RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 LRRC41Q15345 812 aa13.01□□□□□ -0.33
PRPF3-203ENST00000467514 FAM47AQ5JRC9 791 aa13.01□□□□□ -0.33
PRPF3-203ENST00000467514 OLFML2BQ68BL8 750 aa13.01□□□□□ -0.33
PRPF3-203ENST00000467514 CREB3L3Q68CJ9 461 aa13.01□□□□□ -0.33
PRPF3-203ENST00000467514 RNF180Q86T96 592 aa13.01□□□□□ -0.33
PRPF3-203ENST00000467514 NCAPG2Q86XI2 1143 aa13.01□□□□□ -0.33
PRPF3-203ENST00000467514 ADAMTS19Q8TE59 1207 aa13.01□□□□□ -0.33
PRPF3-203ENST00000467514 C12orf42Q96LP6 360 aa13.01□□□□□ -0.33
PRPF3-203ENST00000467514 UHRF1Q96T88 793 aaPredicted RBP13.01□□□□□ -0.33
PRPF3-203ENST00000467514 TM6SF1Q9BZW5 370 aa13.01□□□□□ -0.33
PRPF3-203ENST00000467514 XPNPEP3Q9NQH7 507 aa13.01□□□□□ -0.33
PRPF3-203ENST00000467514 ZNF532Q9HCE3 1301 aa13.01□□□□□ -0.33
PRPF3-203ENST00000467514 MYO5AQ9Y4I1 1855 aaKnown RBP13.01□□□□□ -0.33
PRPF3-203ENST00000467514 ZNF236Q9UL36 1845 aa13□□□□□ -0.33
PRPF3-203ENST00000467514 SPDYE16A6NNV3 312 aaPredicted RBP13□□□□□ -0.33
PRPF3-203ENST00000467514 MPHOSPH10O00566 681 aaKnown RBP13□□□□□ -0.33
PRPF3-203ENST00000467514 STRNO43815 780 aa13□□□□□ -0.33
PRPF3-203ENST00000467514 HSPD1P10809 573 aaKnown RBP13□□□□□ -0.33
PRPF3-203ENST00000467514 IGFBP4P22692 258 aa13□□□□□ -0.33
PRPF3-203ENST00000467514 SLC4A3P48751 1232 aa13□□□□□ -0.33
PRPF3-203ENST00000467514 SNX17Q15036 470 aa13□□□□□ -0.33
PRPF3-203ENST00000467514 ABCB5Q2M3G0 1257 aa13□□□□□ -0.33
PRPF3-203ENST00000467514 CERKLQ49MI3 558 aaPredicted RBP13□□□□□ -0.33
PRPF3-203ENST00000467514 PRAMEF19Q5SWL8 479 aa13□□□□□ -0.33
PRPF3-203ENST00000467514 VPS53Q5VIR6 699 aa13□□□□□ -0.33
PRPF3-203ENST00000467514 CCDC174Q6PII3 467 aa13□□□□□ -0.33
PRPF3-203ENST00000467514 TMED8Q6PL24 325 aaPredicted RBP13□□□□□ -0.33
PRPF3-203ENST00000467514 ATXN2LQ8WWM7 1075 aaKnown RBP13□□□□□ -0.33
PRPF3-203ENST00000467514 TSPYL2Q9H2G4 693 aaPredicted RBP13□□□□□ -0.33
PRPF3-203ENST00000467514 TAF6LQ9Y6J9 622 aa13□□□□□ -0.33
PRPF3-203ENST00000467514 MUC3AQ02505 3323 aa13□□□□□ -0.33
PRPF3-203ENST00000467514 MYO9BQ13459 2157 aa12.99□□□□□ -0.33
PRPF3-203ENST00000467514 DCDC2CA8MYV0 355 aa12.99□□□□□ -0.33
PRPF3-203ENST00000467514 GPAA1O43292 621 aa12.99□□□□□ -0.33
PRPF3-203ENST00000467514 KCNA4P22459 653 aa12.99□□□□□ -0.33
PRPF3-203ENST00000467514 MRPS5P82675 430 aaKnown RBP12.99□□□□□ -0.33
PRPF3-203ENST00000467514 CCDC85BQ15834 202 aaPredicted RBP12.99□□□□□ -0.33
PRPF3-203ENST00000467514 POTEEQ6S8J3 1075 aa12.99□□□□□ -0.33
PRPF3-203ENST00000467514 MAGEB6Q8N7X4 407 aa12.99□□□□□ -0.33
PRPF3-203ENST00000467514 STRBPQ96SI9 672 aaKnown RBP12.99□□□□□ -0.33
PRPF3-203ENST00000467514 MOV10L1Q9BXT6 1211 aaKnown RBP12.99□□□□□ -0.33
PRPF3-203ENST00000467514 SPATC1LQ9H0A9 340 aa12.99□□□□□ -0.33
PRPF3-203ENST00000467514 KIAA1683Q9H0B3 1180 aa12.99□□□□□ -0.33
PRPF3-203ENST00000467514 SERPINB13Q9UIV8 391 aa12.99□□□□□ -0.33
PRPF3-203ENST00000467514 PLXNA1Q9UIW2 1896 aa12.98□□□□□ -0.33
PRPF3-203ENST00000467514 ERCC3P19447 782 aa12.98□□□□□ -0.33
PRPF3-203ENST00000467514 CYP7A1P22680 504 aa12.98□□□□□ -0.33
PRPF3-203ENST00000467514 EPHB4P54760 987 aa12.98□□□□□ -0.33
PRPF3-203ENST00000467514 PPP4CP60510 307 aa12.98□□□□□ -0.33
PRPF3-203ENST00000467514 DYNLL1P63167 89 aaKnown RBP12.98□□□□□ -0.33
PRPF3-203ENST00000467514 LBX2Q6XYB7 198 aa12.98□□□□□ -0.33
PRPF3-203ENST00000467514 TTC6Q86TZ1 520 aa12.98□□□□□ -0.33
PRPF3-203ENST00000467514 METTL16Q86W50 562 aaKnown RBP12.98□□□□□ -0.33
PRPF3-203ENST00000467514 MICALL1Q8N3F8 863 aa12.98□□□□□ -0.33
PRPF3-203ENST00000467514 SLC44A5Q8NCS7 719 aa12.98□□□□□ -0.33
PRPF3-203ENST00000467514 ACER1Q8TDN7 264 aa12.98□□□□□ -0.33
PRPF3-203ENST00000467514 TTC14Q96N46 770 aa12.98□□□□□ -0.33
PRPF3-203ENST00000467514 ASB2Q96Q27 587 aa12.98□□□□□ -0.33
PRPF3-203ENST00000467514 PRDM12Q9H4Q4 367 aa12.98□□□□□ -0.33
PRPF3-203ENST00000467514 ZSWIM6Q9HCJ5 1215 aa12.98□□□□□ -0.33
PRPF3-203ENST00000467514 HOXC10Q9NYD6 342 aa12.98□□□□□ -0.33
PRPF3-203ENST00000467514 A0A1W2PQ45 241 aaPredicted RBP12.97□□□□□ -0.33
PRPF3-203ENST00000467514 A0A1W2PQY0 241 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 PGK1P00558 417 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 CYP21A2P08686 494 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 FCER1AP12319 257 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 COG2Q14746 738 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 ALX1Q15699 326 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 ADCK5Q3MIX3 580 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 RNF20Q5VTR2 975 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 C1orf53Q5VUE5 145 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 ADGRA1Q86SQ6 560 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 HSCBQ8IWL3 235 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 MIGA1Q8NAN2 632 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 VTI1AQ96AJ9 217 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 MROH8Q9H579 483 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 STARD7Q9NQZ5 370 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 PHF24Q9UPV7 400 aa12.97□□□□□ -0.33
PRPF3-203ENST00000467514 ZMYM6O95789 1325 aa12.96□□□□□ -0.33
PRPF3-203ENST00000467514 K7ELQ4 463 aaPredicted RBP12.96□□□□□ -0.33
PRPF3-203ENST00000467514 KIAA0355O15063 1070 aa12.96□□□□□ -0.33
PRPF3-203ENST00000467514 ST18O60284 1047 aa12.96□□□□□ -0.33
PRPF3-203ENST00000467514 MBD4O95243 580 aa12.96□□□□□ -0.33
PRPF3-203ENST00000467514 POLR3DP05423 398 aaPredicted RBP12.96□□□□□ -0.33
PRPF3-203ENST00000467514 ITGB8P26012 769 aa12.96□□□□□ -0.33
PRPF3-203ENST00000467514 NEK4P51957 841 aa12.96□□□□□ -0.33
PRPF3-203ENST00000467514 PPIGQ13427 754 aaKnown RBP eCLIP12.96□□□□□ -0.334e-6■■□□□ 12.5
PRPF3-203ENST00000467514 COL9A3Q14050 684 aaPredicted RBP12.96□□□□□ -0.33
PRPF3-203ENST00000467514 CERS3Q8IU89 383 aa12.96□□□□□ -0.33
PRPF3-203ENST00000467514 SHCBP1Q8NEM2 672 aa12.96□□□□□ -0.33
PRPF3-203ENST00000467514 NUP133Q8WUM0 1156 aa12.96□□□□□ -0.33
PRPF3-203ENST00000467514 MAML3Q96JK9 1138 aa12.96□□□□□ -0.33
PRPF3-203ENST00000467514 RIOK1Q9BRS2 568 aaKnown RBP12.96□□□□□ -0.33
PRPF3-203ENST00000467514 UPF3BQ9BZI7 483 aaKnown RBP12.96□□□□□ -0.33
PRPF3-203ENST00000467514 MSRAQ9UJ68 235 aa12.96□□□□□ -0.33
PRPF3-203ENST00000467514 HCN4Q9Y3Q4 1203 aa12.96□□□□□ -0.33
PRPF3-203ENST00000467514 SMCHD1A6NHR9 2005 aa12.96□□□□□ -0.34
PRPF3-203ENST00000467514 MYH8P13535 1937 aa12.96□□□□□ -0.34
PRPF3-203ENST00000467514 ZNFX1Q9P2E3 1918 aaKnown RBP12.96□□□□□ -0.34
PRPF3-203ENST00000467514 COBLO75128 1261 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms