RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 TOMM22Q9NS69 142 aa18.62■□□□□ 0.57
CLDN11-204ENST00000477531 NRBP1Q9UHY1 535 aa18.62■□□□□ 0.57
CLDN11-204ENST00000477531 TRIOBPQ9H2D6 2365 aa18.61■□□□□ 0.57
CLDN11-204ENST00000477531 MYH4Q9Y623 1939 aa18.61■□□□□ 0.57
CLDN11-204ENST00000477531 PFASO15067 1338 aa18.61■□□□□ 0.57
CLDN11-204ENST00000477531 A0A0D9SFI3 127 aa18.61■□□□□ 0.57
CLDN11-204ENST00000477531 IGHA2P01877 340 aa18.61■□□□□ 0.57
CLDN11-204ENST00000477531 IGHDP01880 384 aa18.61■□□□□ 0.57
CLDN11-204ENST00000477531 PGK2P07205 417 aa18.61■□□□□ 0.57
CLDN11-204ENST00000477531 COL6A1P12109 1028 aa18.61■□□□□ 0.57
CLDN11-204ENST00000477531 FXR1P51114 621 aaKnown RBP eCLIP18.61■□□□□ 0.57
CLDN11-204ENST00000477531 NMIQ13287 307 aaPredicted RBP18.61■□□□□ 0.57
CLDN11-204ENST00000477531 SENP6Q9GZR1 1112 aaPredicted RBP18.61■□□□□ 0.57
CLDN11-204ENST00000477531 PCDH10Q9P2E7 1040 aa18.61■□□□□ 0.57
CLDN11-204ENST00000477531 ZMYND8Q9ULU4 1186 aaPredicted RBP18.61■□□□□ 0.57
CLDN11-204ENST00000477531 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.61■□□□□ 0.57
CLDN11-204ENST00000477531 PARP14Q460N5 1801 aa18.6■□□□□ 0.57
CLDN11-204ENST00000477531 TMEM232C9JQI7 657 aa18.6■□□□□ 0.57
CLDN11-204ENST00000477531 DNM1LO00429 736 aa18.6■□□□□ 0.57
CLDN11-204ENST00000477531 ATP2A1O14983 1001 aa18.6■□□□□ 0.57
CLDN11-204ENST00000477531 FOXP2O15409 715 aa18.6■□□□□ 0.57
CLDN11-204ENST00000477531 FGAP02671 866 aa18.6■□□□□ 0.57
CLDN11-204ENST00000477531 SLC1A4P43007 532 aa18.6■□□□□ 0.57
CLDN11-204ENST00000477531 STAT2P52630 851 aa18.6■□□□□ 0.57
CLDN11-204ENST00000477531 PRAMEF19Q5SWL8 479 aa18.6■□□□□ 0.57
CLDN11-204ENST00000477531 FAM160B2Q86V87 743 aa18.6■□□□□ 0.57
CLDN11-204ENST00000477531 GMCL1Q96IK5 515 aa18.6■□□□□ 0.57
CLDN11-204ENST00000477531 TINF2Q9BSI4 451 aa18.6■□□□□ 0.57
CLDN11-204ENST00000477531 SLC38A10Q9HBR0 1119 aa18.6■□□□□ 0.57
CLDN11-204ENST00000477531 FBXO40Q9UH90 709 aa18.6■□□□□ 0.57
CLDN11-204ENST00000477531 SUPT16HQ9Y5B9 1047 aaKnown RBP18.6■□□□□ 0.57
CLDN11-204ENST00000477531 COL11A1P12107 1806 aaPredicted RBP18.6■□□□□ 0.57
CLDN11-204ENST00000477531 CCDC171Q6TFL3 1326 aa18.59■□□□□ 0.57
CLDN11-204ENST00000477531 KBTBD13C9JR72 458 aa18.59■□□□□ 0.57
CLDN11-204ENST00000477531 ORC4O43929 436 aa18.59■□□□□ 0.57
CLDN11-204ENST00000477531 MYCNP04198 464 aaPredicted RBP18.59■□□□□ 0.57
CLDN11-204ENST00000477531 HSPD1P10809 573 aaKnown RBP18.59■□□□□ 0.57
CLDN11-204ENST00000477531 OAZ1P54368 228 aa18.59■□□□□ 0.57
CLDN11-204ENST00000477531 ZNF792Q3KQV3 632 aa18.59■□□□□ 0.57
CLDN11-204ENST00000477531 RRP12Q5JTH9 1297 aaKnown RBP18.59■□□□□ 0.57
CLDN11-204ENST00000477531 ANO1Q5XXA6 986 aa18.59■□□□□ 0.57
CLDN11-204ENST00000477531 PLEKHM2Q8IWE5 1019 aa18.59■□□□□ 0.57
CLDN11-204ENST00000477531 STAG1Q8WVM7 1258 aa18.59■□□□□ 0.57
CLDN11-204ENST00000477531 OSBPL3Q9H4L5 887 aa18.59■□□□□ 0.57
CLDN11-204ENST00000477531 RAVER2Q9HCJ3 691 aaKnown RBP18.59■□□□□ 0.57
CLDN11-204ENST00000477531 INCENPQ9NQS7 918 aa18.59■□□□□ 0.57
CLDN11-204ENST00000477531 ZNFX1Q9P2E3 1918 aaKnown RBP18.59■□□□□ 0.57
CLDN11-204ENST00000477531 A0A1W2PPC1 479 aa18.58■□□□□ 0.56
CLDN11-204ENST00000477531 HIP1O00291 1037 aa18.58■□□□□ 0.56
CLDN11-204ENST00000477531 SDSP20132 328 aa18.58■□□□□ 0.56
CLDN11-204ENST00000477531 MCCP23508 829 aa18.58■□□□□ 0.56
CLDN11-204ENST00000477531 ANKRD35Q8N283 1001 aa18.58■□□□□ 0.56
CLDN11-204ENST00000477531 MSL3Q8N5Y2 521 aaKnown RBP18.58■□□□□ 0.56
CLDN11-204ENST00000477531 CHST13Q8NET6 341 aa18.58■□□□□ 0.56
CLDN11-204ENST00000477531 DIAPH3Q9NSV4 1193 aa18.58■□□□□ 0.56
CLDN11-204ENST00000477531 CNPY2Q9Y2B0 182 aa18.58■□□□□ 0.56
CLDN11-204ENST00000477531 RIPK3Q9Y572 518 aa18.58■□□□□ 0.56
CLDN11-204ENST00000477531 ZMYM6O95789 1325 aa18.57■□□□□ 0.56
CLDN11-204ENST00000477531 RARBP10826 455 aa18.57■□□□□ 0.56
CLDN11-204ENST00000477531 PCP11498 1178 aaKnown RBP18.57■□□□□ 0.56
CLDN11-204ENST00000477531 LRRC26Q2I0M4 334 aa18.57■□□□□ 0.56
CLDN11-204ENST00000477531 GJC2Q5T442 439 aaPredicted RBP18.57■□□□□ 0.56
CLDN11-204ENST00000477531 RCSD1Q6JBY9 416 aa18.57■□□□□ 0.56
CLDN11-204ENST00000477531 ZNF589Q86UQ0 364 aaPredicted RBP18.57■□□□□ 0.56
CLDN11-204ENST00000477531 CHMP4CQ96CF2 233 aa18.57■□□□□ 0.56
CLDN11-204ENST00000477531 PRO3102Q9H379 93 aa18.57■□□□□ 0.56
CLDN11-204ENST00000477531 IL17RBQ9NRM6 502 aa18.57■□□□□ 0.56
CLDN11-204ENST00000477531 MTMR7Q9Y216 660 aa18.57■□□□□ 0.56
CLDN11-204ENST00000477531 NMT2O60551 498 aa18.56■□□□□ 0.56
CLDN11-204ENST00000477531 PLA2G6O60733 806 aa18.56■□□□□ 0.56
CLDN11-204ENST00000477531 FGRP09769 529 aa18.56■□□□□ 0.56
CLDN11-204ENST00000477531 SYN1P17600 705 aa18.56■□□□□ 0.56
CLDN11-204ENST00000477531 MFSD6Q6ZSS7 791 aa18.56■□□□□ 0.56
CLDN11-204ENST00000477531 KCTD1Q719H9 257 aa18.56■□□□□ 0.56
CLDN11-204ENST00000477531 RNF41Q9H4P4 317 aaPredicted RBP18.56■□□□□ 0.56
CLDN11-204ENST00000477531 ALPK3Q96L96 1907 aa18.55■□□□□ 0.56
CLDN11-204ENST00000477531 AKR1A1P14550 325 aa18.55■□□□□ 0.56
CLDN11-204ENST00000477531 ATN1P54259 1190 aaPredicted RBP18.55■□□□□ 0.56
CLDN11-204ENST00000477531 HAND2P61296 217 aa18.55■□□□□ 0.56
CLDN11-204ENST00000477531 CCDC96Q2M329 555 aa18.55■□□□□ 0.56
CLDN11-204ENST00000477531 CWC27Q6UX04 472 aaKnown RBP18.55■□□□□ 0.56
CLDN11-204ENST00000477531 DCAF4Q8WV16 495 aa18.55■□□□□ 0.56
CLDN11-204ENST00000477531 PRKAG2Q9UGJ0 569 aa18.55■□□□□ 0.56
CLDN11-204ENST00000477531 RANBP2P49792 3224 aaKnown RBP18.55■□□□□ 0.56
CLDN11-204ENST00000477531 SYNGAP1Q96PV0 1343 aa18.54■□□□□ 0.56
CLDN11-204ENST00000477531 TOP1P11387 765 aaKnown RBP18.54■□□□□ 0.56
CLDN11-204ENST00000477531 BMP8BP34820 402 aa18.54■□□□□ 0.56
CLDN11-204ENST00000477531 TKFCQ3LXA3 575 aa18.54■□□□□ 0.56
CLDN11-204ENST00000477531 AKNAD1Q5T1N1 836 aa18.54■□□□□ 0.56
CLDN11-204ENST00000477531 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.54■□□□□ 0.56
CLDN11-204ENST00000477531 ZNF467Q7Z7K2 595 aaPredicted RBP18.54■□□□□ 0.56
CLDN11-204ENST00000477531 RNF180Q86T96 592 aa18.54■□□□□ 0.56
CLDN11-204ENST00000477531 GDF15Q99988 308 aa18.54■□□□□ 0.56
CLDN11-204ENST00000477531 ACAD9Q9H845 621 aa18.54■□□□□ 0.56
CLDN11-204ENST00000477531 XPNPEP3Q9NQH7 507 aa18.54■□□□□ 0.56
CLDN11-204ENST00000477531 HOMER2Q9NSB8 354 aa18.54■□□□□ 0.56
CLDN11-204ENST00000477531 TCP11L1Q9NUJ3 509 aa18.54■□□□□ 0.56
CLDN11-204ENST00000477531 FRMPD3Q5JV73 1810 aa18.53■□□□□ 0.56
CLDN11-204ENST00000477531 DNAJC25-GNG10A0A024R161 153 aa18.53■□□□□ 0.56
CLDN11-204ENST00000477531 ZNF213O14771 459 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms