RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 NKX2-3Q8TAU0 364 aa17.53■□□□□ 0.4
SNED1-208ENST00000466618 CARD6Q9BX69 1037 aa17.53■□□□□ 0.4
SNED1-208ENST00000466618 SRRTQ9BXP5 876 aaKnown RBP17.53■□□□□ 0.4
SNED1-208ENST00000466618 XPO4Q9C0E2 1151 aaKnown RBP17.53■□□□□ 0.4
SNED1-208ENST00000466618 RNF41Q9H4P4 317 aaPredicted RBP17.53■□□□□ 0.4
SNED1-208ENST00000466618 CWC15Q9P013 229 aaKnown RBP17.53■□□□□ 0.4
SNED1-208ENST00000466618 SWAP70Q9UH65 585 aa17.53■□□□□ 0.4
SNED1-208ENST00000466618 RRP15Q9Y3B9 282 aaKnown RBP17.53■□□□□ 0.4
SNED1-208ENST00000466618 SIPA1L1O43166 1804 aa17.53■□□□□ 0.4
SNED1-208ENST00000466618 LAMA4Q16363 1823 aa17.53■□□□□ 0.4
SNED1-208ENST00000466618 NEDD4P46934 1319 aa17.53■□□□□ 0.4
SNED1-208ENST00000466618 SSC5DA1L4H1 1573 aa17.53■□□□□ 0.4
SNED1-208ENST00000466618 SLC3A2P08195 630 aaKnown RBP17.53■□□□□ 0.4
SNED1-208ENST00000466618 SFPQP23246 707 aaKnown RBP eCLIP17.53■□□□□ 0.4
SNED1-208ENST00000466618 KRT32Q14532 448 aa17.53■□□□□ 0.4
SNED1-208ENST00000466618 BLOC1S2Q6QNY1 142 aa17.53■□□□□ 0.4
SNED1-208ENST00000466618 MFSD6Q6ZSS7 791 aa17.53■□□□□ 0.4
SNED1-208ENST00000466618 CCDC34Q96HJ3 373 aa17.53■□□□□ 0.4
SNED1-208ENST00000466618 CFAP45Q9UL16 551 aa17.53■□□□□ 0.4
SNED1-208ENST00000466618 LAMB1P07942 1786 aa17.53■□□□□ 0.4
SNED1-208ENST00000466618 MYH1P12882 1939 aa17.52■□□□□ 0.4
SNED1-208ENST00000466618 CHRM1P11229 460 aaPredicted RBP17.52■□□□□ 0.4
SNED1-208ENST00000466618 SHMT1P34896 483 aa17.52■□□□□ 0.4
SNED1-208ENST00000466618 PDE4BQ07343 736 aa17.52■□□□□ 0.4
SNED1-208ENST00000466618 HOMER1Q86YM7 354 aa17.52■□□□□ 0.4
SNED1-208ENST00000466618 TEX2Q8IWB9 1127 aa17.52■□□□□ 0.4
SNED1-208ENST00000466618 STK11IPQ8N1F8 1099 aa17.52■□□□□ 0.4
SNED1-208ENST00000466618 ERCC4Q92889 916 aaPredicted RBP17.52■□□□□ 0.4
SNED1-208ENST00000466618 EXOC4Q96A65 974 aa17.52■□□□□ 0.4
SNED1-208ENST00000466618 FTOQ9C0B1 505 aaKnown RBP eCLIP17.52■□□□□ 0.4
SNED1-208ENST00000466618 GEMIN8Q9NWZ8 242 aaKnown RBP17.52■□□□□ 0.4
SNED1-208ENST00000466618 TPM1P09493 284 aa17.52■□□□□ 0.39
SNED1-208ENST00000466618 RASA1P20936 1047 aa17.52■□□□□ 0.39
SNED1-208ENST00000466618 EVCP57679 992 aa17.52■□□□□ 0.39
SNED1-208ENST00000466618 CEBPZQ03701 1054 aaKnown RBP17.52■□□□□ 0.39
SNED1-208ENST00000466618 ZSCAN16Q9H4T2 348 aaPredicted RBP17.52■□□□□ 0.39
SNED1-208ENST00000466618 FAM196BA6NMK8 535 aa17.51■□□□□ 0.39
SNED1-208ENST00000466618 PRDM1O75626 825 aa17.51■□□□□ 0.39
SNED1-208ENST00000466618 SUPT20HL1Q3ZLR7 823 aa17.51■□□□□ 0.39
SNED1-208ENST00000466618 CHADLQ6NUI6 762 aa17.51■□□□□ 0.39
SNED1-208ENST00000466618 CDCA5Q96FF9 252 aa17.51■□□□□ 0.39
SNED1-208ENST00000466618 CNNM2Q9H8M5 875 aa17.51■□□□□ 0.39
SNED1-208ENST00000466618 IFNKQ9P0W0 207 aa17.51■□□□□ 0.39
SNED1-208ENST00000466618 RCOR1Q9UKL0 485 aa17.51■□□□□ 0.39
SNED1-208ENST00000466618 NT5C2P49902 561 aa17.5■□□□□ 0.39
SNED1-208ENST00000466618 ICE2Q659A1 982 aa17.5■□□□□ 0.39
SNED1-208ENST00000466618 MIGA2Q7L4E1 593 aa17.5■□□□□ 0.39
SNED1-208ENST00000466618 CRACR2BQ8N4Y2 399 aaPredicted RBP17.5■□□□□ 0.39
SNED1-208ENST00000466618 ZNF784Q8NCA9 323 aaPredicted RBP17.5■□□□□ 0.39
SNED1-208ENST00000466618 HOOK2Q96ED9 719 aa17.5■□□□□ 0.39
SNED1-208ENST00000466618 NEK1Q96PY6 1258 aa17.5■□□□□ 0.39
SNED1-208ENST00000466618 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.5■□□□□ 0.39
SNED1-208ENST00000466618 ZNF287Q9HBT7 754 aa17.5■□□□□ 0.39
SNED1-208ENST00000466618 ADAM21Q9UKJ8 722 aa17.5■□□□□ 0.39
SNED1-208ENST00000466618 PHF20L1A8MW92 1017 aa17.5■□□□□ 0.39
SNED1-208ENST00000466618 KINO60870 393 aaKnown RBP17.5■□□□□ 0.39
SNED1-208ENST00000466618 URI1O94763 535 aaPredicted RBP17.5■□□□□ 0.39
SNED1-208ENST00000466618 SMC2O95347 1197 aa17.5■□□□□ 0.39
SNED1-208ENST00000466618 ITGBL1O95965 494 aaPredicted RBP17.5■□□□□ 0.39
SNED1-208ENST00000466618 MB21D2Q8IYB1 491 aaPredicted RBP17.5■□□□□ 0.39
SNED1-208ENST00000466618 NCOA7Q8NI08 942 aa17.5■□□□□ 0.39
SNED1-208ENST00000466618 FUT8Q9BYC5 575 aa17.5■□□□□ 0.39
SNED1-208ENST00000466618 KRT23Q9C075 422 aa17.5■□□□□ 0.39
SNED1-208ENST00000466618 H3BQF6 201 aa17.49■□□□□ 0.39
SNED1-208ENST00000466618 GTF2A1P52655 376 aaPredicted RBP17.49■□□□□ 0.39
SNED1-208ENST00000466618 FAM160A1Q05DH4 1040 aa17.49■□□□□ 0.39
SNED1-208ENST00000466618 RRP1BQ14684 758 aaKnown RBP17.49■□□□□ 0.39
SNED1-208ENST00000466618 CCDC73Q6ZRK6 1079 aa17.49■□□□□ 0.39
SNED1-208ENST00000466618 NAT10Q9H0A0 1025 aaKnown RBP17.49■□□□□ 0.39
SNED1-208ENST00000466618 MKNK2Q9HBH9 465 aa17.49■□□□□ 0.39
SNED1-208ENST00000466618 ZNF112Q9UJU3 913 aa17.49■□□□□ 0.39
SNED1-208ENST00000466618 B4E1Z4 1266 aa17.49■□□□□ 0.39
SNED1-208ENST00000466618 TRAF5O00463 557 aa17.49■□□□□ 0.39
SNED1-208ENST00000466618 ACTN2P35609 894 aa17.49■□□□□ 0.39
SNED1-208ENST00000466618 LMAN1P49257 510 aa17.49■□□□□ 0.39
SNED1-208ENST00000466618 ZSWIM5Q9P217 1185 aa17.49■□□□□ 0.39
SNED1-208ENST00000466618 EXOSC10Q01780 885 aaKnown RBP17.48■□□□□ 0.39
SNED1-208ENST00000466618 TRDNQ13061 729 aa17.48■□□□□ 0.39
SNED1-208ENST00000466618 DCAF15Q66K64 600 aa17.48■□□□□ 0.39
SNED1-208ENST00000466618 GPR161Q8N6U8 529 aaKnown RBP17.48■□□□□ 0.39
SNED1-208ENST00000466618 ESR2Q92731 530 aa17.48■□□□□ 0.39
SNED1-208ENST00000466618 H3BQV1 296 aa17.47■□□□□ 0.39
SNED1-208ENST00000466618 CCP110O43303 1012 aa17.47■□□□□ 0.39
SNED1-208ENST00000466618 HMGB1P09429 215 aaKnown RBP17.47■□□□□ 0.39
SNED1-208ENST00000466618 FMR1Q06787 632 aaKnown RBP eCLIP17.47■□□□□ 0.39
SNED1-208ENST00000466618 IFFO2Q5TF58 517 aa17.47■□□□□ 0.39
SNED1-208ENST00000466618 CYB5R4Q7L1T6 521 aa17.47■□□□□ 0.39
SNED1-208ENST00000466618 CHMP4CQ96CF2 233 aa17.47■□□□□ 0.39
SNED1-208ENST00000466618 BPIFA3Q9BQP9 254 aa17.47■□□□□ 0.39
SNED1-208ENST00000466618 USP2O75604 605 aaPredicted RBP17.47■□□□□ 0.39
SNED1-208ENST00000466618 ANTXR2P58335 489 aa17.47■□□□□ 0.39
SNED1-208ENST00000466618 JAG1P78504 1218 aa17.47■□□□□ 0.39
SNED1-208ENST00000466618 DPCR1Q3MIW9 517 aa17.47■□□□□ 0.39
SNED1-208ENST00000466618 RRP12Q5JTH9 1297 aaKnown RBP17.47■□□□□ 0.39
SNED1-208ENST00000466618 RSRC2Q7L4I2 434 aaKnown RBP17.47■□□□□ 0.39
SNED1-208ENST00000466618 RALYLQ86SE5 291 aaKnown RBP17.47■□□□□ 0.39
SNED1-208ENST00000466618 ZNF444Q8N0Y2 327 aaPredicted RBP17.47■□□□□ 0.39
SNED1-208ENST00000466618 CCDC17Q96LX7 622 aa17.47■□□□□ 0.39
SNED1-208ENST00000466618 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.47■□□□□ 0.39
SNED1-208ENST00000466618 ZNF341Q9BYN7 854 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms