RNA–Protein interactions for RNA: ENST00000471145.1

NPHP3-205, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 435 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-205ENST00000471145 PCDHB10Q9UN67 800 aa6.85□□□□□ -1.31
NPHP3-205ENST00000471145 KDM6BO15054 1643 aa6.85□□□□□ -1.31
NPHP3-205ENST00000471145 SHROOM2Q13796 1616 aa6.85□□□□□ -1.31
NPHP3-205ENST00000471145 CUX1P39880 1505 aa6.85□□□□□ -1.31
NPHP3-205ENST00000471145 ABCC10Q5T3U5 1492 aa6.85□□□□□ -1.31
NPHP3-205ENST00000471145 DIP2BQ9P265 1576 aa6.84□□□□□ -1.31
NPHP3-205ENST00000471145 SRFP11831 508 aa6.84□□□□□ -1.31
NPHP3-205ENST00000471145 GUCY2CP25092 1073 aa6.84□□□□□ -1.31
NPHP3-205ENST00000471145 GDNFP39905 211 aa6.84□□□□□ -1.31
NPHP3-205ENST00000471145 OGFOD2Q6N063 350 aa6.84□□□□□ -1.31
NPHP3-205ENST00000471145 NLRC3Q7RTR2 1065 aa6.84□□□□□ -1.31
NPHP3-205ENST00000471145 POU5F2Q8N7G0 328 aa6.84□□□□□ -1.31
NPHP3-205ENST00000471145 FAM168AQ92567 244 aa6.84□□□□□ -1.31
NPHP3-205ENST00000471145 DEPDC7Q96QD5 511 aa6.84□□□□□ -1.31
NPHP3-205ENST00000471145 GPR62Q9BZJ7 368 aa6.84□□□□□ -1.31
NPHP3-205ENST00000471145 GMIPQ9P107 970 aa6.84□□□□□ -1.31
NPHP3-205ENST00000471145 MRPL42Q9Y6G3 142 aaKnown RBP6.84□□□□□ -1.31
NPHP3-205ENST00000471145 NUP160Q12769 1436 aa6.84□□□□□ -1.32
NPHP3-205ENST00000471145 ABCA5Q8WWZ7 1642 aa6.83□□□□□ -1.32
NPHP3-205ENST00000471145 HECW2Q9P2P5 1572 aa6.83□□□□□ -1.32
NPHP3-205ENST00000471145 MEIS3P2A8K0S8 358 aa6.83□□□□□ -1.32
NPHP3-205ENST00000471145 DDAH1O94760 285 aa6.83□□□□□ -1.32
NPHP3-205ENST00000471145 NME1P15531 152 aaKnown RBP6.83□□□□□ -1.32
NPHP3-205ENST00000471145 RASA3Q14644 834 aa6.83□□□□□ -1.32
NPHP3-205ENST00000471145 NFE2L2Q16236 605 aa6.83□□□□□ -1.32
NPHP3-205ENST00000471145 DDR2Q16832 855 aa6.83□□□□□ -1.32
NPHP3-205ENST00000471145 LRRFIP1Q32MZ4 808 aaKnown RBP6.83□□□□□ -1.32
NPHP3-205ENST00000471145 C6orf15Q6UXA7 325 aaPredicted RBP6.83□□□□□ -1.32
NPHP3-205ENST00000471145 PHACTR4Q8IZ21 702 aa6.83□□□□□ -1.32
NPHP3-205ENST00000471145 DTWD2Q8NBA8 298 aa6.83□□□□□ -1.32
NPHP3-205ENST00000471145 BAHD1Q8TBE0 780 aaPredicted RBP6.83□□□□□ -1.32
NPHP3-205ENST00000471145 KREMEN1Q96MU8 473 aa6.83□□□□□ -1.32
NPHP3-205ENST00000471145 SLC9A7Q96T83 725 aa6.83□□□□□ -1.32
NPHP3-205ENST00000471145 TM9SF2Q99805 663 aa6.83□□□□□ -1.32
NPHP3-205ENST00000471145 ASPNQ9BXN1 380 aa6.83□□□□□ -1.32
NPHP3-205ENST00000471145 FAM86C1Q9NVL1 165 aa6.83□□□□□ -1.32
NPHP3-205ENST00000471145 TMA7Q9Y2S6 64 aaKnown RBP6.83□□□□□ -1.32
NPHP3-205ENST00000471145 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.83□□□□□ -1.32
NPHP3-205ENST00000471145 GRIN2AQ12879 1464 aa6.83□□□□□ -1.32
NPHP3-205ENST00000471145 LTBP3Q9NS15 1303 aa6.82□□□□□ -1.32
NPHP3-205ENST00000471145 TLDC2A0PJX2 215 aa6.82□□□□□ -1.32
NPHP3-205ENST00000471145 RBAK-RBAKDNI3L0D1 243 aa6.82□□□□□ -1.32
NPHP3-205ENST00000471145 RGS13O14921 159 aa6.82□□□□□ -1.32
NPHP3-205ENST00000471145 GJB6O95452 261 aa6.82□□□□□ -1.32
NPHP3-205ENST00000471145 ESR1P03372 595 aa6.82□□□□□ -1.32
NPHP3-205ENST00000471145 RAG1P15918 1043 aa6.82□□□□□ -1.32
NPHP3-205ENST00000471145 GBP1P32455 592 aa6.82□□□□□ -1.32
NPHP3-205ENST00000471145 GAB4Q2WGN9 574 aa6.82□□□□□ -1.32
NPHP3-205ENST00000471145 UNC5AQ6ZN44 842 aa6.82□□□□□ -1.32
NPHP3-205ENST00000471145 KRTAP19-1Q8IUB9 90 aa6.82□□□□□ -1.32
NPHP3-205ENST00000471145 NLGN1Q8N2Q7 840 aa6.82□□□□□ -1.32
NPHP3-205ENST00000471145 KIF2CQ99661 725 aa6.82□□□□□ -1.32
NPHP3-205ENST00000471145 TBX22Q9Y458 520 aa6.82□□□□□ -1.32
NPHP3-205ENST00000471145 MAPKBP1O60336 1514 aa6.81□□□□□ -1.32
NPHP3-205ENST00000471145 YBX3P16989 372 aaKnown RBP eCLIP6.81□□□□□ -1.32
NPHP3-205ENST00000471145 TPP2P29144 1249 aaPredicted RBP6.81□□□□□ -1.32
NPHP3-205ENST00000471145 CASP7P55210 303 aa6.81□□□□□ -1.32
NPHP3-205ENST00000471145 CHMP4BP1P59074 171 aa6.81□□□□□ -1.32
NPHP3-205ENST00000471145 FXNQ16595 210 aa6.81□□□□□ -1.32
NPHP3-205ENST00000471145 CDCP2Q5VXM1 449 aa6.81□□□□□ -1.32
NPHP3-205ENST00000471145 TSPYL5Q86VY4 417 aaPredicted RBP6.81□□□□□ -1.32
NPHP3-205ENST00000471145 ZSWIM9Q86XI8 627 aa6.81□□□□□ -1.32
NPHP3-205ENST00000471145 CREG2Q8IUH2 290 aa6.81□□□□□ -1.32
NPHP3-205ENST00000471145 VWCEQ96DN2 955 aa6.81□□□□□ -1.32
NPHP3-205ENST00000471145 ALPK1Q96QP1 1244 aa6.81□□□□□ -1.32
NPHP3-205ENST00000471145 CNNM2Q9H8M5 875 aa6.81□□□□□ -1.32
NPHP3-205ENST00000471145 FAM53CQ9NYF3 392 aa6.81□□□□□ -1.32
NPHP3-205ENST00000471145 ADAMTS12P58397 1594 aa6.81□□□□□ -1.32
NPHP3-205ENST00000471145 ADGRL1O94910 1474 aa6.8□□□□□ -1.32
NPHP3-205ENST00000471145 LRRN2O75325 713 aa6.8□□□□□ -1.32
NPHP3-205ENST00000471145 TSPOAP1O95153 1857 aa6.8□□□□□ -1.32
NPHP3-205ENST00000471145 KCNMB1Q16558 191 aa6.8□□□□□ -1.32
NPHP3-205ENST00000471145 FAM178BQ8IXR5 827 aa6.8□□□□□ -1.32
NPHP3-205ENST00000471145 MKL1Q969V6 931 aa6.8□□□□□ -1.32
NPHP3-205ENST00000471145 DNAJC7Q99615 494 aa6.8□□□□□ -1.32
NPHP3-205ENST00000471145 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.8□□□□□ -1.32
NPHP3-205ENST00000471145 KANSL2Q9H9L4 492 aa6.8□□□□□ -1.32
NPHP3-205ENST00000471145 C19orf73Q9NVV2 129 aa6.8□□□□□ -1.32
NPHP3-205ENST00000471145 ABCA10Q8WWZ4 1543 aa6.8□□□□□ -1.32
NPHP3-205ENST00000471145 WASH4PA8MWX3 477 aa6.79□□□□□ -1.32
NPHP3-205ENST00000471145 PDPK1O15530 556 aa6.79□□□□□ -1.32
NPHP3-205ENST00000471145 CCNFP41002 786 aa6.79□□□□□ -1.32
NPHP3-205ENST00000471145 TDRD10Q5VZ19 366 aaKnown RBP6.79□□□□□ -1.32
NPHP3-205ENST00000471145 MRM1Q6IN84 353 aaKnown RBP6.79□□□□□ -1.32
NPHP3-205ENST00000471145 SDE2Q6IQ49 451 aa6.79□□□□□ -1.32
NPHP3-205ENST00000471145 ZNF662Q6ZS27 426 aa6.79□□□□□ -1.32
NPHP3-205ENST00000471145 C19orf47Q8N9M1 422 aaKnown RBP6.79□□□□□ -1.32
NPHP3-205ENST00000471145 ENOX1Q8TC92 643 aaKnown RBP6.79□□□□□ -1.32
NPHP3-205ENST00000471145 KIRREL1Q96J84 757 aa6.79□□□□□ -1.32
NPHP3-205ENST00000471145 SLAMF8Q9P0V8 285 aa6.79□□□□□ -1.32
NPHP3-205ENST00000471145 PFDN2Q9UHV9 154 aa6.79□□□□□ -1.32
NPHP3-205ENST00000471145 MSRB2Q9Y3D2 182 aa6.79□□□□□ -1.32
NPHP3-205ENST00000471145 TNFRSF10CO14798 259 aa6.78□□□□□ -1.32
NPHP3-205ENST00000471145 FARP2O94887 1054 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-205ENST00000471145 TP53P04637 393 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-205ENST00000471145 RNF4P78317 190 aa6.78□□□□□ -1.32
NPHP3-205ENST00000471145 FYB2Q5VWT5 728 aa6.78□□□□□ -1.32
NPHP3-205ENST00000471145 KIAA1211LQ6NV74 962 aa6.78□□□□□ -1.32
NPHP3-205ENST00000471145 VHLLQ6RSH7 139 aa6.78□□□□□ -1.32
NPHP3-205ENST00000471145 TMEM192Q8IY95 271 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms