RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 CASP8AP2Q9UKL3 1982 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 A0A0G2JLL6 359 aaPredicted RBP10.74□□□□□ -0.69
SMC4-214ENST00000472991 TSPY2A6NKD2 308 aa10.74□□□□□ -0.69
SMC4-214ENST00000472991 IGF2BP3O00425 579 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMC4-214ENST00000472991 CXCL11O14625 94 aa10.74□□□□□ -0.69
SMC4-214ENST00000472991 REC8O95072 547 aa10.74□□□□□ -0.69
SMC4-214ENST00000472991 PCP11498 1178 aaKnown RBP10.74□□□□□ -0.69
SMC4-214ENST00000472991 CETPP11597 493 aa10.74□□□□□ -0.69
SMC4-214ENST00000472991 HMGCS2P54868 508 aa10.74□□□□□ -0.69
SMC4-214ENST00000472991 TFAP4Q01664 338 aa10.74□□□□□ -0.69
SMC4-214ENST00000472991 ATP2B2Q01814 1243 aa10.74□□□□□ -0.69
SMC4-214ENST00000472991 MTMR2Q13614 643 aa10.74□□□□□ -0.69
SMC4-214ENST00000472991 CREB3L3Q68CJ9 461 aa10.74□□□□□ -0.69
SMC4-214ENST00000472991 TRAF7Q6Q0C0 670 aa10.74□□□□□ -0.69
SMC4-214ENST00000472991 LIAT1Q6ZQX7 453 aa10.74□□□□□ -0.69
SMC4-214ENST00000472991 GADL1Q6ZQY3 521 aa10.74□□□□□ -0.69
SMC4-214ENST00000472991 PRRT2Q7Z6L0 340 aaPredicted RBP10.74□□□□□ -0.69
SMC4-214ENST00000472991 JMYQ8N9B5 988 aa10.74□□□□□ -0.69
SMC4-214ENST00000472991 ACER1Q8TDN7 264 aa10.74□□□□□ -0.69
SMC4-214ENST00000472991 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMC4-214ENST00000472991 ZSWIM8A7E2V4 1837 aa10.74□□□□□ -0.69
SMC4-214ENST00000472991 A0A0G2JMZ2 1700 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 IGKV6D-41A0A0C4DH26 115 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 B4E1Z4 1266 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 USP17L10C9JJH3 530 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 SLC27A2O14975 620 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 EEF2P13639 858 aaKnown RBP10.73□□□□□ -0.69
SMC4-214ENST00000472991 TM4SF4P48230 202 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 BACE1P56817 501 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 MOGSQ13724 837 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 NECTIN1Q15223 517 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 ZYXQ15942 572 aaKnown RBP10.73□□□□□ -0.69
SMC4-214ENST00000472991 STOX1Q6ZVD7 989 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 NEDD1Q8NHV4 660 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 CEP95Q96GE4 821 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 PTPN18Q99952 460 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 KANSL2Q9H9L4 492 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 ARHGEF10LQ9HCE6 1279 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 SLC27A5Q9Y2P5 690 aa10.73□□□□□ -0.69
SMC4-214ENST00000472991 A0A1W2PRG0 241 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 BTBD19C9JJ37 291 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 E7EWF7 191 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 NMT2O60551 498 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 KDM4AO75164 1064 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 INHBEP58166 350 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 MAP2K1Q02750 393 aaPredicted RBP10.72□□□□□ -0.69
SMC4-214ENST00000472991 SH3D19Q5HYK7 790 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 PLA2G2CQ5R387 149 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 USP17L2Q6R6M4 530 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 SIAH1Q8IUQ4 282 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 FAM43AQ8N2R8 423 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 ESR2Q92731 530 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 KRT23Q9C075 422 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 KIAA1683Q9H0B3 1180 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 CNNM2Q9H8M5 875 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 DOCK3Q8IZD9 2030 aa10.72□□□□□ -0.69
SMC4-214ENST00000472991 C19orf81C9J6K1 198 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 USP14P54578 494 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 TRDNQ13061 729 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 C8orf34Q49A92 452 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 TREML2Q5T2D2 321 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 RNF20Q5VTR2 975 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 GPAT2Q6NUI2 795 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 FASTKD5Q7L8L6 764 aaKnown RBP10.71□□□□□ -0.69
SMC4-214ENST00000472991 RALYLQ86SE5 291 aaKnown RBP10.71□□□□□ -0.69
SMC4-214ENST00000472991 ANKRD23Q86SG2 305 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 ZNF598Q86UK7 904 aaKnown RBP10.71□□□□□ -0.69
SMC4-214ENST00000472991 LRRC47Q8N1G4 583 aaKnown RBP10.71□□□□□ -0.69
SMC4-214ENST00000472991 PROCA1Q8NCQ7 364 aaPredicted RBP10.71□□□□□ -0.69
SMC4-214ENST00000472991 ZKSCAN3Q9BRR0 538 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 SH2D4AQ9H788 454 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 IL17RBQ9NRM6 502 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 MTMR4Q9NYA4 1195 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 TMOD4Q9NZQ9 345 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 NYAP2Q9P242 653 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 STX8Q9UNK0 236 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 TMX2Q9Y320 296 aa10.71□□□□□ -0.69
SMC4-214ENST00000472991 RAD21O60216 631 aa10.7□□□□□ -0.7
SMC4-214ENST00000472991 TTLL1O95922 423 aa10.7□□□□□ -0.7
SMC4-214ENST00000472991 HSPA1AP0DMV8 641 aaKnown RBP10.7□□□□□ -0.7
SMC4-214ENST00000472991 HSPA1BP0DMV9 641 aaKnown RBP10.7□□□□□ -0.7
SMC4-214ENST00000472991 CD46P15529 392 aa10.7□□□□□ -0.7
SMC4-214ENST00000472991 VCAM1P19320 739 aa10.7□□□□□ -0.7
SMC4-214ENST00000472991 HSPA4P34932 840 aa10.7□□□□□ -0.7
SMC4-214ENST00000472991 TAF1CQ15572 869 aaPredicted RBP10.7□□□□□ -0.7
SMC4-214ENST00000472991 OTUD7BQ6GQQ9 843 aa10.7□□□□□ -0.7
SMC4-214ENST00000472991 CYB5R4Q7L1T6 521 aa10.7□□□□□ -0.7
SMC4-214ENST00000472991 NCOA7Q8NI08 942 aa10.7□□□□□ -0.7
SMC4-214ENST00000472991 C12orf42Q96LP6 360 aa10.7□□□□□ -0.7
SMC4-214ENST00000472991 BEGAINQ9BUH8 593 aa10.7□□□□□ -0.7
SMC4-214ENST00000472991 VCPKMTQ9H867 229 aa10.7□□□□□ -0.7
SMC4-214ENST00000472991 TCP11L1Q9NUJ3 509 aa10.7□□□□□ -0.7
SMC4-214ENST00000472991 RNF186Q9NXI6 227 aa10.7□□□□□ -0.7
SMC4-214ENST00000472991 CLIP2Q9UDT6 1046 aa10.7□□□□□ -0.7
SMC4-214ENST00000472991 AGTPBP1Q9UPW5 1226 aa10.7□□□□□ -0.7
SMC4-214ENST00000472991 SMCHD1A6NHR9 2005 aa10.69□□□□□ -0.7
SMC4-214ENST00000472991 TNKSO95271 1327 aa10.69□□□□□ -0.7
SMC4-214ENST00000472991 ZNFX1Q9P2E3 1918 aaKnown RBP10.69□□□□□ -0.7
SMC4-214ENST00000472991 PDHXO00330 501 aa10.69□□□□□ -0.7
SMC4-214ENST00000472991 EPB41L2O43491 1005 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms