RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 Q3C1V9 767 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 GPATCH4Q5T3I0 446 aaKnown RBP11.19□□□□□ -0.62
PKP4-208ENST00000462335 CCDC174Q6PII3 467 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 CHST3Q7LGC8 479 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 TRMT44Q8IYL2 757 aaKnown RBP11.19□□□□□ -0.62
PKP4-208ENST00000462335 ENAHQ8N8S7 591 aaPredicted RBP11.19□□□□□ -0.62
PKP4-208ENST00000462335 SLAIN1Q8ND83 568 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 DDX11Q96FC9 970 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 NEK1Q96PY6 1258 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 TEX13BQ9BXU2 312 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 BTBD7Q9P203 1132 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 PNMA2Q9UL42 364 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 TACC3Q9Y6A5 838 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 PTCH2Q9Y6C5 1203 aa11.19□□□□□ -0.62
PKP4-208ENST00000462335 SLC15A5A6NIM6 579 aa11.18□□□□□ -0.62
PKP4-208ENST00000462335 PEX10O60683 326 aa11.18□□□□□ -0.62
PKP4-208ENST00000462335 ERCC3P19447 782 aa11.18□□□□□ -0.62
PKP4-208ENST00000462335 NECTIN1Q15223 517 aa11.18□□□□□ -0.62
PKP4-208ENST00000462335 ASPRV1Q53RT3 343 aa11.18□□□□□ -0.62
PKP4-208ENST00000462335 SYDE2Q5VT97 1194 aa11.18□□□□□ -0.62
PKP4-208ENST00000462335 SNRNP48Q6IEG0 339 aaKnown RBP11.18□□□□□ -0.62
PKP4-208ENST00000462335 GPR142Q7Z601 462 aa11.18□□□□□ -0.62
PKP4-208ENST00000462335 SHCBP1Q8NEM2 672 aa11.18□□□□□ -0.62
PKP4-208ENST00000462335 CTCFLQ8NI51 663 aaPredicted RBP11.18□□□□□ -0.62
PKP4-208ENST00000462335 NUP133Q8WUM0 1156 aa11.18□□□□□ -0.62
PKP4-208ENST00000462335 TMEM87BQ96K49 555 aa11.18□□□□□ -0.62
PKP4-208ENST00000462335 MMP19Q99542 508 aa11.18□□□□□ -0.62
PKP4-208ENST00000462335 MOV10L1Q9BXT6 1211 aaKnown RBP11.18□□□□□ -0.62
PKP4-208ENST00000462335 RAVER2Q9HCJ3 691 aaKnown RBP11.18□□□□□ -0.62
PKP4-208ENST00000462335 VAT1LQ9HCJ6 419 aa11.18□□□□□ -0.62
PKP4-208ENST00000462335 FBXO40Q9UH90 709 aa11.18□□□□□ -0.62
PKP4-208ENST00000462335 LAMA4Q16363 1823 aa11.18□□□□□ -0.62
PKP4-208ENST00000462335 PDHBP11177 359 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 KIF5BP33176 963 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 SLC16A2P36021 539 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 TMEM132BQ14DG7 1078 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 MFSD14CQ5VZR4 134 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 BLOC1S2Q6QNY1 142 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 CYB5R4Q7L1T6 521 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 ANKRD35Q8N283 1001 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 SH3TC2Q8TF17 1288 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 ANKS1AQ92625 1134 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 PORCNQ9H237 461 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 HOMER2Q9NSB8 354 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 CCPG1Q9ULG6 757 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 PRR12Q9ULL5 1215 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 GABRQQ9UN88 632 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 SLC12A7Q9Y666 1083 aa11.17□□□□□ -0.62
PKP4-208ENST00000462335 PLA2G6O60733 806 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 GOLGA8HP0CJ92 632 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 CALM1P0DP23 149 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 CALM2P0DP24 149 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 CALM3P0DP25 149 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 ALAS1P13196 640 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 PTPREP23469 700 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 OAZ1P54368 228 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 ZNF543Q08ER8 600 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 TRAF1Q13077 416 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 MAP2K5Q13163 448 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 IRF5Q13568 498 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 DHX32Q7L7V1 743 aaKnown RBP11.16□□□□□ -0.62
PKP4-208ENST00000462335 RIOX2Q8IUF8 465 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 JAKMIP1Q96N16 626 aaKnown RBP11.16□□□□□ -0.62
PKP4-208ENST00000462335 MTA3Q9BTC8 594 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 SLC38A10Q9HBR0 1119 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 MGAMO43451 1857 aa11.16□□□□□ -0.62
PKP4-208ENST00000462335 GREB1LQ9C091 1923 aaPredicted RBP11.15□□□□□ -0.62
PKP4-208ENST00000462335 EPB41L2O43491 1005 aaKnown RBP11.15□□□□□ -0.62
PKP4-208ENST00000462335 CNMDO75829 334 aa11.15□□□□□ -0.62
PKP4-208ENST00000462335 XRCC5P13010 732 aaKnown RBP11.15□□□□□ -0.62
PKP4-208ENST00000462335 ELNP15502 786 aa11.15□□□□□ -0.62
PKP4-208ENST00000462335 CTGFP29279 349 aa11.15□□□□□ -0.62
PKP4-208ENST00000462335 NOVP48745 357 aa11.15□□□□□ -0.62
PKP4-208ENST00000462335 GNAQP50148 359 aa11.15□□□□□ -0.62
PKP4-208ENST00000462335 SNAP25P60880 206 aa11.15□□□□□ -0.62
PKP4-208ENST00000462335 TKFCQ3LXA3 575 aa11.15□□□□□ -0.62
PKP4-208ENST00000462335 TTBK2Q6IQ55 1244 aa11.15□□□□□ -0.62
PKP4-208ENST00000462335 STOX1Q6ZVD7 989 aa11.15□□□□□ -0.62
PKP4-208ENST00000462335 CHST13Q8NET6 341 aa11.15□□□□□ -0.62
PKP4-208ENST00000462335 PXYLP1Q8TE99 480 aa11.15□□□□□ -0.62
PKP4-208ENST00000462335 TRERF1Q96PN7 1200 aa11.15□□□□□ -0.62
PKP4-208ENST00000462335 UBA5Q9GZZ9 404 aa11.15□□□□□ -0.62
PKP4-208ENST00000462335 UPF2Q9HAU5 1272 aaKnown RBP11.15□□□□□ -0.62
PKP4-208ENST00000462335 ADAMTS5Q9UNA0 930 aa11.15□□□□□ -0.62
PKP4-208ENST00000462335 KLRF2D3W0D1 207 aa11.14□□□□□ -0.63
PKP4-208ENST00000462335 HMGCRP04035 888 aa11.14□□□□□ -0.63
PKP4-208ENST00000462335 ADORA2AP29274 412 aa11.14□□□□□ -0.63
PKP4-208ENST00000462335 CNGA1P29973 690 aa11.14□□□□□ -0.63
PKP4-208ENST00000462335 HSPA4P34932 840 aa11.14□□□□□ -0.63
PKP4-208ENST00000462335 MB21D2Q8IYB1 491 aaPredicted RBP11.14□□□□□ -0.63
PKP4-208ENST00000462335 ABRAQ8N0Z2 381 aa11.14□□□□□ -0.63
PKP4-208ENST00000462335 MPHOSPH6Q99547 160 aaKnown RBP11.14□□□□□ -0.63
PKP4-208ENST00000462335 APBA2Q99767 749 aa11.14□□□□□ -0.63
PKP4-208ENST00000462335 LZTS2Q9BRK4 669 aa11.14□□□□□ -0.63
PKP4-208ENST00000462335 LRRC2Q9BYS8 371 aa11.14□□□□□ -0.63
PKP4-208ENST00000462335 RNF208Q9H0X6 261 aa11.14□□□□□ -0.63
PKP4-208ENST00000462335 ACAD9Q9H845 621 aa11.14□□□□□ -0.63
PKP4-208ENST00000462335 HMX1Q9NP08 348 aaPredicted RBP11.14□□□□□ -0.63
PKP4-208ENST00000462335 RNF146Q9NTX7 359 aa11.14□□□□□ -0.63
PKP4-208ENST00000462335 SEC63Q9UGP8 760 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms