RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PHIPQ8WWQ0 1821 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 MAST2Q6P0Q8 1798 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 A0A1W2PPC1 479 aa8.84□□□□□ -0.99
BRCA1-214ENST00000477152 RHBDL3P58872 404 aa8.84□□□□□ -0.99
BRCA1-214ENST00000477152 MCCD1P59942 119 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-214ENST00000477152 CAP1Q01518 475 aa8.84□□□□□ -0.99
BRCA1-214ENST00000477152 SPP2Q13103 211 aa8.84□□□□□ -0.99
BRCA1-214ENST00000477152 PDE3AQ14432 1141 aa8.84□□□□□ -0.99
BRCA1-214ENST00000477152 ANKRD13CQ8N6S4 541 aa8.84□□□□□ -0.99
BRCA1-214ENST00000477152 DDX4Q9NQI0 724 aaKnown RBP8.84□□□□□ -0.99
BRCA1-214ENST00000477152 USTQ9Y2C2 406 aa8.84□□□□□ -0.99
BRCA1-214ENST00000477152 GLRX3O76003 335 aaKnown RBP8.84□□□□□ -0.99
BRCA1-214ENST00000477152 INHAP05111 366 aa8.84□□□□□ -0.99
BRCA1-214ENST00000477152 ARID5BQ14865 1188 aa8.84□□□□□ -0.99
BRCA1-214ENST00000477152 NECAB2Q7Z6G3 386 aa8.84□□□□□ -0.99
BRCA1-214ENST00000477152 KCTD17Q8N5Z5 321 aa8.84□□□□□ -0.99
BRCA1-214ENST00000477152 ZNF512BQ96KM6 892 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-214ENST00000477152 WDR18Q9BV38 432 aa8.84□□□□□ -0.99
BRCA1-214ENST00000477152 LOC285556D6RIA3 1793 aa8.83□□□□□ -1
BRCA1-214ENST00000477152 LGR5O75473 907 aa8.83□□□□□ -1
BRCA1-214ENST00000477152 HMGCRP04035 888 aa8.83□□□□□ -1
BRCA1-214ENST00000477152 TRIM27P14373 513 aa8.83□□□□□ -1
BRCA1-214ENST00000477152 CTGFP29279 349 aa8.83□□□□□ -1
BRCA1-214ENST00000477152 EML3Q32P44 896 aa8.83□□□□□ -1
BRCA1-214ENST00000477152 HSP90AB4PQ58FF6 505 aa8.83□□□□□ -1
BRCA1-214ENST00000477152 ERC1Q8IUD2 1116 aa8.83□□□□□ -1
BRCA1-214ENST00000477152 SOCS4Q8WXH5 440 aa8.83□□□□□ -1
BRCA1-214ENST00000477152 GABRQQ9UN88 632 aa8.83□□□□□ -1
BRCA1-214ENST00000477152 PCDHB11Q9Y5F2 797 aa8.83□□□□□ -1
BRCA1-214ENST00000477152 FAM196BA6NMK8 535 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 SURF6O75683 361 aaKnown RBP8.82□□□□□ -1
BRCA1-214ENST00000477152 SCTRP47872 440 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 FXR1P51114 621 aaKnown RBP eCLIP8.82□□□□□ -1
BRCA1-214ENST00000477152 HMGCS2P54868 508 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 CCNA1P78396 465 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 MAP7D1Q3KQU3 841 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 TNNI3KQ59H18 835 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 SHISA4Q96DD7 197 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 KCTD15Q96SI1 283 aaPredicted RBP8.82□□□□□ -1
BRCA1-214ENST00000477152 CHMP4BQ9H444 224 aaKnown RBP8.82□□□□□ -1
BRCA1-214ENST00000477152 AATFQ9NY61 560 aaKnown RBP eCLIP8.82□□□□□ -1
BRCA1-214ENST00000477152 FPGT-TNNI3KV9GXZ4 949 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 RPTORQ8N122 1335 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 ESPNB1AK53 854 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 MAPK4P31152 587 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 HOXA7P31268 230 aaPredicted RBP8.82□□□□□ -1
BRCA1-214ENST00000477152 GGCXP38435 758 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 MCAMP43121 646 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 USP5P45974 858 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 USP14P54578 494 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 BACE1P56817 501 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 ATP8B2P98198 1209 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 MAP3K12Q12852 859 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 NBPF20Q3BBV1 942 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 TTC6Q86TZ1 520 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 GPRC5AQ8NFJ5 357 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 ZNF592Q92610 1267 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 DEFB118Q96PH6 123 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 ASCC2Q9H1I8 757 aaPredicted RBP8.82□□□□□ -1
BRCA1-214ENST00000477152 CABP5Q9NP86 173 aa8.82□□□□□ -1
BRCA1-214ENST00000477152 FOCADQ5VW36 1801 aa8.81□□□□□ -1
BRCA1-214ENST00000477152 ZBTB7BO15156 539 aaPredicted RBP8.81□□□□□ -1
BRCA1-214ENST00000477152 ELNP15502 786 aa8.81□□□□□ -1
BRCA1-214ENST00000477152 SCNN1AP37088 669 aa8.81□□□□□ -1
BRCA1-214ENST00000477152 DPYDQ12882 1025 aa8.81□□□□□ -1
BRCA1-214ENST00000477152 MMRN1Q13201 1228 aa8.81□□□□□ -1
BRCA1-214ENST00000477152 TTF1Q15361 905 aaPredicted RBP8.81□□□□□ -1
BRCA1-214ENST00000477152 EHBP1Q8NDI1 1231 aa8.81□□□□□ -1
BRCA1-214ENST00000477152 SH3RF3Q8TEJ3 882 aaPredicted RBP8.81□□□□□ -1
BRCA1-214ENST00000477152 TGFBRAP1Q8WUH2 860 aa8.81□□□□□ -1
BRCA1-214ENST00000477152 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.81□□□□□ -1
BRCA1-214ENST00000477152 GZF1Q9H116 711 aaPredicted RBP8.81□□□□□ -1
BRCA1-214ENST00000477152 PAK6Q9NQU5 681 aaPredicted RBP8.81□□□□□ -1
BRCA1-214ENST00000477152 MORF4L1Q9UBU8 362 aa8.81□□□□□ -1
BRCA1-214ENST00000477152 PNMA6EA0A0J9YXQ4 647 aa8.81□□□□□ -1
BRCA1-214ENST00000477152 XRCC5P13010 732 aaKnown RBP8.81□□□□□ -1
BRCA1-214ENST00000477152 ELOAQ14241 798 aaKnown RBP8.81□□□□□ -1
BRCA1-214ENST00000477152 TREML2Q5T2D2 321 aa8.81□□□□□ -1
BRCA1-214ENST00000477152 VASH1Q7L8A9 365 aaPredicted RBP8.81□□□□□ -1
BRCA1-214ENST00000477152 UBE2Q1Q7Z7E8 422 aa8.81□□□□□ -1
BRCA1-214ENST00000477152 SSH3Q8TE77 659 aa8.81□□□□□ -1
BRCA1-214ENST00000477152 FEZ1Q99689 392 aa8.81□□□□□ -1
BRCA1-214ENST00000477152 MYH1P12882 1939 aa8.8□□□□□ -1
BRCA1-214ENST00000477152 STAU1O95793 577 aaKnown RBP8.8□□□□□ -1
BRCA1-214ENST00000477152 CYP7A1P22680 504 aa8.8□□□□□ -1
BRCA1-214ENST00000477152 RGS2P41220 211 aa8.8□□□□□ -1
BRCA1-214ENST00000477152 INTS6LQ5JSJ4 861 aaKnown RBP8.8□□□□□ -1
BRCA1-214ENST00000477152 MAPKAPK5Q8IW41 473 aa8.8□□□□□ -1
BRCA1-214ENST00000477152 ITPRIPQ8IWB1 547 aa8.8□□□□□ -1
BRCA1-214ENST00000477152 TMEM57Q8N5G2 664 aa8.8□□□□□ -1
BRCA1-214ENST00000477152 NOP58Q9Y2X3 529 aaKnown RBP8.8□□□□□ -1
BRCA1-214ENST00000477152 FLT1P17948 1338 aa8.8□□□□□ -1
BRCA1-214ENST00000477152 CDK5RAP2Q96SN8 1893 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 IDH1O75874 414 aaKnown RBP8.79□□□□□ -1
BRCA1-214ENST00000477152 DKK1O94907 266 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 BRD1O95696 1058 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 ZKSCAN1P17029 563 aaPredicted RBP8.79□□□□□ -1
BRCA1-214ENST00000477152 VARSP26640 1264 aaKnown RBP8.79□□□□□ -1
BRCA1-214ENST00000477152 WNT7BP56706 349 aa8.79□□□□□ -1
BRCA1-214ENST00000477152 PHLDB3Q6NSJ2 640 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms