RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 IQCA1Q86XH1 822 aa21.81■■□□□ 1.08
CDKN1A-206ENST00000462537 CPXCR1Q8N123 301 aa21.81■■□□□ 1.08
CDKN1A-206ENST00000462537 REPS2Q8NFH8 660 aa21.81■■□□□ 1.08
CDKN1A-206ENST00000462537 NKX2-3Q8TAU0 364 aa21.81■■□□□ 1.08
CDKN1A-206ENST00000462537 CHURC1Q8WUH1 139 aa21.81■■□□□ 1.08
CDKN1A-206ENST00000462537 KRT23Q9C075 422 aa21.81■■□□□ 1.08
CDKN1A-206ENST00000462537 CNNM2Q9H8M5 875 aa21.81■■□□□ 1.08
CDKN1A-206ENST00000462537 ZNF214Q9UL59 606 aaPredicted RBP21.81■■□□□ 1.08
CDKN1A-206ENST00000462537 U3KPZ7 1027 aaPredicted RBP21.81■■□□□ 1.08
CDKN1A-206ENST00000462537 GJB1P08034 283 aa21.8■■□□□ 1.08
CDKN1A-206ENST00000462537 FCER1AP12319 257 aa21.8■■□□□ 1.08
CDKN1A-206ENST00000462537 COPB2P35606 906 aa21.8■■□□□ 1.08
CDKN1A-206ENST00000462537 NT5C2P49902 561 aa21.8■■□□□ 1.08
CDKN1A-206ENST00000462537 SNRNP48Q6IEG0 339 aaKnown RBP21.8■■□□□ 1.08
CDKN1A-206ENST00000462537 RCSD1Q6JBY9 416 aa21.8■■□□□ 1.08
CDKN1A-206ENST00000462537 KIAA1211Q6ZU35 1233 aa21.8■■□□□ 1.08
CDKN1A-206ENST00000462537 DCAF4Q8WV16 495 aa21.8■■□□□ 1.08
CDKN1A-206ENST00000462537 TTC14Q96N46 770 aa21.8■■□□□ 1.08
CDKN1A-206ENST00000462537 TEX13BQ9BXU2 312 aa21.8■■□□□ 1.08
CDKN1A-206ENST00000462537 KIAA0100Q14667 2235 aaKnown RBP21.8■■□□□ 1.08
CDKN1A-206ENST00000462537 PRKAR2AP13861 404 aaKnown RBP21.79■■□□□ 1.08
CDKN1A-206ENST00000462537 CCDC178Q5BJE1 867 aa21.79■■□□□ 1.08
CDKN1A-206ENST00000462537 MMP19Q99542 508 aa21.79■■□□□ 1.08
CDKN1A-206ENST00000462537 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.79■■□□□ 1.085e-7■■■■□ 22.2
CDKN1A-206ENST00000462537 SLC38A10Q9HBR0 1119 aa21.79■■□□□ 1.08
CDKN1A-206ENST00000462537 RAVER2Q9HCJ3 691 aaKnown RBP21.79■■□□□ 1.08
CDKN1A-206ENST00000462537 HMX1Q9NP08 348 aaPredicted RBP21.79■■□□□ 1.08
CDKN1A-206ENST00000462537 RPTORQ8N122 1335 aa21.79■■□□□ 1.08
CDKN1A-206ENST00000462537 GJA8P48165 433 aa21.78■■□□□ 1.08
CDKN1A-206ENST00000462537 TRDNQ13061 729 aa21.78■■□□□ 1.08
CDKN1A-206ENST00000462537 U2AF1L4Q8WU68 220 aaKnown RBP21.78■■□□□ 1.08
CDKN1A-206ENST00000462537 DEFB118Q96PH6 123 aa21.78■■□□□ 1.08
CDKN1A-206ENST00000462537 ESYT1Q9BSJ8 1104 aa21.78■■□□□ 1.08
CDKN1A-206ENST00000462537 SLC5A4Q9NY91 659 aa21.78■■□□□ 1.08
CDKN1A-206ENST00000462537 BRCA2P51587 3418 aa21.78■■□□□ 1.08
CDKN1A-206ENST00000462537 CYP21A2P08686 494 aa21.77■■□□□ 1.08
CDKN1A-206ENST00000462537 HOXC6P09630 235 aa21.77■■□□□ 1.08
CDKN1A-206ENST00000462537 FDX1P10109 184 aa21.77■■□□□ 1.08
CDKN1A-206ENST00000462537 KCTD2Q14681 263 aa21.77■■□□□ 1.08
CDKN1A-206ENST00000462537 MFSD14CQ5VZR4 134 aa21.77■■□□□ 1.08
CDKN1A-206ENST00000462537 ABRAQ8N0Z2 381 aa21.77■■□□□ 1.08
CDKN1A-206ENST00000462537 NPLOC4Q8TAT6 608 aa21.77■■□□□ 1.08
CDKN1A-206ENST00000462537 SHISA4Q96DD7 197 aa21.77■■□□□ 1.08
CDKN1A-206ENST00000462537 ZSCAN10Q96SZ4 725 aaPredicted RBP21.77■■□□□ 1.08
CDKN1A-206ENST00000462537 UBAC1Q9BSL1 405 aa21.77■■□□□ 1.08
CDKN1A-206ENST00000462537 PAK6Q9NQU5 681 aaPredicted RBP21.77■■□□□ 1.08
CDKN1A-206ENST00000462537 FLRT1Q9NZU1 646 aa21.77■■□□□ 1.08
CDKN1A-206ENST00000462537 ZSWIM5Q9P217 1185 aa21.77■■□□□ 1.08
CDKN1A-206ENST00000462537 FRMPD2Q68DX3 1309 aaPredicted RBP21.77■■□□□ 1.07
CDKN1A-206ENST00000462537 ZNFX1Q9P2E3 1918 aaKnown RBP21.76■■□□□ 1.07
CDKN1A-206ENST00000462537 ATP2A1O14983 1001 aa21.76■■□□□ 1.07
CDKN1A-206ENST00000462537 PLA2G6O60733 806 aa21.76■■□□□ 1.07
CDKN1A-206ENST00000462537 SGPL1O95470 568 aa21.76■■□□□ 1.07
CDKN1A-206ENST00000462537 TFRCP02786 760 aaKnown RBP21.76■■□□□ 1.07
CDKN1A-206ENST00000462537 CACNB2Q08289 660 aaPredicted RBP21.76■■□□□ 1.07
CDKN1A-206ENST00000462537 DGKHQ86XP1 1220 aa21.76■■□□□ 1.07
CDKN1A-206ENST00000462537 KAT14Q9H8E8 782 aa21.76■■□□□ 1.07
CDKN1A-206ENST00000462537 GPCPD1Q9NPB8 672 aa21.76■■□□□ 1.07
CDKN1A-206ENST00000462537 RBM8AQ9Y5S9 174 aaKnown RBP21.76■■□□□ 1.07
CDKN1A-206ENST00000462537 TNKSO95271 1327 aa21.76■■□□□ 1.07
CDKN1A-206ENST00000462537 COBLO75128 1261 aa21.75■■□□□ 1.07
CDKN1A-206ENST00000462537 OAZ1P54368 228 aa21.75■■□□□ 1.07
CDKN1A-206ENST00000462537 MAP3K21Q5TCX8 1036 aa21.75■■□□□ 1.07
CDKN1A-206ENST00000462537 CASC1Q6TDU7 716 aa21.75■■□□□ 1.07
CDKN1A-206ENST00000462537 RALYLQ86SE5 291 aaKnown RBP21.75■■□□□ 1.07
CDKN1A-206ENST00000462537 MAP4K1Q92918 833 aa21.75■■□□□ 1.07
CDKN1A-206ENST00000462537 RIPK3Q9Y572 518 aa21.75■■□□□ 1.07
CDKN1A-206ENST00000462537 PGK2P07205 417 aa21.74■■□□□ 1.07
CDKN1A-206ENST00000462537 PDHBP11177 359 aa21.74■■□□□ 1.07
CDKN1A-206ENST00000462537 SLC16A2P36021 539 aa21.74■■□□□ 1.07
CDKN1A-206ENST00000462537 SNAP25P60880 206 aa21.74■■□□□ 1.07
CDKN1A-206ENST00000462537 TTBK2Q6IQ55 1244 aa21.74■■□□□ 1.07
CDKN1A-206ENST00000462537 CCDC174Q6PII3 467 aa21.74■■□□□ 1.07
CDKN1A-206ENST00000462537 ENAHQ8N8S7 591 aaPredicted RBP21.74■■□□□ 1.07
CDKN1A-206ENST00000462537 PNMA1Q8ND90 353 aa21.74■■□□□ 1.07
CDKN1A-206ENST00000462537 ANO2Q9NQ90 1003 aa21.74■■□□□ 1.07
CDKN1A-206ENST00000462537 HOMER2Q9NSB8 354 aa21.74■■□□□ 1.07
CDKN1A-206ENST00000462537 PRR12Q9ULL5 1215 aa21.74■■□□□ 1.07
CDKN1A-206ENST00000462537 PLXNA1Q9UIW2 1896 aa21.74■■□□□ 1.07
CDKN1A-206ENST00000462537 TNRC18O15417 2968 aaPredicted RBP21.74■■□□□ 1.07
CDKN1A-206ENST00000462537 E7EWF7 191 aa21.73■■□□□ 1.07
CDKN1A-206ENST00000462537 CDC45O75419 566 aa21.73■■□□□ 1.07
CDKN1A-206ENST00000462537 CYP2C19P33261 490 aa21.73■■□□□ 1.07
CDKN1A-206ENST00000462537 LSG1Q9H089 658 aaKnown RBP21.73■■□□□ 1.07
CDKN1A-206ENST00000462537 PPP4R2Q9NY27 417 aa21.73■■□□□ 1.07
CDKN1A-206ENST00000462537 CCND3P30281 292 aaPredicted RBP21.72■■□□□ 1.07
CDKN1A-206ENST00000462537 IFIT1BQ5T764 474 aaKnown RBP21.72■■□□□ 1.07
CDKN1A-206ENST00000462537 SYDE2Q5VT97 1194 aa21.72■■□□□ 1.07
CDKN1A-206ENST00000462537 OLFML2BQ68BL8 750 aa21.72■■□□□ 1.07
CDKN1A-206ENST00000462537 CYB5R4Q7L1T6 521 aa21.72■■□□□ 1.07
CDKN1A-206ENST00000462537 NCOA7Q8NI08 942 aa21.72■■□□□ 1.07
CDKN1A-206ENST00000462537 DDX11Q96FC9 970 aa21.72■■□□□ 1.07
CDKN1A-206ENST00000462537 AGBL1Q96MI9 1066 aa21.72■■□□□ 1.07
CDKN1A-206ENST00000462537 FBXO40Q9UH90 709 aa21.72■■□□□ 1.07
CDKN1A-206ENST00000462537 TAF6LQ9Y6J9 622 aa21.72■■□□□ 1.07
CDKN1A-206ENST00000462537 CNGA1P29973 690 aa21.71■■□□□ 1.07
CDKN1A-206ENST00000462537 ZNF543Q08ER8 600 aa21.71■■□□□ 1.07
CDKN1A-206ENST00000462537 BTNL9Q6UXG8 535 aa21.71■■□□□ 1.07
CDKN1A-206ENST00000462537 ANKRD35Q8N283 1001 aa21.71■■□□□ 1.07
CDKN1A-206ENST00000462537 CHST13Q8NET6 341 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms