RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 TJAP1Q5JTD0 557 aa13.32□□□□□ -0.28
EXOSC1-208ENST00000476234 CCSAPQ6IQ19 270 aaPredicted RBP13.32□□□□□ -0.28
EXOSC1-208ENST00000476234 CLEC10AQ8IUN9 316 aa13.32□□□□□ -0.28
EXOSC1-208ENST00000476234 REPS2Q8NFH8 660 aa13.32□□□□□ -0.28
EXOSC1-208ENST00000476234 OTUD7AQ8TE49 926 aaPredicted RBP13.32□□□□□ -0.28
EXOSC1-208ENST00000476234 ARHGEF10LQ9HCE6 1279 aa13.32□□□□□ -0.28
EXOSC1-208ENST00000476234 MYH7P12883 1935 aa13.32□□□□□ -0.28
EXOSC1-208ENST00000476234 BAZ2AQ9UIF9 1905 aaKnown RBP13.32□□□□□ -0.28
EXOSC1-208ENST00000476234 CYP2D7A0A087X1C5 515 aa13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 PGK2P07205 417 aa13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 AKR1A1P14550 325 aa13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 AKR1B1P15121 316 aa13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 DNAJB2P25686 324 aa13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 ICA1Q05084 483 aa13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 RASIP1Q5U651 963 aa13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 SPICE1Q8N0Z3 855 aa13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 MSL3Q8N5Y2 521 aaKnown RBP13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 KLHDC9Q8NEP7 349 aa13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 DYNLL2Q96FJ2 89 aa13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 CCDC17Q96LX7 622 aa13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 CRBNQ96SW2 442 aa13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 MMP19Q99542 508 aa13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 TMEM39AQ9NV64 488 aa13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 TBX21Q9UL17 535 aa13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 ZNF214Q9UL59 606 aaPredicted RBP13.31□□□□□ -0.28
EXOSC1-208ENST00000476234 COL11A1P12107 1806 aaPredicted RBP13.3□□□□□ -0.28
EXOSC1-208ENST00000476234 PLXNA1Q9UIW2 1896 aa13.3□□□□□ -0.28
EXOSC1-208ENST00000476234 MOXD2PA6NHM9 499 aa13.3□□□□□ -0.28
EXOSC1-208ENST00000476234 VWA5AO00534 786 aa13.3□□□□□ -0.28
EXOSC1-208ENST00000476234 PQBP1O60828 265 aaKnown RBP13.3□□□□□ -0.28
EXOSC1-208ENST00000476234 MBD4O95243 580 aa13.3□□□□□ -0.28
EXOSC1-208ENST00000476234 TIMP1P01033 207 aa13.3□□□□□ -0.28
EXOSC1-208ENST00000476234 COPB2P35606 906 aa13.3□□□□□ -0.28
EXOSC1-208ENST00000476234 STAT3P40763 770 aa13.3□□□□□ -0.28
EXOSC1-208ENST00000476234 ACLYP53396 1101 aa13.3□□□□□ -0.28
EXOSC1-208ENST00000476234 KCTD2Q14681 263 aa13.3□□□□□ -0.28
EXOSC1-208ENST00000476234 MAMDC4Q6UXC1 1216 aa13.3□□□□□ -0.28
EXOSC1-208ENST00000476234 PUS7LQ9H0K6 701 aaKnown RBP13.3□□□□□ -0.28
EXOSC1-208ENST00000476234 ZNF576Q9H609 170 aa13.3□□□□□ -0.28
EXOSC1-208ENST00000476234 ATP8A2Q9NTI2 1148 aa13.3□□□□□ -0.28
EXOSC1-208ENST00000476234 DCDC2CA8MYV0 355 aa13.29□□□□□ -0.28
EXOSC1-208ENST00000476234 TNFRSF10AO00220 468 aa13.29□□□□□ -0.28
EXOSC1-208ENST00000476234 CDK7P50613 346 aa13.29□□□□□ -0.28
EXOSC1-208ENST00000476234 C12orf60Q5U649 245 aa13.29□□□□□ -0.28
EXOSC1-208ENST00000476234 C16orf59Q7L2K0 433 aa13.29□□□□□ -0.28
EXOSC1-208ENST00000476234 TIFAQ96CG3 184 aa13.29□□□□□ -0.28
EXOSC1-208ENST00000476234 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.29□□□□□ -0.28
EXOSC1-208ENST00000476234 ECHDC1Q9NTX5 307 aa13.29□□□□□ -0.28
EXOSC1-208ENST00000476234 FBXO28Q9NVF7 368 aa13.29□□□□□ -0.28
EXOSC1-208ENST00000476234 PPP1R9AQ9ULJ8 1098 aa13.29□□□□□ -0.28
EXOSC1-208ENST00000476234 SYNRGQ9UMZ2 1314 aa13.29□□□□□ -0.28
EXOSC1-208ENST00000476234 DNAJC25-GNG10A0A024R161 153 aa13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 SNAI1O95863 264 aaPredicted RBP13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 EEF2P13639 858 aaKnown RBP13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 CST5P28325 142 aaPredicted RBP13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 CDK8P49336 464 aa13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 UBE3CQ15386 1083 aa13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 AKNAD1Q5T1N1 836 aa13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 MFSD5Q6N075 450 aa13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 C16orf86Q6ZW13 317 aa13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 NUP133Q8WUM0 1156 aa13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 LENG1Q96BZ8 264 aaPredicted RBP13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 KANSL2Q9H9L4 492 aa13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 STARD7Q9NQZ5 370 aa13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 CNPY2Q9Y2B0 182 aa13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 MYH8P13535 1937 aa13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 ELP1O95163 1332 aa13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 SYNGAP1Q96PV0 1343 aa13.28□□□□□ -0.28
EXOSC1-208ENST00000476234 DUSP11O75319 330 aaKnown RBP13.27□□□□□ -0.29
EXOSC1-208ENST00000476234 KCNA10Q16322 511 aa13.27□□□□□ -0.29
EXOSC1-208ENST00000476234 TMEM240Q5SV17 173 aa13.27□□□□□ -0.29
EXOSC1-208ENST00000476234 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.27□□□□□ -0.29
EXOSC1-208ENST00000476234 ZNF467Q7Z7K2 595 aaPredicted RBP13.27□□□□□ -0.29
EXOSC1-208ENST00000476234 PI4K2BQ8TCG2 481 aa13.27□□□□□ -0.29
EXOSC1-208ENST00000476234 ATXN2LQ8WWM7 1075 aaKnown RBP13.27□□□□□ -0.29
EXOSC1-208ENST00000476234 OSBP2Q969R2 916 aa13.27□□□□□ -0.29
EXOSC1-208ENST00000476234 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.27□□□□□ -0.29
EXOSC1-208ENST00000476234 FAM184BQ9ULE4 1060 aa13.27□□□□□ -0.29
EXOSC1-208ENST00000476234 GREB1LQ9C091 1923 aaPredicted RBP13.27□□□□□ -0.29
EXOSC1-208ENST00000476234 USP17L12C9JPN9 530 aa13.26□□□□□ -0.29
EXOSC1-208ENST00000476234 USP17L21D6R901 530 aa13.26□□□□□ -0.29
EXOSC1-208ENST00000476234 ATP2A1O14983 1001 aa13.26□□□□□ -0.29
EXOSC1-208ENST00000476234 COL9A1P20849 921 aa13.26□□□□□ -0.29
EXOSC1-208ENST00000476234 NKX3-2P78367 333 aa13.26□□□□□ -0.29
EXOSC1-208ENST00000476234 PPIGQ13427 754 aaKnown RBP eCLIP13.26□□□□□ -0.299e-6■■□□□ 12.8
EXOSC1-208ENST00000476234 MROH7Q68CQ1 1323 aa13.26□□□□□ -0.29
EXOSC1-208ENST00000476234 STRBPQ96SI9 672 aaKnown RBP13.26□□□□□ -0.29
EXOSC1-208ENST00000476234 SALL3Q9BXA9 1300 aa13.26□□□□□ -0.29
EXOSC1-208ENST00000476234 TEX13BQ9BXU2 312 aa13.26□□□□□ -0.29
EXOSC1-208ENST00000476234 PBX4Q9BYU1 374 aa13.26□□□□□ -0.29
EXOSC1-208ENST00000476234 UPF3AQ9H1J1 476 aaKnown RBP13.26□□□□□ -0.29
EXOSC1-208ENST00000476234 MYADML2A6NDP7 307 aa13.25□□□□□ -0.29
EXOSC1-208ENST00000476234 PBX2P40425 430 aa13.25□□□□□ -0.29
EXOSC1-208ENST00000476234 IRX6P78412 446 aaPredicted RBP13.25□□□□□ -0.29
EXOSC1-208ENST00000476234 AAMPQ13685 434 aa13.25□□□□□ -0.29
EXOSC1-208ENST00000476234 FAM83BQ5T0W9 1011 aa13.25□□□□□ -0.29
EXOSC1-208ENST00000476234 CTR9Q6PD62 1173 aa13.25□□□□□ -0.29
EXOSC1-208ENST00000476234 CCDC174Q6PII3 467 aa13.25□□□□□ -0.29
EXOSC1-208ENST00000476234 KBTBD3Q8NAB2 608 aa13.25□□□□□ -0.29
EXOSC1-208ENST00000476234 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms