RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 TSPY2A6NKD2 308 aa24.15■■□□□ 1.46
PDLIM4-206ENST00000474421 KBTBD13C9JR72 458 aa24.15■■□□□ 1.46
PDLIM4-206ENST00000474421 PGK2P07205 417 aa24.15■■□□□ 1.46
PDLIM4-206ENST00000474421 BMP3P12645 472 aa24.15■■□□□ 1.46
PDLIM4-206ENST00000474421 ALX1Q15699 326 aa24.15■■□□□ 1.46
PDLIM4-206ENST00000474421 KIFC2Q96AC6 838 aa24.15■■□□□ 1.46
PDLIM4-206ENST00000474421 TINF2Q9BSI4 451 aa24.15■■□□□ 1.46
PDLIM4-206ENST00000474421 SLC38A10Q9HBR0 1119 aa24.15■■□□□ 1.46
PDLIM4-206ENST00000474421 ANAPC4Q9UJX5 808 aa24.15■■□□□ 1.46
PDLIM4-206ENST00000474421 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.15■■□□□ 1.46
PDLIM4-206ENST00000474421 FOXP2O15409 715 aa24.14■■□□□ 1.45
PDLIM4-206ENST00000474421 SYN1P17600 705 aa24.14■■□□□ 1.45
PDLIM4-206ENST00000474421 OAZ1P54368 228 aa24.14■■□□□ 1.45
PDLIM4-206ENST00000474421 MCMDC2Q4G0Z9 681 aa24.14■■□□□ 1.45
PDLIM4-206ENST00000474421 PRAMEF19Q5SWL8 479 aa24.14■■□□□ 1.45
PDLIM4-206ENST00000474421 SMC5Q8IY18 1101 aa24.14■■□□□ 1.45
PDLIM4-206ENST00000474421 MSL3Q8N5Y2 521 aaKnown RBP24.14■■□□□ 1.45
PDLIM4-206ENST00000474421 LNPKQ9C0E8 428 aa24.14■■□□□ 1.45
PDLIM4-206ENST00000474421 SMCHD1A6NHR9 2005 aa24.13■■□□□ 1.45
PDLIM4-206ENST00000474421 CPXCR1Q8N123 301 aa24.13■■□□□ 1.45
PDLIM4-206ENST00000474421 CHURC1Q8WUH1 139 aa24.13■■□□□ 1.45
PDLIM4-206ENST00000474421 DDX11Q96FC9 970 aa24.13■■□□□ 1.45
PDLIM4-206ENST00000474421 GMCL1Q96IK5 515 aa24.13■■□□□ 1.45
PDLIM4-206ENST00000474421 FBXO40Q9UH90 709 aa24.13■■□□□ 1.45
PDLIM4-206ENST00000474421 SZT2Q5T011 3432 aa24.13■■□□□ 1.45
PDLIM4-206ENST00000474421 MAGEA10P43363 369 aaPredicted RBP24.12■■□□□ 1.45
PDLIM4-206ENST00000474421 STAT2P52630 851 aa24.12■■□□□ 1.45
PDLIM4-206ENST00000474421 CTDSPL2Q05D32 466 aa24.12■■□□□ 1.45
PDLIM4-206ENST00000474421 GJC2Q5T442 439 aaPredicted RBP24.12■■□□□ 1.45
PDLIM4-206ENST00000474421 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.12■■□□□ 1.45
PDLIM4-206ENST00000474421 FAM160B2Q86V87 743 aa24.12■■□□□ 1.45
PDLIM4-206ENST00000474421 ISY1Q9ULR0 285 aaKnown RBP24.12■■□□□ 1.45
PDLIM4-206ENST00000474421 STX8Q9UNK0 236 aa24.12■■□□□ 1.45
PDLIM4-206ENST00000474421 CNPY2Q9Y2B0 182 aa24.12■■□□□ 1.45
PDLIM4-206ENST00000474421 TRIM6-TRIM34B2RNG4 842 aa24.11■■□□□ 1.45
PDLIM4-206ENST00000474421 ORC4O43929 436 aa24.11■■□□□ 1.45
PDLIM4-206ENST00000474421 RARBP10826 455 aa24.11■■□□□ 1.45
PDLIM4-206ENST00000474421 SLC1A4P43007 532 aa24.11■■□□□ 1.45
PDLIM4-206ENST00000474421 VPS53Q5VIR6 699 aa24.11■■□□□ 1.45
PDLIM4-206ENST00000474421 ANO1Q5XXA6 986 aa24.11■■□□□ 1.45
PDLIM4-206ENST00000474421 CHST13Q8NET6 341 aa24.11■■□□□ 1.45
PDLIM4-206ENST00000474421 RAVER2Q9HCJ3 691 aaKnown RBP24.11■■□□□ 1.45
PDLIM4-206ENST00000474421 RIPK3Q9Y572 518 aa24.11■■□□□ 1.45
PDLIM4-206ENST00000474421 TMEM232C9JQI7 657 aa24.1■■□□□ 1.45
PDLIM4-206ENST00000474421 RANBP6O60518 1105 aaKnown RBP24.1■■□□□ 1.45
PDLIM4-206ENST00000474421 SLC4A3P48751 1232 aa24.1■■□□□ 1.45
PDLIM4-206ENST00000474421 B4GALNT3Q6L9W6 998 aa24.1■■□□□ 1.45
PDLIM4-206ENST00000474421 STAG1Q8WVM7 1258 aa24.1■■□□□ 1.45
PDLIM4-206ENST00000474421 FAM227BQ96M60 508 aa24.1■■□□□ 1.45
PDLIM4-206ENST00000474421 ZMYM6O95789 1325 aa24.1■■□□□ 1.45
PDLIM4-206ENST00000474421 SYNGAP1Q96PV0 1343 aa24.1■■□□□ 1.45
PDLIM4-206ENST00000474421 DNAJC25-GNG10A0A024R161 153 aa24.09■■□□□ 1.45
PDLIM4-206ENST00000474421 A0A0D9SFI3 127 aa24.09■■□□□ 1.45
PDLIM4-206ENST00000474421 PLA2G6O60733 806 aa24.09■■□□□ 1.45
PDLIM4-206ENST00000474421 MYCNP04198 464 aaPredicted RBP24.09■■□□□ 1.45
PDLIM4-206ENST00000474421 FGRP09769 529 aa24.09■■□□□ 1.45
PDLIM4-206ENST00000474421 ATN1P54259 1190 aaPredicted RBP24.09■■□□□ 1.45
PDLIM4-206ENST00000474421 MFAP1P55081 439 aaKnown RBP24.09■■□□□ 1.45
PDLIM4-206ENST00000474421 IKQ13123 557 aaPredicted RBP24.09■■□□□ 1.45
PDLIM4-206ENST00000474421 LRRC41Q15345 812 aa24.09■■□□□ 1.45
PDLIM4-206ENST00000474421 ZNF467Q7Z7K2 595 aaPredicted RBP24.09■■□□□ 1.45
PDLIM4-206ENST00000474421 CHD1LQ86WJ1 897 aa24.09■■□□□ 1.45
PDLIM4-206ENST00000474421 ANKRD35Q8N283 1001 aa24.09■■□□□ 1.45
PDLIM4-206ENST00000474421 UBE2OQ9C0C9 1292 aaKnown RBP24.09■■□□□ 1.45
PDLIM4-206ENST00000474421 XPNPEP3Q9NQH7 507 aa24.09■■□□□ 1.45
PDLIM4-206ENST00000474421 LAMA3Q16787 3333 aa24.09■■□□□ 1.45
PDLIM4-206ENST00000474421 FGAP02671 866 aa24.08■■□□□ 1.45
PDLIM4-206ENST00000474421 AKR1A1P14550 325 aa24.08■■□□□ 1.45
PDLIM4-206ENST00000474421 MCCP23508 829 aa24.08■■□□□ 1.45
PDLIM4-206ENST00000474421 RTP1P59025 263 aa24.08■■□□□ 1.45
PDLIM4-206ENST00000474421 MAMDC4Q6UXC1 1216 aa24.08■■□□□ 1.45
PDLIM4-206ENST00000474421 RNF180Q86T96 592 aa24.08■■□□□ 1.45
PDLIM4-206ENST00000474421 RILPL2Q969X0 211 aa24.08■■□□□ 1.45
PDLIM4-206ENST00000474421 IL17RBQ9NRM6 502 aa24.08■■□□□ 1.45
PDLIM4-206ENST00000474421 PRKAG2Q9UGJ0 569 aa24.08■■□□□ 1.45
PDLIM4-206ENST00000474421 ZNF865P0CJ78 1059 aaPredicted RBP24.07■■□□□ 1.44
PDLIM4-206ENST00000474421 HSPD1P10809 573 aaKnown RBP24.07■■□□□ 1.44
PDLIM4-206ENST00000474421 NUCB1Q02818 461 aa24.07■■□□□ 1.44
PDLIM4-206ENST00000474421 NMIQ13287 307 aaPredicted RBP24.07■■□□□ 1.44
PDLIM4-206ENST00000474421 RCSD1Q6JBY9 416 aa24.07■■□□□ 1.44
PDLIM4-206ENST00000474421 SLC39A5Q6ZMH5 540 aa24.07■■□□□ 1.44
PDLIM4-206ENST00000474421 TDHQ8IZJ6 230 aa24.07■■□□□ 1.44
PDLIM4-206ENST00000474421 LBHD1Q9BQE6 289 aaPredicted RBP24.07■■□□□ 1.44
PDLIM4-206ENST00000474421 OSBPL3Q9H4L5 887 aa24.07■■□□□ 1.44
PDLIM4-206ENST00000474421 INCENPQ9NQS7 918 aa24.07■■□□□ 1.44
PDLIM4-206ENST00000474421 TOMM22Q9NS69 142 aa24.07■■□□□ 1.44
PDLIM4-206ENST00000474421 CCDC171Q6TFL3 1326 aa24.07■■□□□ 1.44
PDLIM4-206ENST00000474421 PCP11498 1178 aaKnown RBP24.06■■□□□ 1.44
PDLIM4-206ENST00000474421 NOVP48745 357 aa24.06■■□□□ 1.44
PDLIM4-206ENST00000474421 TKFCQ3LXA3 575 aa24.06■■□□□ 1.44
PDLIM4-206ENST00000474421 NMT2O60551 498 aa24.05■■□□□ 1.44
PDLIM4-206ENST00000474421 IGHDP01880 384 aa24.05■■□□□ 1.44
PDLIM4-206ENST00000474421 TAL1P17542 331 aaPredicted RBP24.05■■□□□ 1.44
PDLIM4-206ENST00000474421 ADCYAP1R1P41586 468 aa24.05■■□□□ 1.44
PDLIM4-206ENST00000474421 SNX17Q15036 470 aa24.05■■□□□ 1.44
PDLIM4-206ENST00000474421 PLEKHM2Q8IWE5 1019 aa24.05■■□□□ 1.44
PDLIM4-206ENST00000474421 EXOC6Q8TAG9 804 aa24.05■■□□□ 1.44
PDLIM4-206ENST00000474421 ACAD9Q9H845 621 aa24.05■■□□□ 1.44
PDLIM4-206ENST00000474421 FAM184BQ9ULE4 1060 aa24.05■■□□□ 1.44
PDLIM4-206ENST00000474421 PHF24Q9UPV7 400 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms