RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 PXYLP1Q8TE99 480 aa20.78■□□□□ 0.92
VPS52-214ENST00000463486 CHURC1Q8WUH1 139 aa20.78■□□□□ 0.92
VPS52-214ENST00000463486 RIPK3Q9Y572 518 aa20.78■□□□□ 0.92
VPS52-214ENST00000463486 ZNF536O15090 1300 aa20.78■□□□□ 0.92
VPS52-214ENST00000463486 CCDC85CA6NKD9 419 aa20.77■□□□□ 0.92
VPS52-214ENST00000463486 ADCY3O60266 1144 aa20.77■□□□□ 0.92
VPS52-214ENST00000463486 IGHA2P01877 340 aa20.77■□□□□ 0.92
VPS52-214ENST00000463486 ELNP15502 786 aa20.77■□□□□ 0.92
VPS52-214ENST00000463486 GRK4P32298 578 aa20.77■□□□□ 0.92
VPS52-214ENST00000463486 GRB14Q14449 540 aa20.77■□□□□ 0.92
VPS52-214ENST00000463486 SLC9C1Q4G0N8 1177 aa20.77■□□□□ 0.92
VPS52-214ENST00000463486 UBAC1Q9BSL1 405 aa20.77■□□□□ 0.92
VPS52-214ENST00000463486 MROH8Q9H579 483 aa20.77■□□□□ 0.92
VPS52-214ENST00000463486 PRR12Q9ULL5 1215 aa20.77■□□□□ 0.92
VPS52-214ENST00000463486 MTMR7Q9Y216 660 aa20.77■□□□□ 0.92
VPS52-214ENST00000463486 SLC15A5A6NIM6 579 aa20.76■□□□□ 0.91
VPS52-214ENST00000463486 XRCC5P13010 732 aaKnown RBP20.76■□□□□ 0.91
VPS52-214ENST00000463486 PLS1Q14651 629 aa20.76■□□□□ 0.91
VPS52-214ENST00000463486 RALYLQ86SE5 291 aaKnown RBP20.76■□□□□ 0.91
VPS52-214ENST00000463486 GPHNQ9NQX3 736 aaPredicted RBP20.76■□□□□ 0.91
VPS52-214ENST00000463486 FRMPD2Q68DX3 1309 aaPredicted RBP20.76■□□□□ 0.91
VPS52-214ENST00000463486 ZBED4O75132 1171 aa20.75■□□□□ 0.91
VPS52-214ENST00000463486 SLC25A27O95847 323 aa20.75■□□□□ 0.91
VPS52-214ENST00000463486 HOXC6P09630 235 aa20.75■□□□□ 0.91
VPS52-214ENST00000463486 FDX1P10109 184 aa20.75■□□□□ 0.91
VPS52-214ENST00000463486 SLC16A2P36021 539 aa20.75■□□□□ 0.91
VPS52-214ENST00000463486 OAZ1P54368 228 aa20.75■□□□□ 0.91
VPS52-214ENST00000463486 MAP2K5Q13163 448 aa20.75■□□□□ 0.91
VPS52-214ENST00000463486 SLAIN1Q8ND83 568 aa20.75■□□□□ 0.91
VPS52-214ENST00000463486 SOCS4Q8WXH5 440 aa20.75■□□□□ 0.91
VPS52-214ENST00000463486 NUDT12Q9BQG2 462 aa20.75■□□□□ 0.91
VPS52-214ENST00000463486 TEX13BQ9BXU2 312 aa20.75■□□□□ 0.91
VPS52-214ENST00000463486 KAT14Q9H8E8 782 aa20.75■□□□□ 0.91
VPS52-214ENST00000463486 RAVER2Q9HCJ3 691 aaKnown RBP20.75■□□□□ 0.91
VPS52-214ENST00000463486 GPCPD1Q9NPB8 672 aa20.75■□□□□ 0.91
VPS52-214ENST00000463486 KIAA0100Q14667 2235 aaKnown RBP20.75■□□□□ 0.91
VPS52-214ENST00000463486 IFIT3O14879 490 aaKnown RBP20.74■□□□□ 0.91
VPS52-214ENST00000463486 STRNO43815 780 aa20.74■□□□□ 0.91
VPS52-214ENST00000463486 CAPN15O75808 1086 aa20.74■□□□□ 0.91
VPS52-214ENST00000463486 CYP2B6P20813 491 aa20.74■□□□□ 0.91
VPS52-214ENST00000463486 HSPA4P34932 840 aa20.74■□□□□ 0.91
VPS52-214ENST00000463486 CCDC96Q2M329 555 aa20.74■□□□□ 0.91
VPS52-214ENST00000463486 ADCK5Q3MIX3 580 aa20.74■□□□□ 0.91
VPS52-214ENST00000463486 IFIT1BQ5T764 474 aaKnown RBP20.74■□□□□ 0.91
VPS52-214ENST00000463486 NCAPG2Q86XI2 1143 aa20.74■□□□□ 0.91
VPS52-214ENST00000463486 CCAR1Q8IX12 1150 aaKnown RBP20.74■□□□□ 0.91
VPS52-214ENST00000463486 ABRAQ8N0Z2 381 aa20.74■□□□□ 0.91
VPS52-214ENST00000463486 COBLO75128 1261 aa20.73■□□□□ 0.91
VPS52-214ENST00000463486 GOLGA8HP0CJ92 632 aa20.73■□□□□ 0.91
VPS52-214ENST00000463486 SNAP25P60880 206 aa20.73■□□□□ 0.91
VPS52-214ENST00000463486 MTFR1Q15390 333 aa20.73■□□□□ 0.91
VPS52-214ENST00000463486 CCL14Q16627 93 aa20.73■□□□□ 0.91
VPS52-214ENST00000463486 SNRNP48Q6IEG0 339 aaKnown RBP20.73■□□□□ 0.91
VPS52-214ENST00000463486 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.73■□□□□ 0.91
VPS52-214ENST00000463486 NBPF11Q86T75 865 aa20.73■□□□□ 0.91
VPS52-214ENST00000463486 CPXCR1Q8N123 301 aa20.73■□□□□ 0.91
VPS52-214ENST00000463486 TRIB2Q92519 343 aa20.73■□□□□ 0.91
VPS52-214ENST00000463486 MTA3Q9BTC8 594 aa20.73■□□□□ 0.91
VPS52-214ENST00000463486 RANBP17Q9H2T7 1088 aaKnown RBP20.73■□□□□ 0.91
VPS52-214ENST00000463486 LY9Q9HBG7 655 aa20.73■□□□□ 0.91
VPS52-214ENST00000463486 ZNF236Q9UL36 1845 aa20.72■□□□□ 0.91
VPS52-214ENST00000463486 EPB41L2O43491 1005 aaKnown RBP20.72■□□□□ 0.91
VPS52-214ENST00000463486 PRC1O43663 620 aa20.72■□□□□ 0.91
VPS52-214ENST00000463486 ADORA2AP29274 412 aa20.72■□□□□ 0.91
VPS52-214ENST00000463486 MCM5P33992 734 aa20.72■□□□□ 0.91
VPS52-214ENST00000463486 RGS2P41220 211 aa20.72■□□□□ 0.91
VPS52-214ENST00000463486 EXOSC10Q01780 885 aaKnown RBP20.72■□□□□ 0.91
VPS52-214ENST00000463486 TROAPQ12815 778 aa20.72■□□□□ 0.91
VPS52-214ENST00000463486 TRIM32Q13049 653 aa20.72■□□□□ 0.91
VPS52-214ENST00000463486 GPATCH4Q5T3I0 446 aaKnown RBP20.72■□□□□ 0.91
VPS52-214ENST00000463486 SYDE2Q5VT97 1194 aa20.72■□□□□ 0.91
VPS52-214ENST00000463486 WDR78Q5VTH9 848 aa20.72■□□□□ 0.91
VPS52-214ENST00000463486 RNF20Q5VTR2 975 aa20.72■□□□□ 0.91
VPS52-214ENST00000463486 NPLOC4Q8TAT6 608 aa20.72■□□□□ 0.91
VPS52-214ENST00000463486 AGBL1Q96MI9 1066 aa20.72■□□□□ 0.91
VPS52-214ENST00000463486 USP26Q9BXU7 913 aa20.72■□□□□ 0.91
VPS52-214ENST00000463486 CPVLQ9H3G5 476 aa20.72■□□□□ 0.91
VPS52-214ENST00000463486 FLRT1Q9NZU1 646 aa20.72■□□□□ 0.91
VPS52-214ENST00000463486 SH2B2O14492 632 aaPredicted RBP20.71■□□□□ 0.91
VPS52-214ENST00000463486 REC8O95072 547 aa20.71■□□□□ 0.91
VPS52-214ENST00000463486 INHAP05111 366 aa20.71■□□□□ 0.91
VPS52-214ENST00000463486 COPB2P35606 906 aa20.71■□□□□ 0.91
VPS52-214ENST00000463486 SLC35G1Q2M3R5 365 aa20.71■□□□□ 0.91
VPS52-214ENST00000463486 TMEM67Q5HYA8 995 aa20.71■□□□□ 0.91
VPS52-214ENST00000463486 STAG2Q8N3U4 1231 aa20.71■□□□□ 0.91
VPS52-214ENST00000463486 APBA2Q99767 749 aa20.71■□□□□ 0.91
VPS52-214ENST00000463486 MAD2L2Q9UI95 211 aa20.71■□□□□ 0.91
VPS52-214ENST00000463486 ISY1Q9ULR0 285 aaKnown RBP20.71■□□□□ 0.91
VPS52-214ENST00000463486 SNX14Q9Y5W7 946 aa20.71■□□□□ 0.91
VPS52-214ENST00000463486 IVNS1ABPQ9Y6Y0 642 aa20.71■□□□□ 0.91
VPS52-214ENST00000463486 PALM3A6NDB9 673 aaPredicted RBP20.7■□□□□ 0.9
VPS52-214ENST00000463486 SOX10P56693 466 aa20.7■□□□□ 0.9
VPS52-214ENST00000463486 IKQ13123 557 aaPredicted RBP20.7■□□□□ 0.9
VPS52-214ENST00000463486 WTAPQ15007 396 aa20.7■□□□□ 0.9
VPS52-214ENST00000463486 MAP3K21Q5TCX8 1036 aa20.7■□□□□ 0.9
VPS52-214ENST00000463486 NEK1Q96PY6 1258 aa20.7■□□□□ 0.9
VPS52-214ENST00000463486 UBA5Q9GZZ9 404 aa20.7■□□□□ 0.9
VPS52-214ENST00000463486 SMCHD1A6NHR9 2005 aa20.7■□□□□ 0.9
VPS52-214ENST00000463486 POTEFA5A3E0 1075 aa20.69■□□□□ 0.9
VPS52-214ENST00000463486 HMGCRP04035 888 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms