RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 SYNGAP1Q96PV0 1343 aa21.7■■□□□ 1.06
RNF220-212ENST00000475378 CSF2RAP15509 400 aa21.69■■□□□ 1.06
RNF220-212ENST00000475378 COPB2P35606 906 aa21.69■■□□□ 1.06
RNF220-212ENST00000475378 IRX5P78411 483 aaPredicted RBP21.69■■□□□ 1.06
RNF220-212ENST00000475378 CCDC174Q6PII3 467 aa21.69■■□□□ 1.06
RNF220-212ENST00000475378 MAMDC4Q6UXC1 1216 aa21.69■■□□□ 1.06
RNF220-212ENST00000475378 FAM184BQ9ULE4 1060 aa21.69■■□□□ 1.06
RNF220-212ENST00000475378 ZNF532Q9HCE3 1301 aa21.69■■□□□ 1.06
RNF220-212ENST00000475378 SMIM22K7EJ46 135 aa21.68■■□□□ 1.06
RNF220-212ENST00000475378 DUSP11O75319 330 aaKnown RBP21.68■■□□□ 1.06
RNF220-212ENST00000475378 TTF1Q15361 905 aaPredicted RBP21.68■■□□□ 1.06
RNF220-212ENST00000475378 ZNF365Q70YC5 407 aa21.68■■□□□ 1.06
RNF220-212ENST00000475378 CCDC17Q96LX7 622 aa21.68■■□□□ 1.06
RNF220-212ENST00000475378 MYH7P12883 1935 aa21.67■■□□□ 1.06
RNF220-212ENST00000475378 DNAJC25-GNG10A0A024R161 153 aa21.67■■□□□ 1.06
RNF220-212ENST00000475378 ADCY6O43306 1168 aa21.67■■□□□ 1.06
RNF220-212ENST00000475378 ACRP10323 421 aa21.67■■□□□ 1.06
RNF220-212ENST00000475378 EEF2P13639 858 aaKnown RBP21.67■■□□□ 1.06
RNF220-212ENST00000475378 CCDC85BQ15834 202 aaPredicted RBP21.67■■□□□ 1.06
RNF220-212ENST00000475378 PSRC1Q6PGN9 363 aaPredicted RBP21.67■■□□□ 1.06
RNF220-212ENST00000475378 AACSQ86V21 672 aa21.67■■□□□ 1.06
RNF220-212ENST00000475378 TMEM199Q8N511 208 aa21.67■■□□□ 1.06
RNF220-212ENST00000475378 GLT1D1Q96MS3 346 aa21.67■■□□□ 1.06
RNF220-212ENST00000475378 TRANK1O15050 2925 aa21.67■■□□□ 1.06
RNF220-212ENST00000475378 ARVCFO00192 962 aa21.66■■□□□ 1.06
RNF220-212ENST00000475378 ASGR1P07306 291 aa21.66■■□□□ 1.06
RNF220-212ENST00000475378 CDK8P49336 464 aa21.66■■□□□ 1.06
RNF220-212ENST00000475378 RAB30Q15771 203 aa21.66■■□□□ 1.06
RNF220-212ENST00000475378 FAM126BQ8IXS8 530 aa21.66■■□□□ 1.06
RNF220-212ENST00000475378 HERVK_113Q902F9 699 aa21.66■■□□□ 1.06
RNF220-212ENST00000475378 UPF3AQ9H1J1 476 aaKnown RBP21.66■■□□□ 1.06
RNF220-212ENST00000475378 ZKSCAN2Q63HK3 967 aa21.65■■□□□ 1.06
RNF220-212ENST00000475378 PCSK9Q8NBP7 692 aaKnown RBP21.65■■□□□ 1.06
RNF220-212ENST00000475378 FAM122AQ96E09 287 aa21.65■■□□□ 1.06
RNF220-212ENST00000475378 PPP1R12CQ9BZL4 782 aa21.65■■□□□ 1.06
RNF220-212ENST00000475378 ARMT1Q9H993 441 aa21.65■■□□□ 1.06
RNF220-212ENST00000475378 CXXC1Q9P0U4 656 aaPredicted RBP21.65■■□□□ 1.06
RNF220-212ENST00000475378 ZHX1Q9UKY1 873 aaPredicted RBP21.65■■□□□ 1.06
RNF220-212ENST00000475378 A0A0U1RQG5 324 aaPredicted RBP21.64■■□□□ 1.05
RNF220-212ENST00000475378 PRKAB2O43741 272 aa21.64■■□□□ 1.05
RNF220-212ENST00000475378 IGFBP4P22692 258 aa21.64■■□□□ 1.05
RNF220-212ENST00000475378 FAM83BQ5T0W9 1011 aa21.64■■□□□ 1.05
RNF220-212ENST00000475378 C12orf60Q5U649 245 aa21.64■■□□□ 1.05
RNF220-212ENST00000475378 C16orf86Q6ZW13 317 aa21.64■■□□□ 1.05
RNF220-212ENST00000475378 ZNF467Q7Z7K2 595 aaPredicted RBP21.64■■□□□ 1.05
RNF220-212ENST00000475378 NKX2-4Q9H2Z4 354 aa21.64■■□□□ 1.05
RNF220-212ENST00000475378 KANSL2Q9H9L4 492 aa21.64■■□□□ 1.05
RNF220-212ENST00000475378 IL23AQ9NPF7 189 aa21.64■■□□□ 1.05
RNF220-212ENST00000475378 ATP8A2Q9NTI2 1148 aa21.64■■□□□ 1.05
RNF220-212ENST00000475378 MSRAQ9UJ68 235 aa21.64■■□□□ 1.05
RNF220-212ENST00000475378 EXOC6BQ9Y2D4 811 aa21.64■■□□□ 1.05
RNF220-212ENST00000475378 YBX2Q9Y2T7 364 aaKnown RBP21.64■■□□□ 1.05
RNF220-212ENST00000475378 RIPK3Q9Y572 518 aa21.64■■□□□ 1.05
RNF220-212ENST00000475378 MYH4Q9Y623 1939 aa21.63■■□□□ 1.05
RNF220-212ENST00000475378 CYP2D7A0A087X1C5 515 aa21.63■■□□□ 1.05
RNF220-212ENST00000475378 CTAGE5O15320 804 aa21.63■■□□□ 1.05
RNF220-212ENST00000475378 CD4P01730 458 aa21.63■■□□□ 1.05
RNF220-212ENST00000475378 C6orf222P0C671 652 aaPredicted RBP21.63■■□□□ 1.05
RNF220-212ENST00000475378 GJA9P57773 515 aa21.63■■□□□ 1.05
RNF220-212ENST00000475378 ACVR2BQ13705 512 aa21.63■■□□□ 1.05
RNF220-212ENST00000475378 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.63■■□□□ 1.05
RNF220-212ENST00000475378 FGD4Q96M96 766 aa21.63■■□□□ 1.05
RNF220-212ENST00000475378 TEX13BQ9BXU2 312 aa21.63■■□□□ 1.05
RNF220-212ENST00000475378 GOPCQ9HD26 462 aa21.63■■□□□ 1.05
RNF220-212ENST00000475378 SNRNP48Q6IEG0 339 aaKnown RBP21.62■■□□□ 1.05
RNF220-212ENST00000475378 CEP85Q6P2H3 762 aa21.62■■□□□ 1.05
RNF220-212ENST00000475378 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.62■■□□□ 1.05
RNF220-212ENST00000475378 ERC1Q8IUD2 1116 aa21.62■■□□□ 1.05
RNF220-212ENST00000475378 NECAB3Q96P71 396 aaPredicted RBP21.62■■□□□ 1.05
RNF220-212ENST00000475378 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.62■■□□□ 1.05
RNF220-212ENST00000475378 PRRC2BQ5JSZ5 2229 aaKnown RBP21.61■■□□□ 1.05
RNF220-212ENST00000475378 GOLIM4O00461 696 aa21.61■■□□□ 1.05
RNF220-212ENST00000475378 BMP1P13497 986 aa21.61■■□□□ 1.05
RNF220-212ENST00000475378 CYP2C18P33260 490 aa21.61■■□□□ 1.05
RNF220-212ENST00000475378 NKX3-2P78367 333 aa21.61■■□□□ 1.05
RNF220-212ENST00000475378 SLFNL1Q499Z3 407 aa21.61■■□□□ 1.05
RNF220-212ENST00000475378 VTI1AQ96AJ9 217 aa21.61■■□□□ 1.05
RNF220-212ENST00000475378 DDX11Q96FC9 970 aa21.61■■□□□ 1.05
RNF220-212ENST00000475378 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.61■■□□□ 1.05
RNF220-212ENST00000475378 ABHD16BQ9H3Z7 469 aa21.61■■□□□ 1.05
RNF220-212ENST00000475378 SLC28A3Q9HAS3 691 aa21.61■■□□□ 1.05
RNF220-212ENST00000475378 USP17L12C9JPN9 530 aa21.6■■□□□ 1.05
RNF220-212ENST00000475378 USP17L21D6R901 530 aa21.6■■□□□ 1.05
RNF220-212ENST00000475378 TLR3O15455 904 aaKnown RBP21.6■■□□□ 1.05
RNF220-212ENST00000475378 MBD4O95243 580 aa21.6■■□□□ 1.05
RNF220-212ENST00000475378 HOXD11P31277 338 aaPredicted RBP21.6■■□□□ 1.05
RNF220-212ENST00000475378 CCDC144BQ3MJ40 725 aa21.6■■□□□ 1.05
RNF220-212ENST00000475378 GNASQ5JWF2 1037 aa21.6■■□□□ 1.05
RNF220-212ENST00000475378 SLC43A3Q8NBI5 491 aa21.6■■□□□ 1.05
RNF220-212ENST00000475378 IL27Q8NEV9 243 aa21.6■■□□□ 1.05
RNF220-212ENST00000475378 DNAJC2Q99543 621 aaKnown RBP21.6■■□□□ 1.05
RNF220-212ENST00000475378 SLF1Q9BQI6 1058 aa21.6■■□□□ 1.05
RNF220-212ENST00000475378 KATNBL1Q9H079 304 aa21.6■■□□□ 1.05
RNF220-212ENST00000475378 SPC25Q9HBM1 224 aa21.6■■□□□ 1.05
RNF220-212ENST00000475378 IL1RAPL2Q9NP60 686 aa21.6■■□□□ 1.05
RNF220-212ENST00000475378 ZBED9Q6R2W3 1325 aa21.59■■□□□ 1.05
RNF220-212ENST00000475378 LRRC37A2A6NM11 1700 aa21.59■■□□□ 1.05
RNF220-212ENST00000475378 APBB1O00213 710 aa21.59■■□□□ 1.05
RNF220-212ENST00000475378 ATP2A1O14983 1001 aa21.59■■□□□ 1.05
RNF220-212ENST00000475378 FGBP02675 491 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms