00000477558 PLPPR2Q96GM1 343 aa7□□□□□ -1.29
VPS45-207ENST00000477558 MYRFLQ96LU7 910 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms