RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 GJB1P08034 283 aa21.97■■□□□ 1.11
YBX1-204ENST00000467957 EN2P19622 333 aaPredicted RBP21.97■■□□□ 1.11
YBX1-204ENST00000467957 STAT2P52630 851 aa21.97■■□□□ 1.11
YBX1-204ENST00000467957 IQCA1Q86XH1 822 aa21.97■■□□□ 1.11
YBX1-204ENST00000467957 NCAPG2Q86XI2 1143 aa21.97■■□□□ 1.11
YBX1-204ENST00000467957 DCAF4Q8WV16 495 aa21.97■■□□□ 1.11
YBX1-204ENST00000467957 KIFC2Q96AC6 838 aa21.97■■□□□ 1.11
YBX1-204ENST00000467957 ESYT1Q9BSJ8 1104 aa21.97■■□□□ 1.11
YBX1-204ENST00000467957 TEX13BQ9BXU2 312 aa21.97■■□□□ 1.11
YBX1-204ENST00000467957 RNF208Q9H0X6 261 aa21.97■■□□□ 1.11
YBX1-204ENST00000467957 SLC38A10Q9HBR0 1119 aa21.97■■□□□ 1.11
YBX1-204ENST00000467957 CYP21A2P08686 494 aa21.96■■□□□ 1.11
YBX1-204ENST00000467957 ZKSCAN1P17029 563 aaPredicted RBP21.96■■□□□ 1.11
YBX1-204ENST00000467957 MAP3K21Q5TCX8 1036 aa21.96■■□□□ 1.11
YBX1-204ENST00000467957 ANKS1AQ92625 1134 aa21.96■■□□□ 1.11
YBX1-204ENST00000467957 UNC93B1Q9H1C4 597 aa21.96■■□□□ 1.11
YBX1-204ENST00000467957 ZSWIM5Q9P217 1185 aa21.96■■□□□ 1.11
YBX1-204ENST00000467957 CAPN2P17655 700 aa21.95■■□□□ 1.1
YBX1-204ENST00000467957 ADORA2AP29274 412 aa21.95■■□□□ 1.1
YBX1-204ENST00000467957 GJA8P48165 433 aa21.95■■□□□ 1.1
YBX1-204ENST00000467957 OAZ1P54368 228 aa21.95■■□□□ 1.1
YBX1-204ENST00000467957 KIAA1211Q6ZU35 1233 aa21.95■■□□□ 1.1
YBX1-204ENST00000467957 PAK6Q9NQU5 681 aaPredicted RBP21.95■■□□□ 1.1
YBX1-204ENST00000467957 FCER1AP12319 257 aa21.94■■□□□ 1.1
YBX1-204ENST00000467957 CCL14Q16627 93 aa21.94■■□□□ 1.1
YBX1-204ENST00000467957 KCTD1Q719H9 257 aa21.94■■□□□ 1.1
YBX1-204ENST00000467957 ZSCAN10Q96SZ4 725 aaPredicted RBP21.94■■□□□ 1.1
YBX1-204ENST00000467957 ZKSCAN3Q9BRR0 538 aa21.94■■□□□ 1.1
YBX1-204ENST00000467957 LSG1Q9H089 658 aaKnown RBP21.94■■□□□ 1.1
YBX1-204ENST00000467957 PPP4R2Q9NY27 417 aa21.94■■□□□ 1.1
YBX1-204ENST00000467957 RPTORQ8N122 1335 aa21.94■■□□□ 1.1
YBX1-204ENST00000467957 IGHA2P01877 340 aa21.93■■□□□ 1.1
YBX1-204ENST00000467957 SNHG28P0DPA3 235 aa21.93■■□□□ 1.1
YBX1-204ENST00000467957 TRIM32Q13049 653 aa21.93■■□□□ 1.1
YBX1-204ENST00000467957 TRDNQ13061 729 aa21.93■■□□□ 1.1
YBX1-204ENST00000467957 SNRNP48Q6IEG0 339 aaKnown RBP21.93■■□□□ 1.1
YBX1-204ENST00000467957 BTNL9Q6UXG8 535 aa21.93■■□□□ 1.1
YBX1-204ENST00000467957 RASGRP2Q7LDG7 609 aa21.93■■□□□ 1.1
YBX1-204ENST00000467957 DPP9Q86TI2 863 aa21.93■■□□□ 1.1
YBX1-204ENST00000467957 NPLOC4Q8TAT6 608 aa21.93■■□□□ 1.1
YBX1-204ENST00000467957 SLC5A4Q9NY91 659 aa21.93■■□□□ 1.1
YBX1-204ENST00000467957 ISY1Q9ULR0 285 aaKnown RBP21.93■■□□□ 1.1
YBX1-204ENST00000467957 CTDP1Q9Y5B0 961 aaPredicted RBP21.93■■□□□ 1.1
YBX1-204ENST00000467957 RBM8AQ9Y5S9 174 aaKnown RBP21.93■■□□□ 1.1
YBX1-204ENST00000467957 PDHBP11177 359 aa21.92■■□□□ 1.1
YBX1-204ENST00000467957 IKQ13123 557 aaPredicted RBP21.92■■□□□ 1.1
YBX1-204ENST00000467957 CCDC96Q2M329 555 aa21.92■■□□□ 1.1
YBX1-204ENST00000467957 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.92■■□□□ 1.1
YBX1-204ENST00000467957 CHMP4CQ96CF2 233 aa21.92■■□□□ 1.1
YBX1-204ENST00000467957 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.92■■□□□ 1.12e-11■■■■■ 64.9
YBX1-204ENST00000467957 HMX1Q9NP08 348 aaPredicted RBP21.92■■□□□ 1.1
YBX1-204ENST00000467957 PRR12Q9ULL5 1215 aa21.92■■□□□ 1.1
YBX1-204ENST00000467957 RIPK3Q9Y572 518 aa21.92■■□□□ 1.1
YBX1-204ENST00000467957 TNKSO95271 1327 aa21.91■■□□□ 1.1
YBX1-204ENST00000467957 ZNFX1Q9P2E3 1918 aaKnown RBP21.91■■□□□ 1.1
YBX1-204ENST00000467957 COBLO75128 1261 aa21.91■■□□□ 1.1
YBX1-204ENST00000467957 SGPL1O95470 568 aa21.91■■□□□ 1.1
YBX1-204ENST00000467957 PRKAR2AP13861 404 aaKnown RBP21.91■■□□□ 1.1
YBX1-204ENST00000467957 CACNB2Q08289 660 aaPredicted RBP21.91■■□□□ 1.1
YBX1-204ENST00000467957 OLFML2BQ68BL8 750 aa21.91■■□□□ 1.1
YBX1-204ENST00000467957 CPXCR1Q8N123 301 aa21.91■■□□□ 1.1
YBX1-204ENST00000467957 ENAHQ8N8S7 591 aaPredicted RBP21.91■■□□□ 1.1
YBX1-204ENST00000467957 U2AF1L4Q8WU68 220 aaKnown RBP21.91■■□□□ 1.1
YBX1-204ENST00000467957 SHISA4Q96DD7 197 aa21.91■■□□□ 1.1
YBX1-204ENST00000467957 MMP19Q99542 508 aa21.91■■□□□ 1.1
YBX1-204ENST00000467957 UBAC1Q9BSL1 405 aa21.91■■□□□ 1.1
YBX1-204ENST00000467957 RAVER2Q9HCJ3 691 aaKnown RBP21.91■■□□□ 1.1
YBX1-204ENST00000467957 FLRT1Q9NZU1 646 aa21.91■■□□□ 1.1
YBX1-204ENST00000467957 MTMR7Q9Y216 660 aa21.91■■□□□ 1.1
YBX1-204ENST00000467957 BRCA2P51587 3418 aa21.9■■□□□ 1.1
YBX1-204ENST00000467957 E7EWF7 191 aa21.9■■□□□ 1.1
YBX1-204ENST00000467957 CDC45O75419 566 aa21.9■■□□□ 1.1
YBX1-204ENST00000467957 ZNF543Q08ER8 600 aa21.9■■□□□ 1.1
YBX1-204ENST00000467957 KCTD2Q14681 263 aa21.9■■□□□ 1.1
YBX1-204ENST00000467957 MFSD14CQ5VZR4 134 aa21.9■■□□□ 1.1
YBX1-204ENST00000467957 CASC1Q6TDU7 716 aa21.9■■□□□ 1.1
YBX1-204ENST00000467957 PNMA1Q8ND90 353 aa21.9■■□□□ 1.1
YBX1-204ENST00000467957 KAT14Q9H8E8 782 aa21.9■■□□□ 1.1
YBX1-204ENST00000467957 TAF6LQ9Y6J9 622 aa21.9■■□□□ 1.1
YBX1-204ENST00000467957 ZNF536O15090 1300 aa21.89■■□□□ 1.1
YBX1-204ENST00000467957 TTBK2Q6IQ55 1244 aa21.89■■□□□ 1.09
YBX1-204ENST00000467957 CYB5R4Q7L1T6 521 aa21.89■■□□□ 1.09
YBX1-204ENST00000467957 CHST13Q8NET6 341 aa21.89■■□□□ 1.09
YBX1-204ENST00000467957 NCOA7Q8NI08 942 aa21.89■■□□□ 1.09
YBX1-204ENST00000467957 DEFB118Q96PH6 123 aa21.89■■□□□ 1.09
YBX1-204ENST00000467957 CRISPLD2Q9H0B8 497 aa21.89■■□□□ 1.09
YBX1-204ENST00000467957 FBXO40Q9UH90 709 aa21.89■■□□□ 1.09
YBX1-204ENST00000467957 DIS3Q9Y2L1 958 aaKnown RBP21.89■■□□□ 1.09
YBX1-204ENST00000467957 TNRC18O15417 2968 aaPredicted RBP21.89■■□□□ 1.09
YBX1-204ENST00000467957 FRMPD2Q68DX3 1309 aaPredicted RBP21.88■■□□□ 1.09
YBX1-204ENST00000467957 SEC23AQ15436 765 aa21.88■■□□□ 1.09
YBX1-204ENST00000467957 GPATCH4Q5T3I0 446 aaKnown RBP21.88■■□□□ 1.09
YBX1-204ENST00000467957 SYDE2Q5VT97 1194 aa21.88■■□□□ 1.09
YBX1-204ENST00000467957 STOX1Q6ZVD7 989 aa21.88■■□□□ 1.09
YBX1-204ENST00000467957 RANBP17Q9H2T7 1088 aaKnown RBP21.88■■□□□ 1.09
YBX1-204ENST00000467957 ANO2Q9NQ90 1003 aa21.88■■□□□ 1.09
YBX1-204ENST00000467957 NECTIN1Q15223 517 aa21.87■■□□□ 1.09
YBX1-204ENST00000467957 TKFCQ3LXA3 575 aa21.87■■□□□ 1.09
YBX1-204ENST00000467957 RALYLQ86SE5 291 aaKnown RBP21.87■■□□□ 1.09
YBX1-204ENST00000467957 MAML3Q96JK9 1138 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms