RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 PPP1R9AQ9ULJ8 1098 aa13.75□□□□□ -0.21
BRCA1-213ENST00000476777 PRRC2BQ5JSZ5 2229 aaKnown RBP13.75□□□□□ -0.21
BRCA1-213ENST00000476777 ELP1O95163 1332 aa13.74□□□□□ -0.21
BRCA1-213ENST00000476777 ZNF532Q9HCE3 1301 aa13.74□□□□□ -0.21
BRCA1-213ENST00000476777 TCRBV5S4A2TA0A5A2 114 aa13.74□□□□□ -0.21
BRCA1-213ENST00000476777 MYADML2A6NDP7 307 aa13.74□□□□□ -0.21
BRCA1-213ENST00000476777 SNAI1O95863 264 aaPredicted RBP13.74□□□□□ -0.21
BRCA1-213ENST00000476777 CSF2RAP15509 400 aa13.74□□□□□ -0.21
BRCA1-213ENST00000476777 COPB2P35606 906 aa13.74□□□□□ -0.21
BRCA1-213ENST00000476777 MRPS5P82675 430 aaKnown RBP13.74□□□□□ -0.21
BRCA1-213ENST00000476777 CCDC174Q6PII3 467 aa13.74□□□□□ -0.21
BRCA1-213ENST00000476777 CCDC129Q6ZRS4 1044 aa13.74□□□□□ -0.21
BRCA1-213ENST00000476777 MSL3Q8N5Y2 521 aaKnown RBP13.74□□□□□ -0.21
BRCA1-213ENST00000476777 CCDC17Q96LX7 622 aa13.74□□□□□ -0.21
BRCA1-213ENST00000476777 FAM184BQ9ULE4 1060 aa13.74□□□□□ -0.21
BRCA1-213ENST00000476777 BRWD1Q9NSI6 2320 aa13.74□□□□□ -0.21
BRCA1-213ENST00000476777 MROH7Q68CQ1 1323 aa13.73□□□□□ -0.21
BRCA1-213ENST00000476777 SYNGAP1Q96PV0 1343 aa13.73□□□□□ -0.21
BRCA1-213ENST00000476777 SMIM22K7EJ46 135 aa13.73□□□□□ -0.21
BRCA1-213ENST00000476777 DUSP11O75319 330 aaKnown RBP13.73□□□□□ -0.21
BRCA1-213ENST00000476777 ACRP10323 421 aa13.73□□□□□ -0.21
BRCA1-213ENST00000476777 EEF2P13639 858 aaKnown RBP13.73□□□□□ -0.21
BRCA1-213ENST00000476777 CST5P28325 142 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-213ENST00000476777 PLA2G5P39877 138 aa13.73□□□□□ -0.21
BRCA1-213ENST00000476777 IRX5P78411 483 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-213ENST00000476777 ZKSCAN2Q63HK3 967 aa13.73□□□□□ -0.21
BRCA1-213ENST00000476777 MAMDC4Q6UXC1 1216 aa13.73□□□□□ -0.21
BRCA1-213ENST00000476777 ZNF365Q70YC5 407 aa13.73□□□□□ -0.21
BRCA1-213ENST00000476777 GLT1D1Q96MS3 346 aa13.73□□□□□ -0.21
BRCA1-213ENST00000476777 UHRF1Q96T88 793 aaPredicted RBP13.73□□□□□ -0.21
BRCA1-213ENST00000476777 MUC6Q6W4X9 2439 aa13.73□□□□□ -0.21
BRCA1-213ENST00000476777 MCM3APO60318 1980 aa13.72□□□□□ -0.21
BRCA1-213ENST00000476777 TCF20Q9UGU0 1960 aaKnown RBP13.72□□□□□ -0.21
BRCA1-213ENST00000476777 BAZ2AQ9UIF9 1905 aaKnown RBP13.72□□□□□ -0.21
BRCA1-213ENST00000476777 ADCY6O43306 1168 aa13.72□□□□□ -0.21
BRCA1-213ENST00000476777 PRKAB2O43741 272 aa13.72□□□□□ -0.21
BRCA1-213ENST00000476777 CDK8P49336 464 aa13.72□□□□□ -0.21
BRCA1-213ENST00000476777 CCDC85BQ15834 202 aaPredicted RBP13.72□□□□□ -0.21
BRCA1-213ENST00000476777 FAM83BQ5T0W9 1011 aa13.72□□□□□ -0.21
BRCA1-213ENST00000476777 PSRC1Q6PGN9 363 aaPredicted RBP13.72□□□□□ -0.21
BRCA1-213ENST00000476777 TMEM199Q8N511 208 aa13.72□□□□□ -0.21
BRCA1-213ENST00000476777 ARMT1Q9H993 441 aa13.72□□□□□ -0.21
BRCA1-213ENST00000476777 KANSL2Q9H9L4 492 aa13.72□□□□□ -0.21
BRCA1-213ENST00000476777 ZHX1Q9UKY1 873 aaPredicted RBP13.72□□□□□ -0.21
BRCA1-213ENST00000476777 EXOC6BQ9Y2D4 811 aa13.72□□□□□ -0.21
BRCA1-213ENST00000476777 DNAJC25-GNG10A0A024R161 153 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 CYP2D7A0A087X1C5 515 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 A0A0U1RQG5 324 aaPredicted RBP13.71□□□□□ -0.21
BRCA1-213ENST00000476777 ARVCFO00192 962 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 ASGR1P07306 291 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 C6orf222P0C671 652 aaPredicted RBP13.71□□□□□ -0.21
BRCA1-213ENST00000476777 RAB30Q15771 203 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 C12orf60Q5U649 245 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 CEP85Q6P2H3 762 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 ERC1Q8IUD2 1116 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 FAM126BQ8IXS8 530 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 PCSK9Q8NBP7 692 aaKnown RBP13.71□□□□□ -0.21
BRCA1-213ENST00000476777 HERVK_113Q902F9 699 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 TEX13BQ9BXU2 312 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 PPP1R12CQ9BZL4 782 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 UPF3AQ9H1J1 476 aaKnown RBP13.71□□□□□ -0.21
BRCA1-213ENST00000476777 GOPCQ9HD26 462 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 ATP8A2Q9NTI2 1148 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 CXXC1Q9P0U4 656 aaPredicted RBP13.71□□□□□ -0.21
BRCA1-213ENST00000476777 MSRAQ9UJ68 235 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 RIPK3Q9Y572 518 aa13.71□□□□□ -0.21
BRCA1-213ENST00000476777 GOLIM4O00461 696 aa13.7□□□□□ -0.22
BRCA1-213ENST00000476777 IGFBP4P22692 258 aa13.7□□□□□ -0.22
BRCA1-213ENST00000476777 GJA9P57773 515 aa13.7□□□□□ -0.22
BRCA1-213ENST00000476777 ACVR2BQ13705 512 aa13.7□□□□□ -0.22
BRCA1-213ENST00000476777 SLFNL1Q499Z3 407 aa13.7□□□□□ -0.22
BRCA1-213ENST00000476777 SNRNP48Q6IEG0 339 aaKnown RBP13.7□□□□□ -0.22
BRCA1-213ENST00000476777 C16orf86Q6ZW13 317 aa13.7□□□□□ -0.22
BRCA1-213ENST00000476777 ZNF467Q7Z7K2 595 aaPredicted RBP13.7□□□□□ -0.22
BRCA1-213ENST00000476777 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.7□□□□□ -0.22
BRCA1-213ENST00000476777 VTI1AQ96AJ9 217 aa13.7□□□□□ -0.22
BRCA1-213ENST00000476777 FAM122AQ96E09 287 aa13.7□□□□□ -0.22
BRCA1-213ENST00000476777 DDX11Q96FC9 970 aa13.7□□□□□ -0.22
BRCA1-213ENST00000476777 SLF1Q9BQI6 1058 aa13.7□□□□□ -0.22
BRCA1-213ENST00000476777 IL1RAPL2Q9NP60 686 aa13.7□□□□□ -0.22
BRCA1-213ENST00000476777 IL23AQ9NPF7 189 aa13.7□□□□□ -0.22
BRCA1-213ENST00000476777 YBX2Q9Y2T7 364 aaKnown RBP13.7□□□□□ -0.22
BRCA1-213ENST00000476777 USP17L12C9JPN9 530 aa13.69□□□□□ -0.22
BRCA1-213ENST00000476777 USP17L21D6R901 530 aa13.69□□□□□ -0.22
BRCA1-213ENST00000476777 CTAGE5O15320 804 aa13.69□□□□□ -0.22
BRCA1-213ENST00000476777 RAD21O60216 631 aa13.69□□□□□ -0.22
BRCA1-213ENST00000476777 MBD4O95243 580 aa13.69□□□□□ -0.22
BRCA1-213ENST00000476777 CD4P01730 458 aa13.69□□□□□ -0.22
BRCA1-213ENST00000476777 RLBP1P12271 317 aa13.69□□□□□ -0.22
BRCA1-213ENST00000476777 CYP2C18P33260 490 aa13.69□□□□□ -0.22
BRCA1-213ENST00000476777 CCDC144BQ3MJ40 725 aa13.69□□□□□ -0.22
BRCA1-213ENST00000476777 GNASQ5JWF2 1037 aa13.69□□□□□ -0.22
BRCA1-213ENST00000476777 ITPRIPQ8IWB1 547 aa13.69□□□□□ -0.22
BRCA1-213ENST00000476777 FGD4Q96M96 766 aa13.69□□□□□ -0.22
BRCA1-213ENST00000476777 DNAJC2Q99543 621 aaKnown RBP13.69□□□□□ -0.22
BRCA1-213ENST00000476777 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.69□□□□□ -0.22
BRCA1-213ENST00000476777 NKX2-4Q9H2Z4 354 aa13.69□□□□□ -0.22
BRCA1-213ENST00000476777 ABHD16BQ9H3Z7 469 aa13.69□□□□□ -0.22
BRCA1-213ENST00000476777 SPC25Q9HBM1 224 aa13.69□□□□□ -0.22
BRCA1-213ENST00000476777 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms