RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 IMPACTQ9P2X3 320 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 CLIP2Q9UDT6 1046 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 HPSEQ9Y251 543 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.75□□□□□ -1.01
CCDC171-205ENST00000472806 LAMB1P07942 1786 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 AFF2P51816 1311 aa8.75□□□□□ -1.01
CCDC171-205ENST00000472806 DLEC1Q9Y238 1755 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 TRIM75PA6NK02 468 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 TSPY2A6NKD2 308 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 IKBKBO14920 756 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 CBFA2T2O43439 604 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 WFS1O76024 890 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 CALML3P27482 149 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 MARCKSP29966 332 aaPredicted RBP8.74□□□□□ -1.01
CCDC171-205ENST00000472806 NFIXQ14938 502 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 CT47A1Q5JQC4 288 aaPredicted RBP8.74□□□□□ -1.01
CCDC171-205ENST00000472806 C11orf57Q6ZUT1 292 aaPredicted RBP8.74□□□□□ -1.01
CCDC171-205ENST00000472806 DGKHQ86XP1 1220 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 SEPT12Q8IYM1 358 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 SPC24Q8NBT2 197 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 CNNM3Q8NE01 707 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 TBC1D22AQ8WUA7 517 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 FERMT2Q96AC1 680 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 AIFM3Q96NN9 605 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 TTC12Q9H892 705 aaPredicted RBP8.74□□□□□ -1.01
CCDC171-205ENST00000472806 KAT14Q9H8E8 782 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 INCENPQ9NQS7 918 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 AATFQ9NY61 560 aaKnown RBP eCLIP8.74□□□□□ -1.01
CCDC171-205ENST00000472806 KCNH3Q9ULD8 1083 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 TACC3Q9Y6A5 838 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 ECM29Q5VYK3 1845 aa8.74□□□□□ -1.01
CCDC171-205ENST00000472806 ROBO3Q96MS0 1386 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 SBF2Q86WG5 1849 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 BTBD18B2RXH4 712 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 AP5Z1O43299 807 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 WDHD1O75717 1129 aaPredicted RBP8.73□□□□□ -1.01
CCDC171-205ENST00000472806 TRAPPC10P48553 1259 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 KCNQ4P56696 695 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 PRR5LQ6MZQ0 368 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 KRBA2Q6ZNG9 492 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 TMTC3Q6ZXV5 915 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 DHX40Q8IX18 779 aaKnown RBP8.73□□□□□ -1.01
CCDC171-205ENST00000472806 STK11IPQ8N1F8 1099 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 AOPEPQ8N6M6 819 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 TRIML1Q8N9V2 468 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 KIAA1524Q8TCG1 905 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 ANKS1AQ92625 1134 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 LZTS2Q9BRK4 669 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 PHF20Q9BVI0 1012 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 GJB4Q9NTQ9 266 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 TCP11L1Q9NUJ3 509 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 MCM9Q9NXL9 1143 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 TUBE1Q9UJT0 475 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 GGA1Q9UJY5 639 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 PCDHGC3Q9UN70 934 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 R3HCC1Q9Y3T6 440 aaKnown RBP8.73□□□□□ -1.01
CCDC171-205ENST00000472806 SRPRBQ9Y5M8 271 aaKnown RBP8.73□□□□□ -1.01
CCDC171-205ENST00000472806 IRS2Q9Y4H2 1338 aa8.73□□□□□ -1.01
CCDC171-205ENST00000472806 COL4A1P02462 1669 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 SMC2O95347 1197 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 SERPINB2P05120 415 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 PRDX5P30044 214 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 TROAPQ12815 778 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 CRY2Q49AN0 593 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 GALNT17Q6IS24 598 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 SHC4Q6S5L8 630 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 CCDC186Q7Z3E2 898 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 ZNF444Q8N0Y2 327 aaPredicted RBP8.72□□□□□ -1.01
CCDC171-205ENST00000472806 CCDC150Q8NCX0 1101 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 CCDC148Q8NFR7 591 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 CRAMP1Q96RY5 1269 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 TMX4Q9H1E5 349 aaPredicted RBP8.72□□□□□ -1.01
CCDC171-205ENST00000472806 MKNK2Q9HBH9 465 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 SH3GLB2Q9NR46 395 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 PODXL2Q9NZ53 605 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 SUGT1Q9Y2Z0 365 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 MROH7-TTC4A0A0A0MT08 1334 aa8.72□□□□□ -1.01
CCDC171-205ENST00000472806 TNRC6CQ9HCJ0 1690 aaKnown RBP8.72□□□□□ -1.01
CCDC171-205ENST00000472806 DYNC1I1O14576 645 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 UFL1O94874 794 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 SCG2P13521 617 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 IL1R1P14778 569 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 PTGS1P23219 599 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 KLRK1P26718 216 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 HOXA10P31260 410 aaPredicted RBP8.71□□□□□ -1.02
CCDC171-205ENST00000472806 GUCY1A2P33402 732 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 NLRP5P59047 1200 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 MYL5Q02045 173 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 PFKFB3Q16875 520 aaPredicted RBP8.71□□□□□ -1.02
CCDC171-205ENST00000472806 C12orf60Q5U649 245 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 PTF1AQ7RTS3 328 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 MTERF4Q7Z6M4 381 aaKnown RBP8.71□□□□□ -1.02
CCDC171-205ENST00000472806 MLKLQ8NB16 471 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 ZNF384Q8TF68 577 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 ZNF830Q96NB3 372 aaPredicted RBP8.71□□□□□ -1.02
CCDC171-205ENST00000472806 MAP7D2Q96T17 732 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 CABP5Q9NP86 173 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 FBXO2Q9UK22 296 aaPredicted RBP8.71□□□□□ -1.02
CCDC171-205ENST00000472806 KCNJ14Q9UNX9 436 aa8.71□□□□□ -1.02
CCDC171-205ENST00000472806 CNTNAP5Q8WYK1 1306 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms