RNA–Protein interactions for RNA: ENST00000471145.1

NPHP3-205, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 435 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-205ENST00000471145 AEBP2Q6ZN18 517 aaPredicted RBP24.65■■□□□ 1.54
NPHP3-205ENST00000471145 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
NPHP3-205ENST00000471145 SENP3Q9H4L4 574 aaPredicted RBP21.02■□□□□ 0.96
NPHP3-205ENST00000471145 PHF23Q9BUL5 403 aaPredicted RBP20.94■□□□□ 0.94
NPHP3-205ENST00000471145 FOXD1Q16676 465 aa19.5■□□□□ 0.71
NPHP3-205ENST00000471145 PLPPR3Q6T4P5 718 aa19.29■□□□□ 0.68
NPHP3-205ENST00000471145 PPP6R1Q9UPN7 881 aa18.55■□□□□ 0.56
NPHP3-205ENST00000471145 ADRA2BP18089 450 aa18.52■□□□□ 0.56
NPHP3-205ENST00000471145 PIAS4Q8N2W9 510 aaPredicted RBP18.31■□□□□ 0.52
NPHP3-205ENST00000471145 MSH5O43196 834 aa18.13■□□□□ 0.49
NPHP3-205ENST00000471145 SCAF1Q9H7N4 1312 aaKnown RBP17.04■□□□□ 0.32
NPHP3-205ENST00000471145 PPP4R3CPQ6ZMV5 832 aa16.95■□□□□ 0.3
NPHP3-205ENST00000471145 POTEDQ86YR6 584 aa16.91■□□□□ 0.3
NPHP3-205ENST00000471145 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
NPHP3-205ENST00000471145 DMRT2Q9Y5R5 561 aa16.73■□□□□ 0.27
NPHP3-205ENST00000471145 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
NPHP3-205ENST00000471145 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
NPHP3-205ENST00000471145 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
NPHP3-205ENST00000471145 RNF216Q9NWF9 866 aaPredicted RBP16.29■□□□□ 0.2
NPHP3-205ENST00000471145 KCNA4P22459 653 aa16.23■□□□□ 0.19
NPHP3-205ENST00000471145 NPM3O75607 178 aaKnown RBP16.18■□□□□ 0.18
NPHP3-205ENST00000471145 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
NPHP3-205ENST00000471145 DNAJC5BQ9UF47 199 aa15.84■□□□□ 0.13
NPHP3-205ENST00000471145 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.52■□□□□ 0.083e-6■□□□□ 11.3
NPHP3-205ENST00000471145 RNF39Q9H2S5 420 aa15.49■□□□□ 0.07
NPHP3-205ENST00000471145 SLC4A1APQ9BWU0 796 aaKnown RBP15.43■□□□□ 0.06
NPHP3-205ENST00000471145 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
NPHP3-205ENST00000471145 C1QBPQ07021 282 aaKnown RBP15.33■□□□□ 0.04
NPHP3-205ENST00000471145 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.04
NPHP3-205ENST00000471145 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
NPHP3-205ENST00000471145 FOXD4L1Q9NU39 408 aa15.04■□□□□ -0
NPHP3-205ENST00000471145 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
NPHP3-205ENST00000471145 HNRNPUL2Q1KMD3 747 aaKnown RBP15.01□□□□□ -0.01
NPHP3-205ENST00000471145 MYCNP04198 464 aaPredicted RBP14.98□□□□□ -0.01
NPHP3-205ENST00000471145 SAMD1Q6SPF0 538 aaPredicted RBP14.93□□□□□ -0.02
NPHP3-205ENST00000471145 APLP2Q06481 763 aa14.92□□□□□ -0.02
NPHP3-205ENST00000471145 ZBTB22O15209 634 aa14.91□□□□□ -0.02
NPHP3-205ENST00000471145 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
NPHP3-205ENST00000471145 CAPN15O75808 1086 aa14.82□□□□□ -0.04
NPHP3-205ENST00000471145 ZNF219Q9P2Y4 722 aaPredicted RBP14.71□□□□□ -0.05
NPHP3-205ENST00000471145 TRHP20396 242 aaPredicted RBP14.68□□□□□ -0.06
NPHP3-205ENST00000471145 CSRNP3Q8WYN3 585 aa14.65□□□□□ -0.06
NPHP3-205ENST00000471145 DSG3P32926 999 aa14.64□□□□□ -0.07
NPHP3-205ENST00000471145 EHMT2Q96KQ7 1210 aa14.64□□□□□ -0.07
NPHP3-205ENST00000471145 ATXN8OSP0DMR3 200 aa14.6□□□□□ -0.07
NPHP3-205ENST00000471145 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
NPHP3-205ENST00000471145 ABCB7O75027 752 aa14.47□□□□□ -0.09
NPHP3-205ENST00000471145 POLA2Q14181 598 aa14.4□□□□□ -0.1
NPHP3-205ENST00000471145 ZBTB12Q9Y330 459 aaPredicted RBP14.2□□□□□ -0.14
NPHP3-205ENST00000471145 FBLN2P98095 1184 aa14.01□□□□□ -0.17
NPHP3-205ENST00000471145 RBM42Q9BTD8 480 aaKnown RBP14□□□□□ -0.17
NPHP3-205ENST00000471145 MKRN4PQ13434 485 aaPredicted RBP13.91□□□□□ -0.18
NPHP3-205ENST00000471145 OSCARQ8IYS5 282 aa13.88□□□□□ -0.19
NPHP3-205ENST00000471145 SPDYE2BA6NHP3 402 aa13.78□□□□□ -0.2
NPHP3-205ENST00000471145 SPDYE6P0CI01 402 aa13.78□□□□□ -0.2
NPHP3-205ENST00000471145 SPDYE2Q495Y8 402 aa13.78□□□□□ -0.2
NPHP3-205ENST00000471145 AKT1S1Q96B36 256 aa13.77□□□□□ -0.21
NPHP3-205ENST00000471145 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
NPHP3-205ENST00000471145 SSUH2Q9Y2M2 353 aa13.62□□□□□ -0.23
NPHP3-205ENST00000471145 REM2Q8IYK8 340 aaPredicted RBP13.61□□□□□ -0.23
NPHP3-205ENST00000471145 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
NPHP3-205ENST00000471145 CHRDL2Q6WN34 429 aa13.48□□□□□ -0.25
NPHP3-205ENST00000471145 PABPN1Q86U42 306 aaKnown RBP eCLIP13.46□□□□□ -0.25
NPHP3-205ENST00000471145 PITPNM1O00562 1244 aa13.43□□□□□ -0.26
NPHP3-205ENST00000471145 SPDYE1Q8NFV5 336 aaPredicted RBP13.43□□□□□ -0.26
NPHP3-205ENST00000471145 POTEHQ6S545 545 aa13.34□□□□□ -0.27
NPHP3-205ENST00000471145 CLEC11AQ9Y240 323 aa13.34□□□□□ -0.27
NPHP3-205ENST00000471145 FXR2P51116 673 aaKnown RBP eCLIP13.27□□□□□ -0.29
NPHP3-205ENST00000471145 PROM2Q8N271 834 aa13.26□□□□□ -0.29
NPHP3-205ENST00000471145 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
NPHP3-205ENST00000471145 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
NPHP3-205ENST00000471145 FKBP8Q14318 412 aa13.24□□□□□ -0.29
NPHP3-205ENST00000471145 PRR29P0C7W0 189 aa13.22□□□□□ -0.29
NPHP3-205ENST00000471145 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
NPHP3-205ENST00000471145 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
NPHP3-205ENST00000471145 CREBZFQ9NS37 354 aa12.96□□□□□ -0.33
NPHP3-205ENST00000471145 FBXO3Q9UK99 471 aa12.93□□□□□ -0.34
NPHP3-205ENST00000471145 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
NPHP3-205ENST00000471145 HAX1O00165 279 aa12.91□□□□□ -0.34
NPHP3-205ENST00000471145 MIER1Q8N108 512 aa12.85□□□□□ -0.35
NPHP3-205ENST00000471145 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
NPHP3-205ENST00000471145 C19orf67A6NJJ6 358 aa12.82□□□□□ -0.36
NPHP3-205ENST00000471145 NPM1P06748 294 aaKnown RBP eCLIP12.8□□□□□ -0.36
NPHP3-205ENST00000471145 MNX1P50219 401 aaPredicted RBP12.8□□□□□ -0.36
NPHP3-205ENST00000471145 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
NPHP3-205ENST00000471145 EVX2Q03828 476 aa12.74□□□□□ -0.37
NPHP3-205ENST00000471145 CD44P16070 742 aaKnown RBP12.72□□□□□ -0.37
NPHP3-205ENST00000471145 SP7Q8TDD2 431 aaPredicted RBP12.72□□□□□ -0.37
NPHP3-205ENST00000471145 ZBTB47Q9UFB7 747 aaPredicted RBP12.72□□□□□ -0.37
NPHP3-205ENST00000471145 VASPP50552 380 aaPredicted RBP12.7□□□□□ -0.38
NPHP3-205ENST00000471145 PAK3O75914 559 aaPredicted RBP12.63□□□□□ -0.39
NPHP3-205ENST00000471145 ZRANB1Q9UGI0 708 aa12.6□□□□□ -0.39
NPHP3-205ENST00000471145 CLCN6P51797 869 aa12.57□□□□□ -0.4
NPHP3-205ENST00000471145 KLHL34Q8N239 644 aa12.55□□□□□ -0.4
NPHP3-205ENST00000471145 ZNF579Q8NAF0 562 aaKnown RBP12.55□□□□□ -0.4
NPHP3-205ENST00000471145 NUBP1P53384 320 aa12.53□□□□□ -0.4
NPHP3-205ENST00000471145 RASEFQ8IZ41 740 aa12.52□□□□□ -0.41
NPHP3-205ENST00000471145 GABBR2O75899 941 aa12.51□□□□□ -0.41
NPHP3-205ENST00000471145 TSPYL2Q9H2G4 693 aaPredicted RBP12.51□□□□□ -0.41
NPHP3-205ENST00000471145 IFNLR1Q8IU57 520 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms