RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ASGR1P07306 291 aa22.99■■□□□ 1.27
SORT1-203ENST00000471996 BMP1P13497 986 aa22.99■■□□□ 1.27
SORT1-203ENST00000471996 MAMDC4Q6UXC1 1216 aa22.99■■□□□ 1.27
SORT1-203ENST00000471996 FRAT1Q92837 279 aaPredicted RBP22.99■■□□□ 1.27
SORT1-203ENST00000471996 VTI1AQ96AJ9 217 aa22.99■■□□□ 1.27
SORT1-203ENST00000471996 NECAB3Q96P71 396 aaPredicted RBP22.99■■□□□ 1.27
SORT1-203ENST00000471996 SLC28A3Q9HAS3 691 aa22.99■■□□□ 1.27
SORT1-203ENST00000471996 IL23AQ9NPF7 189 aa22.99■■□□□ 1.27
SORT1-203ENST00000471996 ZHX1Q9UKY1 873 aaPredicted RBP22.99■■□□□ 1.27
SORT1-203ENST00000471996 PPP1R9AQ9ULJ8 1098 aa22.99■■□□□ 1.27
SORT1-203ENST00000471996 ZNFX1Q9P2E3 1918 aaKnown RBP22.98■■□□□ 1.27
SORT1-203ENST00000471996 A0A0U1RQG5 324 aaPredicted RBP22.98■■□□□ 1.27
SORT1-203ENST00000471996 C6orf222P0C671 652 aaPredicted RBP22.98■■□□□ 1.27
SORT1-203ENST00000471996 PDE6AP16499 860 aa22.98■■□□□ 1.27
SORT1-203ENST00000471996 IRX5P78411 483 aaPredicted RBP22.98■■□□□ 1.27
SORT1-203ENST00000471996 SLC9C2Q5TAH2 1124 aa22.98■■□□□ 1.27
SORT1-203ENST00000471996 FAM126BQ8IXS8 530 aa22.98■■□□□ 1.27
SORT1-203ENST00000471996 CCDC17Q96LX7 622 aa22.98■■□□□ 1.27
SORT1-203ENST00000471996 PLXNA1Q9UIW2 1896 aa22.98■■□□□ 1.27
SORT1-203ENST00000471996 XIRP2A4UGR9 3374 aa22.97■■□□□ 1.27
SORT1-203ENST00000471996 NAV1Q8NEY1 1877 aa22.97■■□□□ 1.27
SORT1-203ENST00000471996 APBB1O00213 710 aa22.97■■□□□ 1.27
SORT1-203ENST00000471996 TLR3O15455 904 aaKnown RBP22.97■■□□□ 1.27
SORT1-203ENST00000471996 TTF1Q15361 905 aaPredicted RBP22.97■■□□□ 1.27
SORT1-203ENST00000471996 TMEM57Q8N5G2 664 aa22.97■■□□□ 1.27
SORT1-203ENST00000471996 MTIF3Q9H2K0 278 aaKnown RBP22.97■■□□□ 1.27
SORT1-203ENST00000471996 SPC25Q9HBM1 224 aa22.97■■□□□ 1.27
SORT1-203ENST00000471996 YBX2Q9Y2T7 364 aaKnown RBP22.97■■□□□ 1.27
SORT1-203ENST00000471996 NCOR1O75376 2440 aa22.97■■□□□ 1.27
SORT1-203ENST00000471996 EEF2P13639 858 aaKnown RBP22.96■■□□□ 1.27
SORT1-203ENST00000471996 CYP2C18P33260 490 aa22.96■■□□□ 1.27
SORT1-203ENST00000471996 GJA9P57773 515 aa22.96■■□□□ 1.27
SORT1-203ENST00000471996 LCORLQ8N3X6 602 aa22.96■■□□□ 1.27
SORT1-203ENST00000471996 DDX11Q96FC9 970 aa22.96■■□□□ 1.27
SORT1-203ENST00000471996 UPF3AQ9H1J1 476 aaKnown RBP22.96■■□□□ 1.27
SORT1-203ENST00000471996 C1orf115Q9H7X2 142 aa22.96■■□□□ 1.27
SORT1-203ENST00000471996 ARIH1Q9Y4X5 557 aaPredicted RBP22.96■■□□□ 1.27
SORT1-203ENST00000471996 BDP1A6H8Y1 2624 aa22.96■■□□□ 1.27
SORT1-203ENST00000471996 DNAJC25-GNG10A0A024R161 153 aa22.95■■□□□ 1.26
SORT1-203ENST00000471996 FGBP02675 491 aa22.95■■□□□ 1.26
SORT1-203ENST00000471996 ACVR2BQ13705 512 aa22.95■■□□□ 1.26
SORT1-203ENST00000471996 ZNF467Q7Z7K2 595 aaPredicted RBP22.95■■□□□ 1.26
SORT1-203ENST00000471996 ZNF532Q9HCE3 1301 aa22.95■■□□□ 1.26
SORT1-203ENST00000471996 PARP14Q460N5 1801 aa22.94■■□□□ 1.26
SORT1-203ENST00000471996 TCRBV5S4A2TA0A5A2 114 aa22.94■■□□□ 1.26
SORT1-203ENST00000471996 ADCY6O43306 1168 aa22.94■■□□□ 1.26
SORT1-203ENST00000471996 CD4P01730 458 aa22.94■■□□□ 1.26
SORT1-203ENST00000471996 CDK8P49336 464 aa22.94■■□□□ 1.26
SORT1-203ENST00000471996 GNASQ5JWF2 1037 aa22.94■■□□□ 1.26
SORT1-203ENST00000471996 FAM83BQ5T0W9 1011 aa22.94■■□□□ 1.26
SORT1-203ENST00000471996 AACSQ86V21 672 aa22.94■■□□□ 1.26
SORT1-203ENST00000471996 TEX13BQ9BXU2 312 aa22.94■■□□□ 1.26
SORT1-203ENST00000471996 KANSL2Q9H9L4 492 aa22.94■■□□□ 1.26
SORT1-203ENST00000471996 GOPCQ9HD26 462 aa22.94■■□□□ 1.26
SORT1-203ENST00000471996 ZNF316A6NFI3 1004 aaPredicted RBP22.93■■□□□ 1.26
SORT1-203ENST00000471996 TFF2Q03403 129 aa22.93■■□□□ 1.26
SORT1-203ENST00000471996 AAK1Q2M2I8 961 aa22.93■■□□□ 1.26
SORT1-203ENST00000471996 CCDC144BQ3MJ40 725 aa22.93■■□□□ 1.26
SORT1-203ENST00000471996 ABHD16BQ9H3Z7 469 aa22.93■■□□□ 1.26
SORT1-203ENST00000471996 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.93■■□□□ 1.26
SORT1-203ENST00000471996 RIPK3Q9Y572 518 aa22.93■■□□□ 1.26
SORT1-203ENST00000471996 COL11A1P12107 1806 aaPredicted RBP22.92■■□□□ 1.26
SORT1-203ENST00000471996 SMIM22K7EJ46 135 aa22.92■■□□□ 1.26
SORT1-203ENST00000471996 SNRNP48Q6IEG0 339 aaKnown RBP22.92■■□□□ 1.26
SORT1-203ENST00000471996 OTOP2Q7RTS6 562 aa22.92■■□□□ 1.26
SORT1-203ENST00000471996 ARMT1Q9H993 441 aa22.92■■□□□ 1.26
SORT1-203ENST00000471996 ATP8A2Q9NTI2 1148 aa22.92■■□□□ 1.26
SORT1-203ENST00000471996 CHD7Q9P2D1 2997 aa22.92■■□□□ 1.26
SORT1-203ENST00000471996 MYO9BQ13459 2157 aa22.91■■□□□ 1.26
SORT1-203ENST00000471996 CTAGE5O15320 804 aa22.91■■□□□ 1.26
SORT1-203ENST00000471996 RAD21O60216 631 aa22.91■■□□□ 1.26
SORT1-203ENST00000471996 C12orf60Q5U649 245 aa22.91■■□□□ 1.26
SORT1-203ENST00000471996 PPP2R2DQ66LE6 453 aa22.91■■□□□ 1.26
SORT1-203ENST00000471996 C16orf86Q6ZW13 317 aa22.91■■□□□ 1.26
SORT1-203ENST00000471996 MICALL1Q8N3F8 863 aa22.91■■□□□ 1.26
SORT1-203ENST00000471996 SLF1Q9BQI6 1058 aa22.91■■□□□ 1.26
SORT1-203ENST00000471996 HIPK3Q9H422 1215 aa22.91■■□□□ 1.26
SORT1-203ENST00000471996 CYP2D7A0A087X1C5 515 aa22.9■■□□□ 1.26
SORT1-203ENST00000471996 ERC2O15083 957 aa22.9■■□□□ 1.26
SORT1-203ENST00000471996 PRKAB2O43741 272 aa22.9■■□□□ 1.26
SORT1-203ENST00000471996 KCNQ1P51787 676 aa22.9■■□□□ 1.26
SORT1-203ENST00000471996 RABGGTBP53611 331 aa22.9■■□□□ 1.26
SORT1-203ENST00000471996 NKX3-2P78367 333 aa22.9■■□□□ 1.26
SORT1-203ENST00000471996 SLC43A3Q8NBI5 491 aa22.9■■□□□ 1.26
SORT1-203ENST00000471996 LRFN3Q9BTN0 628 aa22.9■■□□□ 1.26
SORT1-203ENST00000471996 UMODL1Q5DID0 1318 aa22.89■■□□□ 1.26
SORT1-203ENST00000471996 ERC1Q8IUD2 1116 aa22.89■■□□□ 1.25
SORT1-203ENST00000471996 FGD4Q96M96 766 aa22.89■■□□□ 1.25
SORT1-203ENST00000471996 HCN4Q9Y3Q4 1203 aa22.89■■□□□ 1.25
SORT1-203ENST00000471996 PCDHA11Q9Y5I1 949 aa22.89■■□□□ 1.25
SORT1-203ENST00000471996 USP17L12C9JPN9 530 aa22.88■■□□□ 1.25
SORT1-203ENST00000471996 USP17L21D6R901 530 aa22.88■■□□□ 1.25
SORT1-203ENST00000471996 GOLIM4O00461 696 aa22.88■■□□□ 1.25
SORT1-203ENST00000471996 ATP2A1O14983 1001 aa22.88■■□□□ 1.25
SORT1-203ENST00000471996 MYOGP15173 224 aa22.88■■□□□ 1.25
SORT1-203ENST00000471996 ZKSCAN2Q63HK3 967 aa22.88■■□□□ 1.25
SORT1-203ENST00000471996 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.88■■□□□ 1.255e-12■■■□□ 14.8
SORT1-203ENST00000471996 ARMCX2Q7L311 632 aa22.88■■□□□ 1.25
SORT1-203ENST00000471996 AMOTL1Q8IY63 956 aa22.88■■□□□ 1.25
SORT1-203ENST00000471996 EPHX3Q9H6B9 360 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms