RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 KIFC2Q96AC6 838 aa15.47■□□□□ 0.07
HDAC1-203ENST00000463172 NUP88Q99567 741 aaPredicted RBP15.47■□□□□ 0.07
HDAC1-203ENST00000463172 NR2E3Q9Y5X4 410 aa15.47■□□□□ 0.07
HDAC1-203ENST00000463172 MKI67P46013 3256 aaKnown RBP15.47■□□□□ 0.07
HDAC1-203ENST00000463172 OAZ1P54368 228 aa15.46■□□□□ 0.07
HDAC1-203ENST00000463172 AKNAD1Q5T1N1 836 aa15.46■□□□□ 0.07
HDAC1-203ENST00000463172 SNRNP48Q6IEG0 339 aaKnown RBP15.46■□□□□ 0.07
HDAC1-203ENST00000463172 STAG1Q8WVM7 1258 aa15.46■□□□□ 0.07
HDAC1-203ENST00000463172 ESR2Q92731 530 aa15.46■□□□□ 0.07
HDAC1-203ENST00000463172 DSCC1Q9BVC3 393 aa15.46■□□□□ 0.07
HDAC1-203ENST00000463172 TCP11L1Q9NUJ3 509 aa15.46■□□□□ 0.07
HDAC1-203ENST00000463172 FBXO40Q9UH90 709 aa15.46■□□□□ 0.07
HDAC1-203ENST00000463172 ZNF214Q9UL59 606 aaPredicted RBP15.46■□□□□ 0.07
HDAC1-203ENST00000463172 RAD50Q92878 1312 aa15.45■□□□□ 0.06
HDAC1-203ENST00000463172 LAMA4Q16363 1823 aa15.45■□□□□ 0.06
HDAC1-203ENST00000463172 TMEM232C9JQI7 657 aa15.45■□□□□ 0.06
HDAC1-203ENST00000463172 ATP2A1O14983 1001 aa15.45■□□□□ 0.06
HDAC1-203ENST00000463172 CNGA1P29973 690 aa15.45■□□□□ 0.06
HDAC1-203ENST00000463172 HAND2P61296 217 aa15.45■□□□□ 0.06
HDAC1-203ENST00000463172 IMMTQ16891 758 aaKnown RBP15.45■□□□□ 0.06
HDAC1-203ENST00000463172 NPLOC4Q8TAT6 608 aa15.45■□□□□ 0.06
HDAC1-203ENST00000463172 DCAF4Q8WV16 495 aa15.45■□□□□ 0.06
HDAC1-203ENST00000463172 DDX11Q96FC9 970 aa15.45■□□□□ 0.06
HDAC1-203ENST00000463172 TTC14Q96N46 770 aa15.45■□□□□ 0.06
HDAC1-203ENST00000463172 NBPF3Q9H094 633 aa15.45■□□□□ 0.06
HDAC1-203ENST00000463172 OGDHLQ9ULD0 1010 aa15.45■□□□□ 0.06
HDAC1-203ENST00000463172 DIS3Q9Y2L1 958 aaKnown RBP15.45■□□□□ 0.06
HDAC1-203ENST00000463172 PLXNA1Q9UIW2 1896 aa15.44■□□□□ 0.06
HDAC1-203ENST00000463172 PLA2G6O60733 806 aa15.44■□□□□ 0.06
HDAC1-203ENST00000463172 TOP1P11387 765 aaKnown RBP15.44■□□□□ 0.06
HDAC1-203ENST00000463172 MCCP23508 829 aa15.44■□□□□ 0.06
HDAC1-203ENST00000463172 SLC4A3P48751 1232 aa15.44■□□□□ 0.06
HDAC1-203ENST00000463172 RCSD1Q6JBY9 416 aa15.44■□□□□ 0.06
HDAC1-203ENST00000463172 UBE2Q1Q7Z7E8 422 aa15.44■□□□□ 0.06
HDAC1-203ENST00000463172 IQCA1Q86XH1 822 aa15.44■□□□□ 0.06
HDAC1-203ENST00000463172 CPXCR1Q8N123 301 aa15.44■□□□□ 0.06
HDAC1-203ENST00000463172 REPS2Q8NFH8 660 aa15.44■□□□□ 0.06
HDAC1-203ENST00000463172 SLC38A10Q9HBR0 1119 aa15.44■□□□□ 0.06
HDAC1-203ENST00000463172 EVI5O60447 810 aa15.43■□□□□ 0.06
HDAC1-203ENST00000463172 PDE4AP27815 886 aa15.43■□□□□ 0.06
HDAC1-203ENST00000463172 CCND3P30281 292 aaPredicted RBP15.43■□□□□ 0.06
HDAC1-203ENST00000463172 CCDC96Q2M329 555 aa15.43■□□□□ 0.06
HDAC1-203ENST00000463172 CHST13Q8NET6 341 aa15.43■□□□□ 0.06
HDAC1-203ENST00000463172 PAWRQ96IZ0 340 aaKnown RBP15.43■□□□□ 0.06
HDAC1-203ENST00000463172 C11orf49Q9H6J7 331 aa15.43■□□□□ 0.06
HDAC1-203ENST00000463172 CNNM2Q9H8M5 875 aa15.43■□□□□ 0.06
HDAC1-203ENST00000463172 INCENPQ9NQS7 918 aa15.43■□□□□ 0.06
HDAC1-203ENST00000463172 IL17RBQ9NRM6 502 aa15.43■□□□□ 0.06
HDAC1-203ENST00000463172 FLRT1Q9NZU1 646 aa15.43■□□□□ 0.06
HDAC1-203ENST00000463172 DDX20Q9UHI6 824 aaKnown RBP15.43■□□□□ 0.06
HDAC1-203ENST00000463172 NRBP1Q9UHY1 535 aa15.43■□□□□ 0.06
HDAC1-203ENST00000463172 NMT2O60551 498 aa15.42■□□□□ 0.06
HDAC1-203ENST00000463172 COBLO75128 1261 aa15.42■□□□□ 0.06
HDAC1-203ENST00000463172 CYP2C19P33261 490 aa15.42■□□□□ 0.06
HDAC1-203ENST00000463172 NOVP48745 357 aa15.42■□□□□ 0.06
HDAC1-203ENST00000463172 TKFCQ3LXA3 575 aa15.42■□□□□ 0.06
HDAC1-203ENST00000463172 ANKRD35Q8N283 1001 aa15.42■□□□□ 0.06
HDAC1-203ENST00000463172 MSL3Q8N5Y2 521 aaKnown RBP15.42■□□□□ 0.06
HDAC1-203ENST00000463172 MAML3Q96JK9 1138 aa15.42■□□□□ 0.06
HDAC1-203ENST00000463172 KRT23Q9C075 422 aa15.42■□□□□ 0.06
HDAC1-203ENST00000463172 PNMA2Q9UL42 364 aa15.42■□□□□ 0.06
HDAC1-203ENST00000463172 MTMR7Q9Y216 660 aa15.42■□□□□ 0.06
HDAC1-203ENST00000463172 RAVER2Q9HCJ3 691 aaKnown RBP15.41■□□□□ 0.06
HDAC1-203ENST00000463172 CNPY2Q9Y2B0 182 aa15.41■□□□□ 0.06
HDAC1-203ENST00000463172 FRMPD3Q5JV73 1810 aa15.4■□□□□ 0.06
HDAC1-203ENST00000463172 SEPT4O43236 478 aa15.4■□□□□ 0.06
HDAC1-203ENST00000463172 CYBAP13498 195 aa15.4■□□□□ 0.06
HDAC1-203ENST00000463172 GSPT1P15170 499 aaKnown RBP15.4■□□□□ 0.06
HDAC1-203ENST00000463172 TRDNQ13061 729 aa15.4■□□□□ 0.06
HDAC1-203ENST00000463172 KCTD1Q719H9 257 aa15.4■□□□□ 0.06
HDAC1-203ENST00000463172 DGKHQ86XP1 1220 aa15.4■□□□□ 0.06
HDAC1-203ENST00000463172 TBC1D10CQ8IV04 446 aa15.4■□□□□ 0.06
HDAC1-203ENST00000463172 ARRDC4Q8NCT1 418 aa15.4■□□□□ 0.06
HDAC1-203ENST00000463172 TMEM47Q9BQJ4 181 aa15.4■□□□□ 0.06
HDAC1-203ENST00000463172 TINF2Q9BSI4 451 aa15.4■□□□□ 0.06
HDAC1-203ENST00000463172 ACAD9Q9H845 621 aa15.4■□□□□ 0.06
HDAC1-203ENST00000463172 H0YGN5 161 aa15.39■□□□□ 0.05
HDAC1-203ENST00000463172 PGK2P07205 417 aa15.39■□□□□ 0.05
HDAC1-203ENST00000463172 ZNF792Q3KQV3 632 aa15.39■□□□□ 0.05
HDAC1-203ENST00000463172 LHX8Q68G74 356 aa15.39■□□□□ 0.05
HDAC1-203ENST00000463172 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.39■□□□□ 0.05
HDAC1-203ENST00000463172 CENPQQ7L2Z9 268 aaPredicted RBP15.39■□□□□ 0.05
HDAC1-203ENST00000463172 DIS3LQ8TF46 1054 aaKnown RBP15.39■□□□□ 0.05
HDAC1-203ENST00000463172 CHMP4CQ96CF2 233 aa15.39■□□□□ 0.05
HDAC1-203ENST00000463172 UBAC1Q9BSL1 405 aa15.39■□□□□ 0.05
HDAC1-203ENST00000463172 KAT14Q9H8E8 782 aa15.39■□□□□ 0.05
HDAC1-203ENST00000463172 PRR12Q9ULL5 1215 aa15.39■□□□□ 0.05
HDAC1-203ENST00000463172 TACC3Q9Y6A5 838 aa15.39■□□□□ 0.05
HDAC1-203ENST00000463172 U3KPZ7 1027 aaPredicted RBP15.39■□□□□ 0.05
HDAC1-203ENST00000463172 KBTBD13C9JR72 458 aa15.38■□□□□ 0.05
HDAC1-203ENST00000463172 KDM4AO75164 1064 aa15.38■□□□□ 0.05
HDAC1-203ENST00000463172 CHMLP26374 656 aa15.38■□□□□ 0.05
HDAC1-203ENST00000463172 GPATCH4Q5T3I0 446 aaKnown RBP15.38■□□□□ 0.05
HDAC1-203ENST00000463172 ZNF467Q7Z7K2 595 aaPredicted RBP15.38■□□□□ 0.05
HDAC1-203ENST00000463172 HOMER2Q9NSB8 354 aa15.38■□□□□ 0.05
HDAC1-203ENST00000463172 RNF146Q9NTX7 359 aa15.38■□□□□ 0.05
HDAC1-203ENST00000463172 RIPK3Q9Y572 518 aa15.38■□□□□ 0.05
HDAC1-203ENST00000463172 PFASO15067 1338 aa15.38■□□□□ 0.05
HDAC1-203ENST00000463172 NEDD4P46934 1319 aa15.38■□□□□ 0.05
HDAC1-203ENST00000463172 SYNGAP1Q96PV0 1343 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms