RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 DSCC1Q9BVC3 393 aa24.18■■□□□ 1.46
SNX13-206ENST00000474067 TCP11L1Q9NUJ3 509 aa24.18■■□□□ 1.46
SNX13-206ENST00000474067 ZNF214Q9UL59 606 aaPredicted RBP24.18■■□□□ 1.46
SNX13-206ENST00000474067 OGDHLQ9ULD0 1010 aa24.18■■□□□ 1.46
SNX13-206ENST00000474067 CENPFP49454 3210 aa24.18■■□□□ 1.46
SNX13-206ENST00000474067 PLA2G6O60733 806 aa24.17■■□□□ 1.46
SNX13-206ENST00000474067 CCL14Q16627 93 aa24.17■■□□□ 1.46
SNX13-206ENST00000474067 IMMTQ16891 758 aaKnown RBP24.17■■□□□ 1.46
SNX13-206ENST00000474067 RRP12Q5JTH9 1297 aaKnown RBP24.17■■□□□ 1.46
SNX13-206ENST00000474067 RCSD1Q6JBY9 416 aa24.17■■□□□ 1.46
SNX13-206ENST00000474067 KIFC2Q96AC6 838 aa24.17■■□□□ 1.46
SNX13-206ENST00000474067 TTC14Q96N46 770 aa24.17■■□□□ 1.46
SNX13-206ENST00000474067 NRBP1Q9UHY1 535 aa24.17■■□□□ 1.46
SNX13-206ENST00000474067 TRIM32Q13049 653 aa24.16■■□□□ 1.46
SNX13-206ENST00000474067 TTC22Q5TAA0 569 aa24.16■■□□□ 1.46
SNX13-206ENST00000474067 SNRNP48Q6IEG0 339 aaKnown RBP24.16■■□□□ 1.46
SNX13-206ENST00000474067 NUP88Q99567 741 aaPredicted RBP24.16■■□□□ 1.46
SNX13-206ENST00000474067 PNMA2Q9UL42 364 aa24.16■■□□□ 1.46
SNX13-206ENST00000474067 IRX6P78412 446 aaPredicted RBP24.15■■□□□ 1.46
SNX13-206ENST00000474067 IQCA1Q86XH1 822 aa24.15■■□□□ 1.46
SNX13-206ENST00000474067 MSL3Q8N5Y2 521 aaKnown RBP24.15■■□□□ 1.46
SNX13-206ENST00000474067 CHST13Q8NET6 341 aa24.15■■□□□ 1.46
SNX13-206ENST00000474067 REPS2Q8NFH8 660 aa24.15■■□□□ 1.46
SNX13-206ENST00000474067 NPLOC4Q8TAT6 608 aa24.15■■□□□ 1.46
SNX13-206ENST00000474067 DCAF4Q8WV16 495 aa24.15■■□□□ 1.46
SNX13-206ENST00000474067 DDX11Q96FC9 970 aa24.15■■□□□ 1.46
SNX13-206ENST00000474067 SLC38A10Q9HBR0 1119 aa24.15■■□□□ 1.46
SNX13-206ENST00000474067 TMEM232C9JQI7 657 aa24.14■■□□□ 1.45
SNX13-206ENST00000474067 TOP1P11387 765 aaKnown RBP24.14■■□□□ 1.45
SNX13-206ENST00000474067 CNGA1P29973 690 aa24.14■■□□□ 1.45
SNX13-206ENST00000474067 C11orf49Q9H6J7 331 aa24.14■■□□□ 1.45
SNX13-206ENST00000474067 DDX20Q9UHI6 824 aaKnown RBP24.14■■□□□ 1.45
SNX13-206ENST00000474067 COL11A1P12107 1806 aaPredicted RBP24.14■■□□□ 1.45
SNX13-206ENST00000474067 EVI5O60447 810 aa24.13■■□□□ 1.45
SNX13-206ENST00000474067 NOVP48745 357 aa24.13■■□□□ 1.45
SNX13-206ENST00000474067 TKFCQ3LXA3 575 aa24.13■■□□□ 1.45
SNX13-206ENST00000474067 CPXCR1Q8N123 301 aa24.13■■□□□ 1.45
SNX13-206ENST00000474067 PAWRQ96IZ0 340 aaKnown RBP24.13■■□□□ 1.45
SNX13-206ENST00000474067 MAML3Q96JK9 1138 aa24.13■■□□□ 1.45
SNX13-206ENST00000474067 CNNM2Q9H8M5 875 aa24.13■■□□□ 1.45
SNX13-206ENST00000474067 TNRC18O15417 2968 aaPredicted RBP24.12■■□□□ 1.45
SNX13-206ENST00000474067 MCCP23508 829 aa24.12■■□□□ 1.45
SNX13-206ENST00000474067 CCND3P30281 292 aaPredicted RBP24.12■■□□□ 1.45
SNX13-206ENST00000474067 HAND2P61296 217 aa24.12■■□□□ 1.45
SNX13-206ENST00000474067 KRT23Q9C075 422 aa24.12■■□□□ 1.45
SNX13-206ENST00000474067 IL17RBQ9NRM6 502 aa24.12■■□□□ 1.45
SNX13-206ENST00000474067 CYP2C19P33261 490 aa24.11■■□□□ 1.45
SNX13-206ENST00000474067 CCDC96Q2M329 555 aa24.11■■□□□ 1.45
SNX13-206ENST00000474067 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.11■■□□□ 1.45
SNX13-206ENST00000474067 ARRDC4Q8NCT1 418 aa24.11■■□□□ 1.45
SNX13-206ENST00000474067 FLRT1Q9NZU1 646 aa24.11■■□□□ 1.45
SNX13-206ENST00000474067 CNPY2Q9Y2B0 182 aa24.11■■□□□ 1.45
SNX13-206ENST00000474067 SEPT4O43236 478 aa24.1■■□□□ 1.45
SNX13-206ENST00000474067 COBLO75128 1261 aa24.1■■□□□ 1.45
SNX13-206ENST00000474067 CYBAP13498 195 aa24.1■■□□□ 1.45
SNX13-206ENST00000474067 DGKHQ86XP1 1220 aa24.1■■□□□ 1.45
SNX13-206ENST00000474067 ANKRD35Q8N283 1001 aa24.1■■□□□ 1.45
SNX13-206ENST00000474067 LHX8Q68G74 356 aa24.09■■□□□ 1.45
SNX13-206ENST00000474067 ZNF467Q7Z7K2 595 aaPredicted RBP24.09■■□□□ 1.45
SNX13-206ENST00000474067 ACAD9Q9H845 621 aa24.09■■□□□ 1.45
SNX13-206ENST00000474067 RAVER2Q9HCJ3 691 aaKnown RBP24.09■■□□□ 1.45
SNX13-206ENST00000474067 LAMA4Q16363 1823 aa24.08■■□□□ 1.45
SNX13-206ENST00000474067 PDE4AP27815 886 aa24.08■■□□□ 1.45
SNX13-206ENST00000474067 SLC4A3P48751 1232 aa24.08■■□□□ 1.45
SNX13-206ENST00000474067 TRDNQ13061 729 aa24.08■■□□□ 1.45
SNX13-206ENST00000474067 ZNF792Q3KQV3 632 aa24.08■■□□□ 1.45
SNX13-206ENST00000474067 TINF2Q9BSI4 451 aa24.08■■□□□ 1.45
SNX13-206ENST00000474067 SYNGAP1Q96PV0 1343 aa24.08■■□□□ 1.44
SNX13-206ENST00000474067 NMT2O60551 498 aa24.07■■□□□ 1.44
SNX13-206ENST00000474067 IGHA2P01877 340 aa24.07■■□□□ 1.44
SNX13-206ENST00000474067 GSPT1P15170 499 aaKnown RBP24.07■■□□□ 1.44
SNX13-206ENST00000474067 GPATCH4Q5T3I0 446 aaKnown RBP24.07■■□□□ 1.44
SNX13-206ENST00000474067 TMEM47Q9BQJ4 181 aa24.07■■□□□ 1.44
SNX13-206ENST00000474067 INCENPQ9NQS7 918 aa24.07■■□□□ 1.44
SNX13-206ENST00000474067 PFASO15067 1338 aa24.07■■□□□ 1.44
SNX13-206ENST00000474067 KBTBD13C9JR72 458 aa24.06■■□□□ 1.44
SNX13-206ENST00000474067 DNM1LO00429 736 aa24.06■■□□□ 1.44
SNX13-206ENST00000474067 KCTD1Q719H9 257 aa24.06■■□□□ 1.44
SNX13-206ENST00000474067 CENPQQ7L2Z9 268 aaPredicted RBP24.06■■□□□ 1.44
SNX13-206ENST00000474067 PRR12Q9ULL5 1215 aa24.06■■□□□ 1.44
SNX13-206ENST00000474067 U3KPZ7 1027 aaPredicted RBP24.06■■□□□ 1.44
SNX13-206ENST00000474067 H0YGN5 161 aa24.05■■□□□ 1.44
SNX13-206ENST00000474067 PGK2P07205 417 aa24.05■■□□□ 1.44
SNX13-206ENST00000474067 RARBP10826 455 aa24.05■■□□□ 1.44
SNX13-206ENST00000474067 TBC1D10CQ8IV04 446 aa24.05■■□□□ 1.44
SNX13-206ENST00000474067 UBAC1Q9BSL1 405 aa24.05■■□□□ 1.44
SNX13-206ENST00000474067 KAT14Q9H8E8 782 aa24.05■■□□□ 1.44
SNX13-206ENST00000474067 MTMR7Q9Y216 660 aa24.05■■□□□ 1.44
SNX13-206ENST00000474067 ZNFX1Q9P2E3 1918 aaKnown RBP24.05■■□□□ 1.44
SNX13-206ENST00000474067 BRCA2P51587 3418 aa24.04■■□□□ 1.44
SNX13-206ENST00000474067 AKR1A1P14550 325 aa24.04■■□□□ 1.44
SNX13-206ENST00000474067 BTNL9Q6UXG8 535 aa24.04■■□□□ 1.44
SNX13-206ENST00000474067 DIS3LQ8TF46 1054 aaKnown RBP24.04■■□□□ 1.44
SNX13-206ENST00000474067 PLXNA1Q9UIW2 1896 aa24.04■■□□□ 1.44
SNX13-206ENST00000474067 KDM4AO75164 1064 aa24.03■■□□□ 1.44
SNX13-206ENST00000474067 CHMLP26374 656 aa24.03■■□□□ 1.44
SNX13-206ENST00000474067 MAMDC4Q6UXC1 1216 aa24.03■■□□□ 1.44
SNX13-206ENST00000474067 KIAA1211Q6ZU35 1233 aa24.03■■□□□ 1.44
SNX13-206ENST00000474067 RNF146Q9NTX7 359 aa24.03■■□□□ 1.44
SNX13-206ENST00000474067 CCPG1Q9ULG6 757 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms