RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 FERMT2Q96AC1 680 aa14.62□□□□□ -0.07
VAPB-203ENST00000463370 DHX58Q96C10 678 aa14.62□□□□□ -0.07
VAPB-203ENST00000463370 NAT10Q9H0A0 1025 aaKnown RBP14.62□□□□□ -0.07
VAPB-203ENST00000463370 PI4KBQ9UBF8 816 aa14.62□□□□□ -0.07
VAPB-203ENST00000463370 SRCAPQ6ZRS2 3230 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 CCDC194A0A1B0GVG4 234 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 SMCO2A6NFE2 343 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 BMP15O95972 392 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 CASP1P29466 404 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 SLC16A2P36021 539 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 ZNF543Q08ER8 600 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 SARM1Q6SZW1 724 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 KCTD1Q719H9 257 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 LARGE2Q8N3Y3 721 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 FBXO41Q8TF61 875 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 COA7Q96BR5 231 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 TMEM60Q9H2L4 133 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 DHX36Q9H2U1 1008 aaKnown RBP14.61□□□□□ -0.07
VAPB-203ENST00000463370 SEC63Q9UGP8 760 aaKnown RBP14.61□□□□□ -0.07
VAPB-203ENST00000463370 SIPA1L1O43166 1804 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 GDF11O95390 407 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 CDC25AP30304 524 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 RRP1BQ14684 758 aaKnown RBP14.61□□□□□ -0.07
VAPB-203ENST00000463370 ASPRV1Q53RT3 343 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 RSBN1LQ6PCB5 846 aaPredicted RBP14.61□□□□□ -0.07
VAPB-203ENST00000463370 SIAH1Q8IUQ4 282 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 RTKN2Q8IZC4 609 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 C17orf53Q8N3J3 647 aaPredicted RBP14.61□□□□□ -0.07
VAPB-203ENST00000463370 PSMD1Q99460 953 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 BPIFA3Q9BQP9 254 aa14.61□□□□□ -0.07
VAPB-203ENST00000463370 CLRN2A0PK11 232 aa14.6□□□□□ -0.07
VAPB-203ENST00000463370 PPP1R11O60927 126 aaPredicted RBP14.6□□□□□ -0.07
VAPB-203ENST00000463370 EEF2P13639 858 aaKnown RBP14.6□□□□□ -0.07
VAPB-203ENST00000463370 PTGS1P23219 599 aa14.6□□□□□ -0.07
VAPB-203ENST00000463370 SMARCA1P28370 1054 aa14.6□□□□□ -0.07
VAPB-203ENST00000463370 CERKLQ49MI3 558 aaPredicted RBP14.6□□□□□ -0.07
VAPB-203ENST00000463370 HSD3B7Q9H2F3 369 aa14.6□□□□□ -0.07
VAPB-203ENST00000463370 JMJD4Q9H9V9 463 aa14.6□□□□□ -0.07
VAPB-203ENST00000463370 MAN1B1Q9UKM7 699 aa14.6□□□□□ -0.07
VAPB-203ENST00000463370 ATF5Q9Y2D1 282 aaPredicted RBP14.6□□□□□ -0.07
VAPB-203ENST00000463370 ZNF500O60304 480 aaPredicted RBP14.6□□□□□ -0.07
VAPB-203ENST00000463370 SEPT2Q15019 361 aa14.6□□□□□ -0.07
VAPB-203ENST00000463370 GALNT17Q6IS24 598 aa14.6□□□□□ -0.07
VAPB-203ENST00000463370 TATDN1Q6P1N9 297 aa14.6□□□□□ -0.07
VAPB-203ENST00000463370 ELOA2Q8IYF1 753 aaPredicted RBP14.6□□□□□ -0.07
VAPB-203ENST00000463370 ADGRF4Q8IZF3 695 aa14.6□□□□□ -0.07
VAPB-203ENST00000463370 GMLQ99445 158 aa14.6□□□□□ -0.07
VAPB-203ENST00000463370 TMEM260Q9NX78 707 aa14.6□□□□□ -0.07
VAPB-203ENST00000463370 RAD21O60216 631 aa14.59□□□□□ -0.07
VAPB-203ENST00000463370 AFMP43652 599 aa14.59□□□□□ -0.07
VAPB-203ENST00000463370 SARSP49591 514 aaKnown RBP14.59□□□□□ -0.07
VAPB-203ENST00000463370 CCDC144BQ3MJ40 725 aa14.59□□□□□ -0.07
VAPB-203ENST00000463370 SLC16A10Q8TF71 515 aa14.59□□□□□ -0.07
VAPB-203ENST00000463370 CCDC17Q96LX7 622 aa14.59□□□□□ -0.07
VAPB-203ENST00000463370 BIN2Q9UBW5 565 aaPredicted RBP14.59□□□□□ -0.07
VAPB-203ENST00000463370 SPDYE2BA6NHP3 402 aa14.59□□□□□ -0.07
VAPB-203ENST00000463370 TCP10L2B9ZVM9 353 aa14.59□□□□□ -0.07
VAPB-203ENST00000463370 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
VAPB-203ENST00000463370 VIL1P09327 827 aaKnown RBP14.59□□□□□ -0.07
VAPB-203ENST00000463370 SPDYE6P0CI01 402 aa14.59□□□□□ -0.07
VAPB-203ENST00000463370 CCDC96Q2M329 555 aa14.59□□□□□ -0.07
VAPB-203ENST00000463370 NT5DC1Q5TFE4 455 aa14.59□□□□□ -0.07
VAPB-203ENST00000463370 CCDC186Q7Z3E2 898 aa14.59□□□□□ -0.07
VAPB-203ENST00000463370 DRC7Q8IY82 874 aa14.59□□□□□ -0.07
VAPB-203ENST00000463370 STAMQ92783 540 aa14.59□□□□□ -0.07
VAPB-203ENST00000463370 PP2D1A8MPX8 630 aa14.58□□□□□ -0.08
VAPB-203ENST00000463370 USP17L10C9JJH3 530 aa14.58□□□□□ -0.08
VAPB-203ENST00000463370 SLFN14P0C7P3 912 aa14.58□□□□□ -0.08
VAPB-203ENST00000463370 E2F4Q16254 413 aa14.58□□□□□ -0.08
VAPB-203ENST00000463370 JAKMIP3Q5VZ66 844 aa14.58□□□□□ -0.08
VAPB-203ENST00000463370 CDAN1Q8IWY9 1227 aa14.58□□□□□ -0.08
VAPB-203ENST00000463370 PAGE5Q96GU1 130 aa14.58□□□□□ -0.08
VAPB-203ENST00000463370 ATRNL1Q5VV63 1379 aa14.58□□□□□ -0.08
VAPB-203ENST00000463370 ATP1A3P13637 1013 aa14.58□□□□□ -0.08
VAPB-203ENST00000463370 SH3RF1Q7Z6J0 888 aa14.58□□□□□ -0.08
VAPB-203ENST00000463370 SPATA20Q8TB22 786 aa14.58□□□□□ -0.08
VAPB-203ENST00000463370 CSRNP1Q96S65 589 aa14.58□□□□□ -0.08
VAPB-203ENST00000463370 C6orf50Q9HD87 102 aa14.58□□□□□ -0.08
VAPB-203ENST00000463370 PYCARDQ9ULZ3 195 aa14.58□□□□□ -0.08
VAPB-203ENST00000463370 GREB1LQ9C091 1923 aaPredicted RBP14.57□□□□□ -0.08
VAPB-203ENST00000463370 LMOD1P29536 600 aaPredicted RBP14.57□□□□□ -0.08
VAPB-203ENST00000463370 LRMPQ12912 555 aa14.57□□□□□ -0.08
VAPB-203ENST00000463370 LETM2Q2VYF4 491 aa14.57□□□□□ -0.08
VAPB-203ENST00000463370 SOGA3Q5TF21 947 aa14.57□□□□□ -0.08
VAPB-203ENST00000463370 CCDC12Q8WUD4 166 aaPredicted RBP14.57□□□□□ -0.08
VAPB-203ENST00000463370 SMARCE1Q969G3 411 aa14.57□□□□□ -0.08
VAPB-203ENST00000463370 MTRQ99707 1265 aa14.57□□□□□ -0.08
VAPB-203ENST00000463370 TRIM34Q9BYJ4 488 aa14.57□□□□□ -0.08
VAPB-203ENST00000463370 EDIL3O43854 480 aa14.56□□□□□ -0.08
VAPB-203ENST00000463370 ENTPD3O75355 529 aa14.56□□□□□ -0.08
VAPB-203ENST00000463370 GNA11P29992 359 aa14.56□□□□□ -0.08
VAPB-203ENST00000463370 FMR1Q06787 632 aaKnown RBP eCLIP14.56□□□□□ -0.08
VAPB-203ENST00000463370 MORC3Q14149 939 aa14.56□□□□□ -0.08
VAPB-203ENST00000463370 ARID5BQ14865 1188 aa14.56□□□□□ -0.08
VAPB-203ENST00000463370 ARL6IP4Q66PJ3 421 aaKnown RBP14.56□□□□□ -0.08
VAPB-203ENST00000463370 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.56□□□□□ -0.08
VAPB-203ENST00000463370 TBCKQ8TEA7 893 aa14.56□□□□□ -0.08
VAPB-203ENST00000463370 MKL1Q969V6 931 aa14.56□□□□□ -0.08
VAPB-203ENST00000463370 MRFAP1L1Q96HT8 127 aa14.56□□□□□ -0.08
VAPB-203ENST00000463370 KANSL2Q9H9L4 492 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms