RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 TEX13BQ9BXU2 312 aa17.29■□□□□ 0.36
ALMS1-202ENST00000464408 ATP11BQ9Y2G3 1177 aa17.29■□□□□ 0.36
ALMS1-202ENST00000464408 KBTBD13C9JR72 458 aa17.28■□□□□ 0.36
ALMS1-202ENST00000464408 ZNF865P0CJ78 1059 aaPredicted RBP17.28■□□□□ 0.36
ALMS1-202ENST00000464408 CTDSPL2Q05D32 466 aa17.28■□□□□ 0.36
ALMS1-202ENST00000464408 ANKRD45Q5TZF3 282 aa17.28■□□□□ 0.36
ALMS1-202ENST00000464408 VPS53Q5VIR6 699 aa17.28■□□□□ 0.36
ALMS1-202ENST00000464408 RASGRP2Q7LDG7 609 aa17.28■□□□□ 0.36
ALMS1-202ENST00000464408 NEDD1Q8NHV4 660 aa17.28■□□□□ 0.36
ALMS1-202ENST00000464408 MKL1Q969V6 931 aa17.28■□□□□ 0.36
ALMS1-202ENST00000464408 NAPBQ9H115 298 aa17.28■□□□□ 0.36
ALMS1-202ENST00000464408 RAVER2Q9HCJ3 691 aaKnown RBP17.28■□□□□ 0.36
ALMS1-202ENST00000464408 TTLL1O95922 423 aa17.27■□□□□ 0.36
ALMS1-202ENST00000464408 PGK1P00558 417 aa17.27■□□□□ 0.36
ALMS1-202ENST00000464408 TSPY3P0CV98 308 aa17.27■□□□□ 0.36
ALMS1-202ENST00000464408 TSPY8P0CW00 308 aa17.27■□□□□ 0.36
ALMS1-202ENST00000464408 TFAP4Q01664 338 aa17.27■□□□□ 0.36
ALMS1-202ENST00000464408 LRRFIP1Q32MZ4 808 aaKnown RBP17.27■□□□□ 0.36
ALMS1-202ENST00000464408 LRIT3Q3SXY7 679 aa17.27■□□□□ 0.36
ALMS1-202ENST00000464408 TRIM60Q495X7 471 aa17.27■□□□□ 0.36
ALMS1-202ENST00000464408 SLC39A5Q6ZMH5 540 aa17.27■□□□□ 0.36
ALMS1-202ENST00000464408 PRPF38AQ8NAV1 312 aaKnown RBP17.27■□□□□ 0.36
ALMS1-202ENST00000464408 NACAP1Q9BZK3 213 aa17.27■□□□□ 0.36
ALMS1-202ENST00000464408 NMT2O60551 498 aa17.26■□□□□ 0.35
ALMS1-202ENST00000464408 SNAI1O95863 264 aaPredicted RBP17.26■□□□□ 0.35
ALMS1-202ENST00000464408 COPB2P35606 906 aa17.26■□□□□ 0.35
ALMS1-202ENST00000464408 PDE4BQ07343 736 aa17.26■□□□□ 0.35
ALMS1-202ENST00000464408 SLFN13Q68D06 897 aa17.26■□□□□ 0.35
ALMS1-202ENST00000464408 GMCL1P1Q8NEA9 526 aa17.26■□□□□ 0.35
ALMS1-202ENST00000464408 FGD4Q96M96 766 aa17.26■□□□□ 0.35
ALMS1-202ENST00000464408 SLC38A10Q9HBR0 1119 aa17.26■□□□□ 0.35
ALMS1-202ENST00000464408 ZNF287Q9HBT7 754 aa17.26■□□□□ 0.35
ALMS1-202ENST00000464408 XPNPEP3Q9NQH7 507 aa17.26■□□□□ 0.35
ALMS1-202ENST00000464408 DIS3Q9Y2L1 958 aaKnown RBP17.26■□□□□ 0.35
ALMS1-202ENST00000464408 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
ALMS1-202ENST00000464408 DNAJC25-GNG10A0A024R161 153 aa17.25■□□□□ 0.35
ALMS1-202ENST00000464408 ATP2A1O14983 1001 aa17.25■□□□□ 0.35
ALMS1-202ENST00000464408 ZBED4O75132 1171 aa17.25■□□□□ 0.35
ALMS1-202ENST00000464408 RARBP10826 455 aa17.25■□□□□ 0.35
ALMS1-202ENST00000464408 SNX17Q15036 470 aa17.25■□□□□ 0.35
ALMS1-202ENST00000464408 SH3RF1Q7Z6J0 888 aa17.25■□□□□ 0.35
ALMS1-202ENST00000464408 PRDM5Q9NQX1 630 aaPredicted RBP17.25■□□□□ 0.35
ALMS1-202ENST00000464408 NRBP1Q9UHY1 535 aa17.25■□□□□ 0.35
ALMS1-202ENST00000464408 TMEM232C9JQI7 657 aa17.24■□□□□ 0.35
ALMS1-202ENST00000464408 BMP3P12645 472 aa17.24■□□□□ 0.35
ALMS1-202ENST00000464408 PDE1AP54750 535 aa17.24■□□□□ 0.35
ALMS1-202ENST00000464408 IRX5P78411 483 aaPredicted RBP17.24■□□□□ 0.35
ALMS1-202ENST00000464408 DEFB123Q8N688 67 aa17.24■□□□□ 0.35
ALMS1-202ENST00000464408 DDX11Q96FC9 970 aa17.24■□□□□ 0.35
ALMS1-202ENST00000464408 FAM227BQ96M60 508 aa17.24■□□□□ 0.35
ALMS1-202ENST00000464408 PDLIM7Q9NR12 457 aa17.24■□□□□ 0.35
ALMS1-202ENST00000464408 IL17RBQ9NRM6 502 aa17.24■□□□□ 0.35
ALMS1-202ENST00000464408 HOMER2Q9NSB8 354 aa17.24■□□□□ 0.35
ALMS1-202ENST00000464408 FEM1BQ9UK73 627 aa17.24■□□□□ 0.35
ALMS1-202ENST00000464408 ISY1Q9ULR0 285 aaKnown RBP17.24■□□□□ 0.35
ALMS1-202ENST00000464408 PHF24Q9UPV7 400 aa17.24■□□□□ 0.35
ALMS1-202ENST00000464408 LCTP09848 1927 aa17.23■□□□□ 0.35
ALMS1-202ENST00000464408 A0A0D9SFI3 127 aa17.23■□□□□ 0.35
ALMS1-202ENST00000464408 TRIM43BA6NCK2 446 aa17.23■□□□□ 0.35
ALMS1-202ENST00000464408 MYADML2A6NDP7 307 aa17.23■□□□□ 0.35
ALMS1-202ENST00000464408 ADCY6O43306 1168 aa17.23■□□□□ 0.35
ALMS1-202ENST00000464408 ADAMTS4O75173 837 aa17.23■□□□□ 0.35
ALMS1-202ENST00000464408 SLC3A2P08195 630 aaKnown RBP17.23■□□□□ 0.35
ALMS1-202ENST00000464408 AKR1A1P14550 325 aa17.23■□□□□ 0.35
ALMS1-202ENST00000464408 SNAP25P60880 206 aa17.23■□□□□ 0.35
ALMS1-202ENST00000464408 HDAC1Q13547 482 aaPredicted RBP17.23■□□□□ 0.35
ALMS1-202ENST00000464408 TRIM43Q96BQ3 446 aaPredicted RBP17.23■□□□□ 0.35
ALMS1-202ENST00000464408 EVI5LQ96CN4 794 aa17.23■□□□□ 0.35
ALMS1-202ENST00000464408 YTHDC1Q96MU7 727 aaKnown RBP17.23■□□□□ 0.35
ALMS1-202ENST00000464408 LBHD1Q9BQE6 289 aaPredicted RBP17.23■□□□□ 0.35
ALMS1-202ENST00000464408 CTDP1Q9Y5B0 961 aaPredicted RBP17.23■□□□□ 0.35
ALMS1-202ENST00000464408 ZNF536O15090 1300 aa17.22■□□□□ 0.35
ALMS1-202ENST00000464408 SYNRGQ9UMZ2 1314 aa17.22■□□□□ 0.35
ALMS1-202ENST00000464408 MCCP23508 829 aa17.22■□□□□ 0.35
ALMS1-202ENST00000464408 MAMDC4Q6UXC1 1216 aa17.22■□□□□ 0.35
ALMS1-202ENST00000464408 KCTD1Q719H9 257 aa17.22■□□□□ 0.35
ALMS1-202ENST00000464408 AGBL1Q96MI9 1066 aa17.22■□□□□ 0.35
ALMS1-202ENST00000464408 PRKAG2Q9UGJ0 569 aa17.22■□□□□ 0.35
ALMS1-202ENST00000464408 ZHX1Q9UKY1 873 aaPredicted RBP17.22■□□□□ 0.35
ALMS1-202ENST00000464408 SYNPO2Q9UMS6 1093 aa17.22■□□□□ 0.35
ALMS1-202ENST00000464408 STX8Q9UNK0 236 aa17.22■□□□□ 0.35
ALMS1-202ENST00000464408 CNPY2Q9Y2B0 182 aa17.22■□□□□ 0.35
ALMS1-202ENST00000464408 DDX49Q9Y6V7 483 aaKnown RBP17.22■□□□□ 0.35
ALMS1-202ENST00000464408 SYNGAP1Q96PV0 1343 aa17.21■□□□□ 0.35
ALMS1-202ENST00000464408 LRRC37A2A6NM11 1700 aa17.21■□□□□ 0.35
ALMS1-202ENST00000464408 A0A1W2PQ45 241 aaPredicted RBP17.21■□□□□ 0.35
ALMS1-202ENST00000464408 A0A1W2PQY0 241 aa17.21■□□□□ 0.35
ALMS1-202ENST00000464408 ITGB8P26012 769 aa17.21■□□□□ 0.35
ALMS1-202ENST00000464408 CNTN2Q02246 1040 aa17.21■□□□□ 0.35
ALMS1-202ENST00000464408 TLE2Q04725 743 aa17.21■□□□□ 0.35
ALMS1-202ENST00000464408 C9orf50Q5SZB4 431 aa17.21■□□□□ 0.35
ALMS1-202ENST00000464408 GPR153Q6NV75 609 aa17.21■□□□□ 0.35
ALMS1-202ENST00000464408 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.21■□□□□ 0.35
ALMS1-202ENST00000464408 RNF180Q86T96 592 aa17.21■□□□□ 0.35
ALMS1-202ENST00000464408 ZNF589Q86UQ0 364 aaPredicted RBP17.21■□□□□ 0.35
ALMS1-202ENST00000464408 ANKRD35Q8N283 1001 aa17.21■□□□□ 0.35
ALMS1-202ENST00000464408 BADQ92934 168 aa17.21■□□□□ 0.35
ALMS1-202ENST00000464408 GMCL1Q96IK5 515 aa17.21■□□□□ 0.35
ALMS1-202ENST00000464408 MTMR7Q9Y216 660 aa17.21■□□□□ 0.35
ALMS1-202ENST00000464408 TSPY2A6NKD2 308 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms