RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 FEM1BQ9UK73 627 aa17.61■□□□□ 0.41
SDCCAG3-209ENST00000468963 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.61■□□□□ 0.41
SDCCAG3-209ENST00000468963 PLIN4Q96Q06 1357 aa17.61■□□□□ 0.41
SDCCAG3-209ENST00000468963 DNAJC25-GNG10A0A024R161 153 aa17.6■□□□□ 0.41
SDCCAG3-209ENST00000468963 ZBED4O75132 1171 aa17.6■□□□□ 0.41
SDCCAG3-209ENST00000468963 SLC3A2P08195 630 aaKnown RBP17.6■□□□□ 0.41
SDCCAG3-209ENST00000468963 ZNF865P0CJ78 1059 aaPredicted RBP17.6■□□□□ 0.41
SDCCAG3-209ENST00000468963 TSPY3P0CV98 308 aa17.6■□□□□ 0.41
SDCCAG3-209ENST00000468963 TSPY8P0CW00 308 aa17.6■□□□□ 0.41
SDCCAG3-209ENST00000468963 LRRC41Q15345 812 aa17.6■□□□□ 0.41
SDCCAG3-209ENST00000468963 SLFN13Q68D06 897 aa17.6■□□□□ 0.41
SDCCAG3-209ENST00000468963 SNRNP48Q6IEG0 339 aaKnown RBP17.6■□□□□ 0.41
SDCCAG3-209ENST00000468963 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.6■□□□□ 0.41
SDCCAG3-209ENST00000468963 TDHQ8IZJ6 230 aa17.6■□□□□ 0.41
SDCCAG3-209ENST00000468963 UBE2OQ9C0C9 1292 aaKnown RBP17.6■□□□□ 0.41
SDCCAG3-209ENST00000468963 INCENPQ9NQS7 918 aa17.6■□□□□ 0.41
SDCCAG3-209ENST00000468963 TACC3Q9Y6A5 838 aa17.6■□□□□ 0.41
SDCCAG3-209ENST00000468963 MYH4Q9Y623 1939 aa17.59■□□□□ 0.41
SDCCAG3-209ENST00000468963 RTP1P59025 263 aa17.59■□□□□ 0.41
SDCCAG3-209ENST00000468963 ALX1Q15699 326 aa17.59■□□□□ 0.41
SDCCAG3-209ENST00000468963 VPS53Q5VIR6 699 aa17.59■□□□□ 0.41
SDCCAG3-209ENST00000468963 CPXCR1Q8N123 301 aa17.59■□□□□ 0.41
SDCCAG3-209ENST00000468963 LRRC47Q8N1G4 583 aaKnown RBP17.59■□□□□ 0.41
SDCCAG3-209ENST00000468963 KIFC2Q96AC6 838 aa17.59■□□□□ 0.41
SDCCAG3-209ENST00000468963 ZBTB47Q9UFB7 747 aaPredicted RBP17.59■□□□□ 0.41
SDCCAG3-209ENST00000468963 ANAPC4Q9UJX5 808 aa17.59■□□□□ 0.41
SDCCAG3-209ENST00000468963 COL6A3P12111 3177 aa17.59■□□□□ 0.41
SDCCAG3-209ENST00000468963 KBTBD13C9JR72 458 aa17.58■□□□□ 0.4
SDCCAG3-209ENST00000468963 SNAI1O95863 264 aaPredicted RBP17.58■□□□□ 0.4
SDCCAG3-209ENST00000468963 BMP3P12645 472 aa17.58■□□□□ 0.4
SDCCAG3-209ENST00000468963 ADCYAP1R1P41586 468 aa17.58■□□□□ 0.4
SDCCAG3-209ENST00000468963 MDM2Q00987 491 aaPredicted RBP17.58■□□□□ 0.4
SDCCAG3-209ENST00000468963 CTDSPL2Q05D32 466 aa17.58■□□□□ 0.4
SDCCAG3-209ENST00000468963 SNX17Q15036 470 aa17.58■□□□□ 0.4
SDCCAG3-209ENST00000468963 GPR153Q6NV75 609 aa17.58■□□□□ 0.4
SDCCAG3-209ENST00000468963 MAMDC4Q6UXC1 1216 aa17.58■□□□□ 0.4
SDCCAG3-209ENST00000468963 TICAM2Q86XR7 235 aa17.58■□□□□ 0.4
SDCCAG3-209ENST00000468963 MSL3Q8N5Y2 521 aaKnown RBP17.58■□□□□ 0.4
SDCCAG3-209ENST00000468963 DDX11Q96FC9 970 aa17.58■□□□□ 0.4
SDCCAG3-209ENST00000468963 RAVER2Q9HCJ3 691 aaKnown RBP17.58■□□□□ 0.4
SDCCAG3-209ENST00000468963 IL17RBQ9NRM6 502 aa17.58■□□□□ 0.4
SDCCAG3-209ENST00000468963 HELLSQ9NRZ9 838 aa17.58■□□□□ 0.4
SDCCAG3-209ENST00000468963 PLXNA1Q9UIW2 1896 aa17.57■□□□□ 0.4
SDCCAG3-209ENST00000468963 FGRP09769 529 aa17.57■□□□□ 0.4
SDCCAG3-209ENST00000468963 FDX1P10109 184 aa17.57■□□□□ 0.4
SDCCAG3-209ENST00000468963 RARBP10826 455 aa17.57■□□□□ 0.4
SDCCAG3-209ENST00000468963 NOVP48745 357 aa17.57■□□□□ 0.4
SDCCAG3-209ENST00000468963 OAZ1P54368 228 aa17.57■□□□□ 0.4
SDCCAG3-209ENST00000468963 C1orf53Q5VUE5 145 aa17.57■□□□□ 0.4
SDCCAG3-209ENST00000468963 A0A0C4DFX4 3053 aa17.56■□□□□ 0.4
SDCCAG3-209ENST00000468963 TMEM232C9JQI7 657 aa17.56■□□□□ 0.4
SDCCAG3-209ENST00000468963 SLC4A3P48751 1232 aa17.56■□□□□ 0.4
SDCCAG3-209ENST00000468963 AAMPQ13685 434 aa17.56■□□□□ 0.4
SDCCAG3-209ENST00000468963 ZNF467Q7Z7K2 595 aaPredicted RBP17.56■□□□□ 0.4
SDCCAG3-209ENST00000468963 CHST13Q8NET6 341 aa17.56■□□□□ 0.4
SDCCAG3-209ENST00000468963 CHURC1Q8WUH1 139 aa17.56■□□□□ 0.4
SDCCAG3-209ENST00000468963 STAG1Q8WVM7 1258 aa17.56■□□□□ 0.4
SDCCAG3-209ENST00000468963 FERMT2Q96AC1 680 aa17.56■□□□□ 0.4
SDCCAG3-209ENST00000468963 GMCL1Q96IK5 515 aa17.56■□□□□ 0.4
SDCCAG3-209ENST00000468963 FGD4Q96M96 766 aa17.56■□□□□ 0.4
SDCCAG3-209ENST00000468963 XPNPEP3Q9NQH7 507 aa17.56■□□□□ 0.4
SDCCAG3-209ENST00000468963 PHF24Q9UPV7 400 aa17.56■□□□□ 0.4
SDCCAG3-209ENST00000468963 ATP11BQ9Y2G3 1177 aa17.56■□□□□ 0.4
SDCCAG3-209ENST00000468963 CTDP1Q9Y5B0 961 aaPredicted RBP17.56■□□□□ 0.4
SDCCAG3-209ENST00000468963 SYNGAP1Q96PV0 1343 aa17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 ORC4O43929 436 aa17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 NMT2O60551 498 aa17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 PLA2G6O60733 806 aa17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 PGK1P00558 417 aa17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 FGAP02671 866 aa17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 AKR1A1P14550 325 aa17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 MCCP23508 829 aa17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 MCMDC2Q4G0Z9 681 aa17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 PPP4R3BQ5MIZ7 849 aa17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 RCSD1Q6JBY9 416 aa17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 SMC5Q8IY18 1101 aa17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 FAM227BQ96M60 508 aa17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 FBXO40Q9UH90 709 aa17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 CNPY2Q9Y2B0 182 aa17.55■□□□□ 0.4
SDCCAG3-209ENST00000468963 TSPY2A6NKD2 308 aa17.54■□□□□ 0.4
SDCCAG3-209ENST00000468963 ADAMTS4O75173 837 aa17.54■□□□□ 0.4
SDCCAG3-209ENST00000468963 SLC1A4P43007 532 aa17.54■□□□□ 0.4
SDCCAG3-209ENST00000468963 TRIM60Q495X7 471 aa17.54■□□□□ 0.4
SDCCAG3-209ENST00000468963 RNF180Q86T96 592 aa17.54■□□□□ 0.4
SDCCAG3-209ENST00000468963 FAM160B2Q86V87 743 aa17.54■□□□□ 0.4
SDCCAG3-209ENST00000468963 LBHD1Q9BQE6 289 aaPredicted RBP17.54■□□□□ 0.4
SDCCAG3-209ENST00000468963 FAM184BQ9ULE4 1060 aa17.54■□□□□ 0.4
SDCCAG3-209ENST00000468963 ZNF536O15090 1300 aa17.53■□□□□ 0.4
SDCCAG3-209ENST00000468963 A0A0D9SFI3 127 aa17.53■□□□□ 0.4
SDCCAG3-209ENST00000468963 RANBP6O60518 1105 aaKnown RBP17.53■□□□□ 0.4
SDCCAG3-209ENST00000468963 STAT2P52630 851 aa17.53■□□□□ 0.4
SDCCAG3-209ENST00000468963 ANKRD35Q8N283 1001 aa17.53■□□□□ 0.4
SDCCAG3-209ENST00000468963 KLHDC9Q8NEP7 349 aa17.53■□□□□ 0.4
SDCCAG3-209ENST00000468963 TSEN34Q9BSV6 310 aaKnown RBP17.53■□□□□ 0.4
SDCCAG3-209ENST00000468963 LNPKQ9C0E8 428 aa17.53■□□□□ 0.4
SDCCAG3-209ENST00000468963 RWDD1Q9H446 243 aaPredicted RBP17.53■□□□□ 0.4
SDCCAG3-209ENST00000468963 PRKAG2Q9UGJ0 569 aa17.53■□□□□ 0.4
SDCCAG3-209ENST00000468963 STX8Q9UNK0 236 aa17.53■□□□□ 0.4
SDCCAG3-209ENST00000468963 IGHDP01880 384 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms