RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 CNPY2Q9Y2B0 182 aa18■□□□□ 0.47
COL16A1-206ENST00000461217 DIS3Q9Y2L1 958 aaKnown RBP18■□□□□ 0.47
COL16A1-206ENST00000461217 RANBP2P49792 3224 aaKnown RBP18■□□□□ 0.47
COL16A1-206ENST00000461217 PLXNA1Q9UIW2 1896 aa17.99■□□□□ 0.47
COL16A1-206ENST00000461217 ZBED4O75132 1171 aa17.99■□□□□ 0.47
COL16A1-206ENST00000461217 SLC3A2P08195 630 aaKnown RBP17.99■□□□□ 0.47
COL16A1-206ENST00000461217 TSPY3P0CV98 308 aa17.99■□□□□ 0.47
COL16A1-206ENST00000461217 TSPY8P0CW00 308 aa17.99■□□□□ 0.47
COL16A1-206ENST00000461217 PDE4BQ07343 736 aa17.99■□□□□ 0.47
COL16A1-206ENST00000461217 TRIM60Q495X7 471 aa17.99■□□□□ 0.47
COL16A1-206ENST00000461217 LRRC47Q8N1G4 583 aaKnown RBP17.99■□□□□ 0.47
COL16A1-206ENST00000461217 KIFC2Q96AC6 838 aa17.99■□□□□ 0.47
COL16A1-206ENST00000461217 CEP95Q96GE4 821 aa17.99■□□□□ 0.47
COL16A1-206ENST00000461217 NAPBQ9H115 298 aa17.99■□□□□ 0.47
COL16A1-206ENST00000461217 PCDHB15Q9Y5E8 787 aa17.99■□□□□ 0.47
COL16A1-206ENST00000461217 MYH4Q9Y623 1939 aa17.98■□□□□ 0.47
COL16A1-206ENST00000461217 IGKV6D-41A0A0C4DH26 115 aa17.98■□□□□ 0.47
COL16A1-206ENST00000461217 AKR1A1P14550 325 aa17.98■□□□□ 0.47
COL16A1-206ENST00000461217 RNF180Q86T96 592 aa17.98■□□□□ 0.47
COL16A1-206ENST00000461217 SLC17A8Q8NDX2 589 aa17.98■□□□□ 0.47
COL16A1-206ENST00000461217 PI4K2BQ8TCG2 481 aa17.98■□□□□ 0.47
COL16A1-206ENST00000461217 OTUD7AQ8TE49 926 aaPredicted RBP17.98■□□□□ 0.47
COL16A1-206ENST00000461217 MTMR4Q9NYA4 1195 aa17.98■□□□□ 0.47
COL16A1-206ENST00000461217 ZNFX1Q9P2E3 1918 aaKnown RBP17.98■□□□□ 0.47
COL16A1-206ENST00000461217 TTLL1O95922 423 aa17.97■□□□□ 0.47
COL16A1-206ENST00000461217 PGK1P00558 417 aa17.97■□□□□ 0.47
COL16A1-206ENST00000461217 TAL1P17542 331 aaPredicted RBP17.97■□□□□ 0.47
COL16A1-206ENST00000461217 MX1P20591 662 aa17.97■□□□□ 0.47
COL16A1-206ENST00000461217 RAVER2Q9HCJ3 691 aaKnown RBP17.97■□□□□ 0.47
COL16A1-206ENST00000461217 RIPK3Q9Y572 518 aa17.97■□□□□ 0.47
COL16A1-206ENST00000461217 LTBP2Q14767 1821 aa17.97■□□□□ 0.47
COL16A1-206ENST00000461217 PPARAQ07869 468 aa17.96■□□□□ 0.47
COL16A1-206ENST00000461217 LENG1Q96BZ8 264 aaPredicted RBP17.96■□□□□ 0.47
COL16A1-206ENST00000461217 FEM1BQ9UK73 627 aa17.96■□□□□ 0.47
COL16A1-206ENST00000461217 ZHX1Q9UKY1 873 aaPredicted RBP17.96■□□□□ 0.47
COL16A1-206ENST00000461217 PLIN4Q96Q06 1357 aa17.95■□□□□ 0.46
COL16A1-206ENST00000461217 SZT2Q5T011 3432 aa17.95■□□□□ 0.46
COL16A1-206ENST00000461217 ZNF865P0CJ78 1059 aaPredicted RBP17.95■□□□□ 0.46
COL16A1-206ENST00000461217 BMP3P12645 472 aa17.95■□□□□ 0.46
COL16A1-206ENST00000461217 TFAP4Q01664 338 aa17.95■□□□□ 0.46
COL16A1-206ENST00000461217 IKQ13123 557 aaPredicted RBP17.95■□□□□ 0.46
COL16A1-206ENST00000461217 SNX17Q15036 470 aa17.95■□□□□ 0.46
COL16A1-206ENST00000461217 ZMYM1Q5SVZ6 1142 aa17.95■□□□□ 0.46
COL16A1-206ENST00000461217 SLFN13Q68D06 897 aa17.95■□□□□ 0.46
COL16A1-206ENST00000461217 B4GALNT3Q6L9W6 998 aa17.95■□□□□ 0.46
COL16A1-206ENST00000461217 ANKRD35Q8N283 1001 aa17.95■□□□□ 0.46
COL16A1-206ENST00000461217 MSL3Q8N5Y2 521 aaKnown RBP17.95■□□□□ 0.46
COL16A1-206ENST00000461217 GMCL1P1Q8NEA9 526 aa17.95■□□□□ 0.46
COL16A1-206ENST00000461217 NEDD1Q8NHV4 660 aa17.95■□□□□ 0.46
COL16A1-206ENST00000461217 MKL1Q969V6 931 aa17.95■□□□□ 0.46
COL16A1-206ENST00000461217 RWDD1Q9H446 243 aaPredicted RBP17.95■□□□□ 0.46
COL16A1-206ENST00000461217 PDLIM7Q9NR12 457 aa17.95■□□□□ 0.46
COL16A1-206ENST00000461217 SYNPO2Q9UMS6 1093 aa17.95■□□□□ 0.46
COL16A1-206ENST00000461217 PHF24Q9UPV7 400 aa17.95■□□□□ 0.46
COL16A1-206ENST00000461217 ATP2A1O14983 1001 aa17.94■□□□□ 0.46
COL16A1-206ENST00000461217 BADQ92934 168 aa17.94■□□□□ 0.46
COL16A1-206ENST00000461217 CHMP4CQ96CF2 233 aa17.94■□□□□ 0.46
COL16A1-206ENST00000461217 SLC38A10Q9HBR0 1119 aa17.94■□□□□ 0.46
COL16A1-206ENST00000461217 HOMER2Q9NSB8 354 aa17.94■□□□□ 0.46
COL16A1-206ENST00000461217 MTMR10Q9NXD2 777 aa17.94■□□□□ 0.46
COL16A1-206ENST00000461217 FBXO40Q9UH90 709 aa17.94■□□□□ 0.46
COL16A1-206ENST00000461217 FAM184BQ9ULE4 1060 aa17.94■□□□□ 0.46
COL16A1-206ENST00000461217 SYNGAP1Q96PV0 1343 aa17.94■□□□□ 0.46
COL16A1-206ENST00000461217 A0A1W2PQ45 241 aaPredicted RBP17.93■□□□□ 0.46
COL16A1-206ENST00000461217 A0A1W2PQY0 241 aa17.93■□□□□ 0.46
COL16A1-206ENST00000461217 TSPY2A6NKD2 308 aa17.93■□□□□ 0.46
COL16A1-206ENST00000461217 TMEM232C9JQI7 657 aa17.93■□□□□ 0.46
COL16A1-206ENST00000461217 STAT2P52630 851 aa17.93■□□□□ 0.46
COL16A1-206ENST00000461217 TLE2Q04725 743 aa17.93■□□□□ 0.46
COL16A1-206ENST00000461217 C1orf53Q5VUE5 145 aa17.93■□□□□ 0.46
COL16A1-206ENST00000461217 CCDC129Q6ZRS4 1044 aa17.93■□□□□ 0.46
COL16A1-206ENST00000461217 DNAJC25-GNG10A0A024R161 153 aa17.92■□□□□ 0.46
COL16A1-206ENST00000461217 PQBP1O60828 265 aaKnown RBP17.92■□□□□ 0.46
COL16A1-206ENST00000461217 SNAI1O95863 264 aaPredicted RBP17.92■□□□□ 0.46
COL16A1-206ENST00000461217 OAZ1P54368 228 aa17.92■□□□□ 0.46
COL16A1-206ENST00000461217 PPP4R3BQ5MIZ7 849 aa17.92■□□□□ 0.46
COL16A1-206ENST00000461217 ANKRD45Q5TZF3 282 aa17.92■□□□□ 0.46
COL16A1-206ENST00000461217 SH3RF1Q7Z6J0 888 aa17.92■□□□□ 0.46
COL16A1-206ENST00000461217 CHST13Q8NET6 341 aa17.92■□□□□ 0.46
COL16A1-206ENST00000461217 STX8Q9UNK0 236 aa17.92■□□□□ 0.46
COL16A1-206ENST00000461217 STXBP5LQ9Y2K9 1186 aa17.92■□□□□ 0.46
COL16A1-206ENST00000461217 TACC3Q9Y6A5 838 aa17.92■□□□□ 0.46
COL16A1-206ENST00000461217 SYNRGQ9UMZ2 1314 aa17.92■□□□□ 0.46
COL16A1-206ENST00000461217 ADAMTS4O75173 837 aa17.91■□□□□ 0.46
COL16A1-206ENST00000461217 CLTBP09497 229 aa17.91■□□□□ 0.46
COL16A1-206ENST00000461217 FDX1P10109 184 aa17.91■□□□□ 0.46
COL16A1-206ENST00000461217 SLC1A4P43007 532 aa17.91■□□□□ 0.46
COL16A1-206ENST00000461217 CTDSPL2Q05D32 466 aa17.91■□□□□ 0.46
COL16A1-206ENST00000461217 HDAC1Q13547 482 aaPredicted RBP17.91■□□□□ 0.46
COL16A1-206ENST00000461217 SHHQ15465 462 aa17.91■□□□□ 0.46
COL16A1-206ENST00000461217 MAMDC4Q6UXC1 1216 aa17.91■□□□□ 0.46
COL16A1-206ENST00000461217 CENPQQ7L2Z9 268 aaPredicted RBP17.91■□□□□ 0.46
COL16A1-206ENST00000461217 ZNF467Q7Z7K2 595 aaPredicted RBP17.91■□□□□ 0.46
COL16A1-206ENST00000461217 FAM160B2Q86V87 743 aa17.91■□□□□ 0.46
COL16A1-206ENST00000461217 CHURC1Q8WUH1 139 aa17.91■□□□□ 0.46
COL16A1-206ENST00000461217 FAM161BQ96MY7 647 aa17.91■□□□□ 0.46
COL16A1-206ENST00000461217 STARD7Q9NQZ5 370 aa17.91■□□□□ 0.46
COL16A1-206ENST00000461217 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.91■□□□□ 0.46
COL16A1-206ENST00000461217 TRIM43BA6NCK2 446 aa17.9■□□□□ 0.46
COL16A1-206ENST00000461217 MCCP23508 829 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms