RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 SEPT4O43236 478 aa10.48□□□□□ -0.73
LDB1-203ENST00000461873 CTDSPL2Q05D32 466 aa10.48□□□□□ -0.73
LDB1-203ENST00000461873 CCDC96Q2M329 555 aa10.48□□□□□ -0.73
LDB1-203ENST00000461873 MFSD6Q6ZSS7 791 aa10.48□□□□□ -0.73
LDB1-203ENST00000461873 RNF180Q86T96 592 aa10.48□□□□□ -0.73
LDB1-203ENST00000461873 GMCL1P1Q8NEA9 526 aa10.48□□□□□ -0.73
LDB1-203ENST00000461873 MKL1Q969V6 931 aa10.48□□□□□ -0.73
LDB1-203ENST00000461873 MAML3Q96JK9 1138 aa10.48□□□□□ -0.73
LDB1-203ENST00000461873 NUP88Q99567 741 aaPredicted RBP10.48□□□□□ -0.73
LDB1-203ENST00000461873 RNF41Q9H4P4 317 aaPredicted RBP10.48□□□□□ -0.73
LDB1-203ENST00000461873 SPC25Q9HBM1 224 aa10.48□□□□□ -0.73
LDB1-203ENST00000461873 FLRT1Q9NZU1 646 aa10.48□□□□□ -0.73
LDB1-203ENST00000461873 ZMYND8Q9ULU4 1186 aaPredicted RBP10.48□□□□□ -0.73
LDB1-203ENST00000461873 DIS3Q9Y2L1 958 aaKnown RBP10.48□□□□□ -0.73
LDB1-203ENST00000461873 SUPT16HQ9Y5B9 1047 aaKnown RBP10.48□□□□□ -0.73
LDB1-203ENST00000461873 ZNFX1Q9P2E3 1918 aaKnown RBP10.48□□□□□ -0.73
LDB1-203ENST00000461873 COL11A1P12107 1806 aaPredicted RBP10.47□□□□□ -0.73
LDB1-203ENST00000461873 A0A1W2PPC1 479 aa10.47□□□□□ -0.73
LDB1-203ENST00000461873 ZNF213O14771 459 aa10.47□□□□□ -0.73
LDB1-203ENST00000461873 PGK2P07205 417 aa10.47□□□□□ -0.73
LDB1-203ENST00000461873 PCP11498 1178 aaKnown RBP10.47□□□□□ -0.73
LDB1-203ENST00000461873 MCCP23508 829 aa10.47□□□□□ -0.73
LDB1-203ENST00000461873 OAZ1P54368 228 aa10.47□□□□□ -0.73
LDB1-203ENST00000461873 POTEEQ6S8J3 1075 aa10.47□□□□□ -0.73
LDB1-203ENST00000461873 CHST13Q8NET6 341 aa10.47□□□□□ -0.73
LDB1-203ENST00000461873 CHMP4CQ96CF2 233 aa10.47□□□□□ -0.73
LDB1-203ENST00000461873 RAVER2Q9HCJ3 691 aaKnown RBP10.47□□□□□ -0.73
LDB1-203ENST00000461873 RBM27Q9P2N5 1060 aaKnown RBP10.47□□□□□ -0.73
LDB1-203ENST00000461873 NRBP1Q9UHY1 535 aa10.47□□□□□ -0.73
LDB1-203ENST00000461873 ADAMTS5Q9UNA0 930 aa10.47□□□□□ -0.73
LDB1-203ENST00000461873 COBLO75128 1261 aa10.46□□□□□ -0.73
LDB1-203ENST00000461873 CYBAP13498 195 aa10.46□□□□□ -0.73
LDB1-203ENST00000461873 AKR1A1P14550 325 aa10.46□□□□□ -0.73
LDB1-203ENST00000461873 SYN1P17600 705 aa10.46□□□□□ -0.73
LDB1-203ENST00000461873 ATN1P54259 1190 aaPredicted RBP10.46□□□□□ -0.73
LDB1-203ENST00000461873 CCDC178Q5BJE1 867 aa10.46□□□□□ -0.73
LDB1-203ENST00000461873 GJC2Q5T442 439 aaPredicted RBP10.46□□□□□ -0.73
LDB1-203ENST00000461873 ANO1Q5XXA6 986 aa10.46□□□□□ -0.73
LDB1-203ENST00000461873 LHX8Q68G74 356 aa10.46□□□□□ -0.73
LDB1-203ENST00000461873 MSL3Q8N5Y2 521 aaKnown RBP10.46□□□□□ -0.73
LDB1-203ENST00000461873 EXOC6Q8TAG9 804 aa10.46□□□□□ -0.73
LDB1-203ENST00000461873 STAG1Q8WVM7 1258 aa10.46□□□□□ -0.73
LDB1-203ENST00000461873 MPHOSPH6Q99547 160 aaKnown RBP10.46□□□□□ -0.73
LDB1-203ENST00000461873 TINF2Q9BSI4 451 aa10.46□□□□□ -0.73
LDB1-203ENST00000461873 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.46□□□□□ -0.73
LDB1-203ENST00000461873 UBE2OQ9C0C9 1292 aaKnown RBP10.46□□□□□ -0.73
LDB1-203ENST00000461873 ACAD9Q9H845 621 aa10.46□□□□□ -0.73
LDB1-203ENST00000461873 XPNPEP3Q9NQH7 507 aa10.46□□□□□ -0.73
LDB1-203ENST00000461873 HOMER2Q9NSB8 354 aa10.46□□□□□ -0.73
LDB1-203ENST00000461873 ZHX1Q9UKY1 873 aaPredicted RBP10.46□□□□□ -0.73
LDB1-203ENST00000461873 CCDC171Q6TFL3 1326 aa10.46□□□□□ -0.73
LDB1-203ENST00000461873 ZNF236Q9UL36 1845 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 PLIN4Q96Q06 1357 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 IGKV6D-41A0A0C4DH26 115 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 FGAP02671 866 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 HSPD1P10809 573 aaKnown RBP10.45□□□□□ -0.74
LDB1-203ENST00000461873 SDSP20132 328 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 NT5C2P49902 561 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 NUCB1Q02818 461 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 NMIQ13287 307 aaPredicted RBP10.45□□□□□ -0.74
LDB1-203ENST00000461873 ALX1Q15699 326 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 TKFCQ3LXA3 575 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 PRAMEF19Q5SWL8 479 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 RCSD1Q6JBY9 416 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 CCDC174Q6PII3 467 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 CWC27Q6UX04 472 aaKnown RBP10.45□□□□□ -0.74
LDB1-203ENST00000461873 NOL8Q76FK4 1167 aaKnown RBP10.45□□□□□ -0.74
LDB1-203ENST00000461873 IQCA1Q86XH1 822 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 SMC5Q8IY18 1101 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 DCAF4Q8WV16 495 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 ESR2Q92731 530 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 VTI1AQ96AJ9 217 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 GMCL1Q96IK5 515 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 FAM227BQ96M60 508 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 SLC38A10Q9HBR0 1119 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 CTNNA3Q9UI47 895 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 ANAPC4Q9UJX5 808 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 PNMA2Q9UL42 364 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 ZNF214Q9UL59 606 aaPredicted RBP10.45□□□□□ -0.74
LDB1-203ENST00000461873 FAM184BQ9ULE4 1060 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 ATP11BQ9Y2G3 1177 aa10.45□□□□□ -0.74
LDB1-203ENST00000461873 PLXNA1Q9UIW2 1896 aa10.44□□□□□ -0.74
LDB1-203ENST00000461873 A0A0G2JMZ2 1700 aa10.44□□□□□ -0.74
LDB1-203ENST00000461873 POTEB2H3BUK9 544 aa10.44□□□□□ -0.74
LDB1-203ENST00000461873 ATP2A1O14983 1001 aa10.44□□□□□ -0.74
LDB1-203ENST00000461873 ORC4O43929 436 aa10.44□□□□□ -0.74
LDB1-203ENST00000461873 TOP1P11387 765 aaKnown RBP10.44□□□□□ -0.74
LDB1-203ENST00000461873 ALAS1P13196 640 aa10.44□□□□□ -0.74
LDB1-203ENST00000461873 FXR1P51114 621 aaKnown RBP eCLIP10.44□□□□□ -0.74
LDB1-203ENST00000461873 HAND2P61296 217 aa10.44□□□□□ -0.74
LDB1-203ENST00000461873 IRX6P78412 446 aaPredicted RBP10.44□□□□□ -0.74
LDB1-203ENST00000461873 IMMTQ16891 758 aaKnown RBP10.44□□□□□ -0.74
LDB1-203ENST00000461873 ZNF792Q3KQV3 632 aa10.44□□□□□ -0.74
LDB1-203ENST00000461873 VPS53Q5VIR6 699 aa10.44□□□□□ -0.74
LDB1-203ENST00000461873 KCTD1Q719H9 257 aa10.44□□□□□ -0.74
LDB1-203ENST00000461873 NUP133Q8WUM0 1156 aa10.44□□□□□ -0.74
LDB1-203ENST00000461873 RUFY2Q8WXA3 655 aa10.44□□□□□ -0.74
LDB1-203ENST00000461873 PRDM5Q9NQX1 630 aaPredicted RBP10.44□□□□□ -0.74
LDB1-203ENST00000461873 RLFQ13129 1914 aa10.44□□□□□ -0.74
LDB1-203ENST00000461873 PARP14Q460N5 1801 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms