RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 MTMR7Q9Y216 660 aa20.2■□□□□ 0.82
PKD1-208ENST00000472577 NR2E3Q9Y5X4 410 aa20.2■□□□□ 0.82
PKD1-208ENST00000472577 SPDYE16A6NNV3 312 aaPredicted RBP20.19■□□□□ 0.82
PKD1-208ENST00000472577 PEX10O60683 326 aa20.19■□□□□ 0.82
PKD1-208ENST00000472577 MCCP23508 829 aa20.19■□□□□ 0.82
PKD1-208ENST00000472577 PAWRQ96IZ0 340 aaKnown RBP20.19■□□□□ 0.82
PKD1-208ENST00000472577 NEK1Q96PY6 1258 aa20.19■□□□□ 0.82
PKD1-208ENST00000472577 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.19■□□□□ 0.82
PKD1-208ENST00000472577 SENP2Q9HC62 589 aa20.19■□□□□ 0.82
PKD1-208ENST00000472577 FBXO28Q9NVF7 368 aa20.19■□□□□ 0.82
PKD1-208ENST00000472577 IFIT3O14879 490 aaKnown RBP20.18■□□□□ 0.82
PKD1-208ENST00000472577 PRC1O43663 620 aa20.18■□□□□ 0.82
PKD1-208ENST00000472577 FLOT1O75955 427 aa20.18■□□□□ 0.82
PKD1-208ENST00000472577 BMP3P12645 472 aa20.18■□□□□ 0.82
PKD1-208ENST00000472577 GCLCP48506 637 aaPredicted RBP20.18■□□□□ 0.82
PKD1-208ENST00000472577 KRT32Q14532 448 aa20.18■□□□□ 0.82
PKD1-208ENST00000472577 COG2Q14746 738 aa20.18■□□□□ 0.82
PKD1-208ENST00000472577 GMCL1Q96IK5 515 aa20.18■□□□□ 0.82
PKD1-208ENST00000472577 TXNRD2Q9NNW7 524 aa20.18■□□□□ 0.82
PKD1-208ENST00000472577 RBPJLQ9UBG7 517 aa20.18■□□□□ 0.82
PKD1-208ENST00000472577 LAMA3Q16787 3333 aa20.18■□□□□ 0.82
PKD1-208ENST00000472577 A0A0G2JMZ2 1700 aa20.17■□□□□ 0.82
PKD1-208ENST00000472577 SOX1O00570 391 aaPredicted RBP20.17■□□□□ 0.82
PKD1-208ENST00000472577 EVI5O60447 810 aa20.17■□□□□ 0.82
PKD1-208ENST00000472577 DSG3P32926 999 aa20.17■□□□□ 0.82
PKD1-208ENST00000472577 MCM5P33992 734 aa20.17■□□□□ 0.82
PKD1-208ENST00000472577 SLC1A4P43007 532 aa20.17■□□□□ 0.82
PKD1-208ENST00000472577 IFIT1BQ5T764 474 aaKnown RBP20.17■□□□□ 0.82
PKD1-208ENST00000472577 LBX2Q6XYB7 198 aa20.17■□□□□ 0.82
PKD1-208ENST00000472577 PNMA1Q8ND90 353 aa20.17■□□□□ 0.82
PKD1-208ENST00000472577 IGDCC4Q8TDY8 1250 aa20.17■□□□□ 0.82
PKD1-208ENST00000472577 KAT14Q9H8E8 782 aa20.17■□□□□ 0.82
PKD1-208ENST00000472577 GPHNQ9NQX3 736 aaPredicted RBP20.17■□□□□ 0.82
PKD1-208ENST00000472577 GJD2Q9UKL4 321 aa20.17■□□□□ 0.82
PKD1-208ENST00000472577 CNMDO75829 334 aa20.16■□□□□ 0.82
PKD1-208ENST00000472577 HMGCRP04035 888 aa20.16■□□□□ 0.82
PKD1-208ENST00000472577 PDHBP11177 359 aa20.16■□□□□ 0.82
PKD1-208ENST00000472577 TMEM67Q5HYA8 995 aa20.16■□□□□ 0.82
PKD1-208ENST00000472577 SAMD1Q6SPF0 538 aaPredicted RBP20.16■□□□□ 0.82
PKD1-208ENST00000472577 KCTD1Q719H9 257 aa20.16■□□□□ 0.82
PKD1-208ENST00000472577 DCAF4Q8WV16 495 aa20.16■□□□□ 0.82
PKD1-208ENST00000472577 ATG4CQ96DT6 458 aa20.16■□□□□ 0.82
PKD1-208ENST00000472577 HOXC10Q9NYD6 342 aa20.16■□□□□ 0.82
PKD1-208ENST00000472577 MORF4L1Q9UBU8 362 aa20.16■□□□□ 0.82
PKD1-208ENST00000472577 ERICH2A1L162 156 aa20.15■□□□□ 0.82
PKD1-208ENST00000472577 SNHG28P0DPA3 235 aa20.15■□□□□ 0.82
PKD1-208ENST00000472577 MNX1P50219 401 aaPredicted RBP20.15■□□□□ 0.82
PKD1-208ENST00000472577 EXOSC10Q01780 885 aaKnown RBP20.15■□□□□ 0.82
PKD1-208ENST00000472577 WTAPQ15007 396 aa20.15■□□□□ 0.82
PKD1-208ENST00000472577 SART3Q15020 963 aaKnown RBP20.15■□□□□ 0.82
PKD1-208ENST00000472577 GTF3C2Q8WUA4 911 aaPredicted RBP20.15■□□□□ 0.82
PKD1-208ENST00000472577 TRIB2Q92519 343 aa20.15■□□□□ 0.82
PKD1-208ENST00000472577 JAKMIP1Q96N16 626 aaKnown RBP20.15■□□□□ 0.82
PKD1-208ENST00000472577 MTA3Q9BTC8 594 aa20.15■□□□□ 0.82
PKD1-208ENST00000472577 PAGR1Q9BTK6 254 aa20.15■□□□□ 0.82
PKD1-208ENST00000472577 LRRC2Q9BYS8 371 aa20.15■□□□□ 0.82
PKD1-208ENST00000472577 LY9Q9HBG7 655 aa20.15■□□□□ 0.82
PKD1-208ENST00000472577 BTBD7Q9P203 1132 aa20.15■□□□□ 0.82
PKD1-208ENST00000472577 PPP1R9AQ9ULJ8 1098 aa20.15■□□□□ 0.82
PKD1-208ENST00000472577 ISY1Q9ULR0 285 aaKnown RBP20.15■□□□□ 0.82
PKD1-208ENST00000472577 FRMPD2Q68DX3 1309 aaPredicted RBP20.14■□□□□ 0.81
PKD1-208ENST00000472577 TMEM232C9JQI7 657 aa20.14■□□□□ 0.81
PKD1-208ENST00000472577 SH2B2O14492 632 aaPredicted RBP20.14■□□□□ 0.81
PKD1-208ENST00000472577 EIF5BO60841 1220 aaKnown RBP20.14■□□□□ 0.81
PKD1-208ENST00000472577 CPA1P15085 419 aa20.14■□□□□ 0.81
PKD1-208ENST00000472577 CCDC96Q2M329 555 aa20.14■□□□□ 0.81
PKD1-208ENST00000472577 Q3C1V9 767 aa20.14■□□□□ 0.81
PKD1-208ENST00000472577 DHX32Q7L7V1 743 aaKnown RBP20.14■□□□□ 0.81
PKD1-208ENST00000472577 LRCH3Q96II8 777 aa20.14■□□□□ 0.81
PKD1-208ENST00000472577 TMEM87BQ96K49 555 aa20.14■□□□□ 0.81
PKD1-208ENST00000472577 TCEANC2Q96MN5 208 aa20.14■□□□□ 0.81
PKD1-208ENST00000472577 SLF1Q9BQI6 1058 aa20.14■□□□□ 0.81
PKD1-208ENST00000472577 FEM1BQ9UK73 627 aa20.14■□□□□ 0.81
PKD1-208ENST00000472577 ADAMTS5Q9UNA0 930 aa20.14■□□□□ 0.81
PKD1-208ENST00000472577 RABGAP1Q9Y3P9 1069 aa20.14■□□□□ 0.81
PKD1-208ENST00000472577 WDR19Q8NEZ3 1342 aa20.13■□□□□ 0.81
PKD1-208ENST00000472577 ERVK-9P63128 1117 aa20.13■□□□□ 0.81
PKD1-208ENST00000472577 ERVK-24P63145 666 aa20.13■□□□□ 0.81
PKD1-208ENST00000472577 ZNF543Q08ER8 600 aa20.13■□□□□ 0.81
PKD1-208ENST00000472577 TTBK2Q6IQ55 1244 aa20.13■□□□□ 0.81
PKD1-208ENST00000472577 GPCPD1Q9NPB8 672 aa20.13■□□□□ 0.81
PKD1-208ENST00000472577 COL11A1P12107 1806 aaPredicted RBP20.13■□□□□ 0.81
PKD1-208ENST00000472577 HMGB1P09429 215 aaKnown RBP20.12■□□□□ 0.81
PKD1-208ENST00000472577 STAT2P52630 851 aa20.12■□□□□ 0.81
PKD1-208ENST00000472577 NECAB2Q7Z6G3 386 aa20.12■□□□□ 0.81
PKD1-208ENST00000472577 C7orf61Q8IZ16 206 aa20.12■□□□□ 0.81
PKD1-208ENST00000472577 PRPF38AQ8NAV1 312 aaKnown RBP20.12■□□□□ 0.81
PKD1-208ENST00000472577 GPRC5AQ8NFJ5 357 aa20.12■□□□□ 0.81
PKD1-208ENST00000472577 KIFC2Q96AC6 838 aa20.12■□□□□ 0.81
PKD1-208ENST00000472577 RPTORQ8N122 1335 aa20.11■□□□□ 0.81
PKD1-208ENST00000472577 VWA5AO00534 786 aa20.11■□□□□ 0.81
PKD1-208ENST00000472577 PLA2G6O60733 806 aa20.11■□□□□ 0.81
PKD1-208ENST00000472577 GOLGA8HP0CJ92 632 aa20.11■□□□□ 0.81
PKD1-208ENST00000472577 BLOC1S2Q6QNY1 142 aa20.11■□□□□ 0.81
PKD1-208ENST00000472577 FAM160B2Q86V87 743 aa20.11■□□□□ 0.81
PKD1-208ENST00000472577 MB21D1Q8N884 522 aa20.11■□□□□ 0.81
PKD1-208ENST00000472577 REPS2Q8NFH8 660 aa20.11■□□□□ 0.81
PKD1-208ENST00000472577 CHURC1Q8WUH1 139 aa20.11■□□□□ 0.81
PKD1-208ENST00000472577 ZMYND8Q9ULU4 1186 aaPredicted RBP20.11■□□□□ 0.81
PKD1-208ENST00000472577 A0A1W2PPC1 479 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms