RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 F6X3S4 739 aa15.67■□□□□ 0.1
UBR4-210ENST00000466969 COG2Q14746 738 aa15.67■□□□□ 0.1
UBR4-210ENST00000466969 TWISTNBQ3B726 338 aaPredicted RBP15.67■□□□□ 0.1
UBR4-210ENST00000466969 TEX11Q8IYF3 940 aa15.67■□□□□ 0.1
UBR4-210ENST00000466969 NKD2Q969F2 451 aaPredicted RBP15.67■□□□□ 0.1
UBR4-210ENST00000466969 MMP19Q99542 508 aa15.67■□□□□ 0.1
UBR4-210ENST00000466969 KIAA1683Q9H0B3 1180 aa15.67■□□□□ 0.1
UBR4-210ENST00000466969 DNAJC18Q9H819 358 aa15.67■□□□□ 0.1
UBR4-210ENST00000466969 DIS3Q9Y2L1 958 aaKnown RBP15.67■□□□□ 0.1
UBR4-210ENST00000466969 GH2P01242 217 aa15.66■□□□□ 0.1
UBR4-210ENST00000466969 PGK2P07205 417 aa15.66■□□□□ 0.1
UBR4-210ENST00000466969 AVPR2P30518 371 aa15.66■□□□□ 0.1
UBR4-210ENST00000466969 NBL1P41271 181 aa15.66■□□□□ 0.1
UBR4-210ENST00000466969 VCPP55072 806 aaKnown RBP15.66■□□□□ 0.1
UBR4-210ENST00000466969 IRX5P78411 483 aaPredicted RBP15.66■□□□□ 0.1
UBR4-210ENST00000466969 MB21D1Q8N884 522 aa15.66■□□□□ 0.1
UBR4-210ENST00000466969 KLHDC4Q8TBB5 520 aa15.66■□□□□ 0.1
UBR4-210ENST00000466969 VWCEQ96DN2 955 aa15.66■□□□□ 0.1
UBR4-210ENST00000466969 ZHX1Q9UKY1 873 aaPredicted RBP15.66■□□□□ 0.1
UBR4-210ENST00000466969 ZNFX1Q9P2E3 1918 aaKnown RBP15.65■□□□□ 0.1
UBR4-210ENST00000466969 LDHCP07864 332 aa15.65■□□□□ 0.1
UBR4-210ENST00000466969 NUBP1P53384 320 aa15.65■□□□□ 0.1
UBR4-210ENST00000466969 MECOMQ03112 1051 aa15.65■□□□□ 0.1
UBR4-210ENST00000466969 ERICH6Q7L0X2 663 aa15.65■□□□□ 0.1
UBR4-210ENST00000466969 RMDN1Q96DB5 314 aa15.65■□□□□ 0.1
UBR4-210ENST00000466969 PABPC5Q96DU9 382 aaKnown RBP15.65■□□□□ 0.1
UBR4-210ENST00000466969 AGBL1Q96MI9 1066 aa15.65■□□□□ 0.1
UBR4-210ENST00000466969 TGS1Q96RS0 853 aaKnown RBP15.65■□□□□ 0.1
UBR4-210ENST00000466969 ZBED2Q9BTP6 218 aa15.65■□□□□ 0.1
UBR4-210ENST00000466969 CTNNA3Q9UI47 895 aa15.65■□□□□ 0.1
UBR4-210ENST00000466969 CHD6Q8TD26 2715 aa15.65■□□□□ 0.1
UBR4-210ENST00000466969 VPS13AQ96RL7 3174 aa15.64■□□□□ 0.09
UBR4-210ENST00000466969 LCHNA4D1U4 455 aa15.64■□□□□ 0.09
UBR4-210ENST00000466969 B4GALT4O60513 344 aa15.64■□□□□ 0.09
UBR4-210ENST00000466969 GJA9P57773 515 aa15.64■□□□□ 0.09
UBR4-210ENST00000466969 GSTO1P78417 241 aa15.64■□□□□ 0.09
UBR4-210ENST00000466969 ST3GAL2Q16842 350 aa15.64■□□□□ 0.09
UBR4-210ENST00000466969 ZNF792Q3KQV3 632 aa15.64■□□□□ 0.09
UBR4-210ENST00000466969 SLC43A3Q8NBI5 491 aa15.64■□□□□ 0.09
UBR4-210ENST00000466969 KAZALD1Q96I82 304 aa15.64■□□□□ 0.09
UBR4-210ENST00000466969 SEZ6LQ9BYH1 1024 aa15.64■□□□□ 0.09
UBR4-210ENST00000466969 TRPV6Q9H1D0 765 aa15.64■□□□□ 0.09
UBR4-210ENST00000466969 BICC1Q9H694 974 aaKnown RBP15.64■□□□□ 0.09
UBR4-210ENST00000466969 PHKA1P46020 1223 aa15.63■□□□□ 0.09
UBR4-210ENST00000466969 KCNJ6P48051 423 aa15.63■□□□□ 0.09
UBR4-210ENST00000466969 ZXDAP98168 799 aa15.63■□□□□ 0.09
UBR4-210ENST00000466969 ITGA7Q13683 1181 aa15.63■□□□□ 0.09
UBR4-210ENST00000466969 RAB3GAP1Q15042 981 aa15.63■□□□□ 0.09
UBR4-210ENST00000466969 WDR43Q15061 677 aaKnown RBP eCLIP15.63■□□□□ 0.09
UBR4-210ENST00000466969 METTL16Q86W50 562 aaKnown RBP15.63■□□□□ 0.09
UBR4-210ENST00000466969 TANGO6Q9C0B7 1094 aa15.63■□□□□ 0.09
UBR4-210ENST00000466969 CABYRO75952 493 aa15.62■□□□□ 0.09
UBR4-210ENST00000466969 SLC25A27O95847 323 aa15.62■□□□□ 0.09
UBR4-210ENST00000466969 ERVK-21P61565 698 aa15.62■□□□□ 0.09
UBR4-210ENST00000466969 SMAD2Q15796 467 aaKnown RBP15.62■□□□□ 0.09
UBR4-210ENST00000466969 ATP2B3Q16720 1220 aa15.62■□□□□ 0.09
UBR4-210ENST00000466969 PTPROQ16827 1216 aa15.62■□□□□ 0.09
UBR4-210ENST00000466969 RABL6Q3YEC7 729 aaPredicted RBP15.62■□□□□ 0.09
UBR4-210ENST00000466969 MCTP2Q6DN12 878 aa15.62■□□□□ 0.09
UBR4-210ENST00000466969 ATF7IPQ6VMQ6 1270 aa15.62■□□□□ 0.09
UBR4-210ENST00000466969 MSL3Q8N5Y2 521 aaKnown RBP15.62■□□□□ 0.09
UBR4-210ENST00000466969 NOL10Q9BSC4 688 aaKnown RBP15.62■□□□□ 0.09
UBR4-210ENST00000466969 FTOQ9C0B1 505 aaKnown RBP eCLIP15.62■□□□□ 0.09
UBR4-210ENST00000466969 SIL1Q9H173 461 aa15.62■□□□□ 0.09
UBR4-210ENST00000466969 UPF3AQ9H1J1 476 aaKnown RBP15.62■□□□□ 0.09
UBR4-210ENST00000466969 SIPA1L1O43166 1804 aa15.61■□□□□ 0.09
UBR4-210ENST00000466969 GALR2O43603 387 aaPredicted RBP15.61■□□□□ 0.09
UBR4-210ENST00000466969 ALDH1L1O75891 902 aa15.61■□□□□ 0.09
UBR4-210ENST00000466969 PUM1Q14671 1186 aaKnown RBP eCLIP15.61■□□□□ 0.09
UBR4-210ENST00000466969 ACAP1Q15027 740 aa15.61■□□□□ 0.09
UBR4-210ENST00000466969 TIGD5Q53EQ6 642 aa15.61■□□□□ 0.09
UBR4-210ENST00000466969 CXCL17Q6UXB2 119 aa15.61■□□□□ 0.09
UBR4-210ENST00000466969 ACER1Q8TDN7 264 aa15.61■□□□□ 0.09
UBR4-210ENST00000466969 TSR2Q969E8 191 aaKnown RBP15.61■□□□□ 0.09
UBR4-210ENST00000466969 CRBNQ96SW2 442 aa15.61■□□□□ 0.09
UBR4-210ENST00000466969 CLDND1Q9NY35 253 aa15.61■□□□□ 0.09
UBR4-210ENST00000466969 EYA2O00167 538 aa15.6■□□□□ 0.09
UBR4-210ENST00000466969 STXBP3O00186 592 aa15.6■□□□□ 0.09
UBR4-210ENST00000466969 BAIAP3O94812 1187 aa15.6■□□□□ 0.09
UBR4-210ENST00000466969 HLA-DOAP06340 250 aa15.6■□□□□ 0.09
UBR4-210ENST00000466969 RFC2P35250 354 aa15.6■□□□□ 0.09
UBR4-210ENST00000466969 SIGLEC14Q08ET2 396 aa15.6■□□□□ 0.09
UBR4-210ENST00000466969 SH3RF3Q8TEJ3 882 aaPredicted RBP15.6■□□□□ 0.09
UBR4-210ENST00000466969 MRPL38Q96DV4 380 aaKnown RBP15.6■□□□□ 0.09
UBR4-210ENST00000466969 DMXL1Q9Y485 3027 aa15.6■□□□□ 0.09
UBR4-210ENST00000466969 A0A1B0GUL7 405 aa15.59■□□□□ 0.09
UBR4-210ENST00000466969 SNAI1O95863 264 aaPredicted RBP15.59■□□□□ 0.09
UBR4-210ENST00000466969 NBPF7P0C2Y1 421 aaPredicted RBP15.59■□□□□ 0.09
UBR4-210ENST00000466969 BANK1Q8NDB2 785 aa15.59■□□□□ 0.09
UBR4-210ENST00000466969 SRCIN1Q9C0H9 1055 aa15.59■□□□□ 0.09
UBR4-210ENST00000466969 PALD1Q9ULE6 856 aa15.59■□□□□ 0.09
UBR4-210ENST00000466969 ZBTB22O15209 634 aa15.58■□□□□ 0.08
UBR4-210ENST00000466969 SUPT20HL2P0C7V6 817 aa15.58■□□□□ 0.08
UBR4-210ENST00000466969 DSG3P32926 999 aa15.58■□□□□ 0.08
UBR4-210ENST00000466969 BEX3Q00994 111 aa15.58■□□□□ 0.08
UBR4-210ENST00000466969 ACVR2BQ13705 512 aa15.58■□□□□ 0.08
UBR4-210ENST00000466969 RASGRF1Q13972 1273 aa15.58■□□□□ 0.08
UBR4-210ENST00000466969 CCDC102BQ68D86 513 aa15.58■□□□□ 0.08
UBR4-210ENST00000466969 SLC4A10Q6U841 1118 aa15.58■□□□□ 0.08
UBR4-210ENST00000466969 FRMD5Q7Z6J6 570 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms