RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 UBE2OQ9C0C9 1292 aaKnown RBP12.68□□□□□ -0.38
CALD1-217ENST00000475772 RPAP3Q9H6T3 665 aaPredicted RBP12.68□□□□□ -0.38
CALD1-217ENST00000475772 IL1RAPL2Q9NP60 686 aa12.68□□□□□ -0.38
CALD1-217ENST00000475772 FAM217BQ9NTX9 383 aaPredicted RBP12.68□□□□□ -0.38
CALD1-217ENST00000475772 MTMR10Q9NXD2 777 aa12.68□□□□□ -0.38
CALD1-217ENST00000475772 CUL9Q8IWT3 2517 aa12.68□□□□□ -0.38
CALD1-217ENST00000475772 BAZ2AQ9UIF9 1905 aaKnown RBP12.68□□□□□ -0.38
CALD1-217ENST00000475772 NAV1Q8NEY1 1877 aa12.68□□□□□ -0.38
CALD1-217ENST00000475772 TCRBV5S4A2TA0A5A2 114 aa12.67□□□□□ -0.38
CALD1-217ENST00000475772 SMIM22K7EJ46 135 aa12.67□□□□□ -0.38
CALD1-217ENST00000475772 CYP2C19P33261 490 aa12.67□□□□□ -0.38
CALD1-217ENST00000475772 SLFNL1Q499Z3 407 aa12.67□□□□□ -0.38
CALD1-217ENST00000475772 AACSQ86V21 672 aa12.67□□□□□ -0.38
CALD1-217ENST00000475772 CERS3Q8IU89 383 aa12.67□□□□□ -0.38
CALD1-217ENST00000475772 PARP9Q8IXQ6 854 aa12.67□□□□□ -0.38
CALD1-217ENST00000475772 FEZ1Q99689 392 aa12.67□□□□□ -0.38
CALD1-217ENST00000475772 SENP6Q9GZR1 1112 aaPredicted RBP12.67□□□□□ -0.38
CALD1-217ENST00000475772 CABP5Q9NP86 173 aa12.67□□□□□ -0.38
CALD1-217ENST00000475772 PARP14Q460N5 1801 aa12.67□□□□□ -0.38
CALD1-217ENST00000475772 MAGEB6P1A0A0J9YX57 407 aa12.66□□□□□ -0.38
CALD1-217ENST00000475772 POLR3DP05423 398 aaPredicted RBP12.66□□□□□ -0.38
CALD1-217ENST00000475772 CYP2D6P10635 497 aa12.66□□□□□ -0.38
CALD1-217ENST00000475772 CCNA1P78396 465 aa12.66□□□□□ -0.38
CALD1-217ENST00000475772 WDR78Q5VTH9 848 aa12.66□□□□□ -0.38
CALD1-217ENST00000475772 TMED8Q6PL24 325 aaPredicted RBP12.66□□□□□ -0.38
CALD1-217ENST00000475772 FTSJ3Q8IY81 847 aaKnown RBP12.66□□□□□ -0.38
CALD1-217ENST00000475772 RHPN1Q8TCX5 695 aa12.66□□□□□ -0.38
CALD1-217ENST00000475772 PANK1Q8TE04 598 aa12.66□□□□□ -0.38
CALD1-217ENST00000475772 SDR42E1Q8WUS8 393 aa12.66□□□□□ -0.38
CALD1-217ENST00000475772 LPAR1Q92633 364 aa12.66□□□□□ -0.38
CALD1-217ENST00000475772 MOV10L1Q9BXT6 1211 aaKnown RBP12.66□□□□□ -0.38
CALD1-217ENST00000475772 DCP1AQ9NPI6 582 aaPredicted RBP12.66□□□□□ -0.38
CALD1-217ENST00000475772 DDX20Q9UHI6 824 aaKnown RBP12.66□□□□□ -0.38
CALD1-217ENST00000475772 MYH8P13535 1937 aa12.66□□□□□ -0.38
CALD1-217ENST00000475772 ZNF532Q9HCE3 1301 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 COL11A1P12107 1806 aaPredicted RBP12.65□□□□□ -0.38
CALD1-217ENST00000475772 COBLO75128 1261 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 CFHP08603 1231 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 CYBAP13498 195 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 CD46P15529 392 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 PDE6AP16499 860 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 ATP2B2Q01814 1243 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 COG2Q14746 738 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 SLC9C2Q5TAH2 1124 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 MFSD14CQ5VZR4 134 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 SIRT2Q8IXJ6 389 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 RDH13Q8NBN7 331 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 SLC44A5Q8NCS7 719 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 DYNLL2Q96FJ2 89 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 MCM9Q9NXL9 1143 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 STXBP5LQ9Y2K9 1186 aa12.65□□□□□ -0.38
CALD1-217ENST00000475772 PRKAB2O43741 272 aa12.64□□□□□ -0.39
CALD1-217ENST00000475772 GLRX3O76003 335 aaKnown RBP12.64□□□□□ -0.39
CALD1-217ENST00000475772 CHGBP05060 677 aa12.64□□□□□ -0.39
CALD1-217ENST00000475772 PRKCSHP14314 528 aaPredicted RBP12.64□□□□□ -0.39
CALD1-217ENST00000475772 CNGA1P29973 690 aa12.64□□□□□ -0.39
CALD1-217ENST00000475772 ERC1Q8IUD2 1116 aa12.64□□□□□ -0.39
CALD1-217ENST00000475772 LCORLQ8N3X6 602 aa12.64□□□□□ -0.39
CALD1-217ENST00000475772 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.64□□□□□ -0.39
CALD1-217ENST00000475772 SPATC1LQ9H0A9 340 aa12.64□□□□□ -0.39
CALD1-217ENST00000475772 CWC22Q9HCG8 908 aaKnown RBP12.64□□□□□ -0.39
CALD1-217ENST00000475772 HOXC10Q9NYD6 342 aa12.64□□□□□ -0.39
CALD1-217ENST00000475772 A0A0G2JMZ2 1700 aa12.64□□□□□ -0.39
CALD1-217ENST00000475772 LTBP2Q14767 1821 aa12.64□□□□□ -0.39
CALD1-217ENST00000475772 EYSQ5T1H1 3165 aa12.64□□□□□ -0.39
CALD1-217ENST00000475772 ZNF236Q9UL36 1845 aa12.63□□□□□ -0.39
CALD1-217ENST00000475772 DNM1LO00429 736 aa12.63□□□□□ -0.39
CALD1-217ENST00000475772 AKR1B1P15121 316 aa12.63□□□□□ -0.39
CALD1-217ENST00000475772 ERCC3P19447 782 aa12.63□□□□□ -0.39
CALD1-217ENST00000475772 ADORA2AP29274 412 aa12.63□□□□□ -0.39
CALD1-217ENST00000475772 PRAMEF19Q5SWL8 479 aa12.63□□□□□ -0.39
CALD1-217ENST00000475772 GJC2Q5T442 439 aaPredicted RBP12.63□□□□□ -0.39
CALD1-217ENST00000475772 ANO1Q5XXA6 986 aa12.63□□□□□ -0.39
CALD1-217ENST00000475772 CLEC10AQ8IUN9 316 aa12.63□□□□□ -0.39
CALD1-217ENST00000475772 IVNS1ABPQ9Y6Y0 642 aa12.63□□□□□ -0.39
CALD1-217ENST00000475772 CDH23Q9H251 3354 aa12.63□□□□□ -0.39
CALD1-217ENST00000475772 VCANP13611 3396 aa12.63□□□□□ -0.39
CALD1-217ENST00000475772 GOLIM4O00461 696 aa12.62□□□□□ -0.39
CALD1-217ENST00000475772 MPHOSPH10O00566 681 aaKnown RBP12.62□□□□□ -0.39
CALD1-217ENST00000475772 ACTN4O43707 911 aaKnown RBP12.62□□□□□ -0.39
CALD1-217ENST00000475772 STRNO43815 780 aa12.62□□□□□ -0.39
CALD1-217ENST00000475772 MSCO60682 206 aa12.62□□□□□ -0.39
CALD1-217ENST00000475772 SSTR3P32745 418 aaPredicted RBP12.62□□□□□ -0.39
CALD1-217ENST00000475772 GCGRP47871 477 aa12.62□□□□□ -0.39
CALD1-217ENST00000475772 HNRNPUQ00839 825 aaKnown RBP eCLIP12.62□□□□□ -0.39
CALD1-217ENST00000475772 TTF1Q15361 905 aaPredicted RBP12.62□□□□□ -0.39
CALD1-217ENST00000475772 KMT5BQ4FZB7 885 aa12.62□□□□□ -0.39
CALD1-217ENST00000475772 OLFML2BQ68BL8 750 aa12.62□□□□□ -0.39
CALD1-217ENST00000475772 SLC39A5Q6ZMH5 540 aa12.62□□□□□ -0.39
CALD1-217ENST00000475772 DPP9Q86TI2 863 aa12.62□□□□□ -0.39
CALD1-217ENST00000475772 SHCBP1Q8NEM2 672 aa12.62□□□□□ -0.39
CALD1-217ENST00000475772 GUCD1Q96NT3 240 aa12.62□□□□□ -0.39
CALD1-217ENST00000475772 PRR14Q9BWN1 585 aa12.62□□□□□ -0.39
CALD1-217ENST00000475772 CRNKL1Q9BZJ0 848 aaKnown RBP12.62□□□□□ -0.39
CALD1-217ENST00000475772 ARMT1Q9H993 441 aa12.62□□□□□ -0.39
CALD1-217ENST00000475772 TMX2Q9Y320 296 aa12.62□□□□□ -0.39
CALD1-217ENST00000475772 PRUNE2Q8WUY3 3088 aa12.62□□□□□ -0.39
CALD1-217ENST00000475772 PLXNA1Q9UIW2 1896 aa12.61□□□□□ -0.39
CALD1-217ENST00000475772 MYH7P12883 1935 aa12.61□□□□□ -0.39
CALD1-217ENST00000475772 CYP2D7A0A087X1C5 515 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms