RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 GRXCR1A8MXD5 290 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 USP17L12C9JPN9 530 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 USP17L21D6R901 530 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 CCER2I3L3R5 266 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 SMIM22K7EJ46 135 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 IGHA2P01877 340 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 IGFBP4P22692 258 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 COPB2P35606 906 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 HNRNPUQ00839 825 aaKnown RBP eCLIP8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 FAAP100Q0VG06 881 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 PPIGQ13427 754 aaKnown RBP eCLIP8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 CCDC85BQ15834 202 aaPredicted RBP8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 KCNA10Q16322 511 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 ZNF792Q3KQV3 632 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 TJAP1Q5JTD0 557 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 CCDC174Q6PII3 467 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 NOL8Q76FK4 1167 aaKnown RBP8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 SIAH1Q8IUQ4 282 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 ANKRD35Q8N283 1001 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 MICALL1Q8N3F8 863 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 USP38Q8NB14 1042 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 PANK1Q8TE04 598 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 KIF1BPQ96EK5 621 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 GLT1D1Q96MS3 346 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 SLF1Q9BQI6 1058 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 PRDM12Q9H4Q4 367 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 KANSL2Q9H9L4 492 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 NRBP1Q9UHY1 535 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 PPP1R9AQ9ULJ8 1098 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 LRRC37A2A6NM11 1700 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 MROH7Q68CQ1 1323 aa8.02□□□□□ -1.13
RTFDC1-206ENST00000477485 CDH23Q9H251 3354 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 ROBO3Q96MS0 1386 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 MYADML2A6NDP7 307 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 MOXD2PA6NHM9 499 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 MINDY4BA8MYZ0 360 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 TNFRSF10AO00220 468 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 TLR3O15455 904 aaKnown RBP8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 ADAMTS4O75173 837 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 HMMRO75330 724 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 TIMP1P01033 207 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 CHGBP05060 677 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 ASGR1P07306 291 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 ZNF865P0CJ78 1059 aaPredicted RBP8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 ACRP10323 421 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 CSF2RAP15509 400 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 COL9A1P20849 921 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 ADD2P35612 726 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 PBX2P40425 430 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 C12orf60Q5U649 245 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 C16orf86Q6ZW13 317 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 TMEM199Q8N511 208 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 KIFC2Q96AC6 838 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 CHMP4CQ96CF2 233 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 TSEN34Q9BSV6 310 aaKnown RBP8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 TEX13BQ9BXU2 312 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 MKNK2Q9HBH9 465 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 HOMER2Q9NSB8 354 aa8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 ZNF214Q9UL59 606 aaPredicted RBP8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 DIS3Q9Y2L1 958 aaKnown RBP8.01□□□□□ -1.13
RTFDC1-206ENST00000477485 SCN5AQ14524 2016 aa8□□□□□ -1.13
RTFDC1-206ENST00000477485 A0A0U1RQG5 324 aaPredicted RBP8□□□□□ -1.13
RTFDC1-206ENST00000477485 ZBED4O75132 1171 aa8□□□□□ -1.13
RTFDC1-206ENST00000477485 IRX5P78411 483 aaPredicted RBP8□□□□□ -1.13
RTFDC1-206ENST00000477485 IKQ13123 557 aaPredicted RBP8□□□□□ -1.13
RTFDC1-206ENST00000477485 ACVR2BQ13705 512 aa8□□□□□ -1.13
RTFDC1-206ENST00000477485 CCDC144BQ3MJ40 725 aa8□□□□□ -1.13
RTFDC1-206ENST00000477485 GNASQ5JWF2 1037 aa8□□□□□ -1.13
RTFDC1-206ENST00000477485 MFSD5Q6N075 450 aa8□□□□□ -1.13
RTFDC1-206ENST00000477485 ZSCAN25Q6NSZ9 544 aa8□□□□□ -1.13
RTFDC1-206ENST00000477485 ANKRD33Q7Z3H0 272 aa8□□□□□ -1.13
RTFDC1-206ENST00000477485 PCSK9Q8NBP7 692 aaKnown RBP8□□□□□ -1.13
RTFDC1-206ENST00000477485 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8□□□□□ -1.13
RTFDC1-206ENST00000477485 TOX2Q96NM4 488 aa8□□□□□ -1.13
RTFDC1-206ENST00000477485 PBX4Q9BYU1 374 aa8□□□□□ -1.13
RTFDC1-206ENST00000477485 RAVER2Q9HCJ3 691 aaKnown RBP8□□□□□ -1.13
RTFDC1-206ENST00000477485 CDKN2AIPQ9NXV6 580 aaPredicted RBP8□□□□□ -1.13
RTFDC1-206ENST00000477485 THEGQ9P2T0 379 aa8□□□□□ -1.13
RTFDC1-206ENST00000477485 ARPP21Q9UBL0 812 aaPredicted RBP8□□□□□ -1.13
RTFDC1-206ENST00000477485 MSRAQ9UJ68 235 aa8□□□□□ -1.13
RTFDC1-206ENST00000477485 PRUNE2Q8WUY3 3088 aa8□□□□□ -1.13
RTFDC1-206ENST00000477485 SYNGAP1Q96PV0 1343 aa8□□□□□ -1.13
RTFDC1-206ENST00000477485 VCANP13611 3396 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 F5H6K3 240 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 DUSP11O75319 330 aaKnown RBP7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 SNAI1O95863 264 aaPredicted RBP7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 CYP2C18P33260 490 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 TDO2P48775 406 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 BEX3Q00994 111 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 KLRC3Q07444 240 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 CTR9Q6PD62 1173 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 PSRC1Q6PGN9 363 aaPredicted RBP7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 ZNF365Q70YC5 407 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 LRRC47Q8N1G4 583 aaKnown RBP7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 MSL3Q8N5Y2 521 aaKnown RBP7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 PRPF38AQ8NAV1 312 aaKnown RBP7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 ADAMTS19Q8TE59 1207 aa7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 MTIF3Q9H2K0 278 aaKnown RBP7.99□□□□□ -1.13
RTFDC1-206ENST00000477485 NKX2-4Q9H2Z4 354 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms