RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 TAF1CQ15572 869 aaPredicted RBP16.12■□□□□ 0.17
CHRD-209ENST00000461120 NFXL1Q6ZNB6 911 aa16.12■□□□□ 0.17
CHRD-209ENST00000461120 SGMS1Q86VZ5 419 aa16.12■□□□□ 0.17
CHRD-209ENST00000461120 ZNF654Q8IZM8 581 aa16.12■□□□□ 0.17
CHRD-209ENST00000461120 CD99L2Q8TCZ2 262 aa16.12■□□□□ 0.17
CHRD-209ENST00000461120 FAM122AQ96E09 287 aa16.12■□□□□ 0.17
CHRD-209ENST00000461120 AGXT2Q9BYV1 514 aa16.12■□□□□ 0.17
CHRD-209ENST00000461120 TANGO6Q9C0B7 1094 aa16.12■□□□□ 0.17
CHRD-209ENST00000461120 ASCC2Q9H1I8 757 aaPredicted RBP16.12■□□□□ 0.17
CHRD-209ENST00000461120 PDRG1Q9NUG6 133 aa16.12■□□□□ 0.17
CHRD-209ENST00000461120 IRX3P78415 501 aaPredicted RBP16.11■□□□□ 0.17
CHRD-209ENST00000461120 TROAPQ12815 778 aa16.11■□□□□ 0.17
CHRD-209ENST00000461120 CCDC96Q2M329 555 aa16.11■□□□□ 0.17
CHRD-209ENST00000461120 CATIPQ7Z7H3 387 aa16.11■□□□□ 0.17
CHRD-209ENST00000461120 BRF1Q92994 677 aa16.11■□□□□ 0.17
CHRD-209ENST00000461120 PARK7Q99497 189 aaKnown RBP16.11■□□□□ 0.17
CHRD-209ENST00000461120 PNMA3Q9UL41 463 aa16.11■□□□□ 0.17
CHRD-209ENST00000461120 DDAH1O94760 285 aa16.1■□□□□ 0.17
CHRD-209ENST00000461120 CYP2C8P10632 490 aa16.1■□□□□ 0.17
CHRD-209ENST00000461120 PLA2G5P39877 138 aa16.1■□□□□ 0.17
CHRD-209ENST00000461120 NEK4P51957 841 aa16.1■□□□□ 0.17
CHRD-209ENST00000461120 ZNF543Q08ER8 600 aa16.1■□□□□ 0.17
CHRD-209ENST00000461120 TOB2Q14106 344 aaPredicted RBP16.1■□□□□ 0.17
CHRD-209ENST00000461120 KCTD1Q719H9 257 aa16.1■□□□□ 0.17
CHRD-209ENST00000461120 P2RX7Q99572 595 aaKnown RBP16.1■□□□□ 0.17
CHRD-209ENST00000461120 MYL10Q9BUA6 226 aa16.1■□□□□ 0.17
CHRD-209ENST00000461120 ALDH8A1Q9H2A2 487 aaPredicted RBP16.1■□□□□ 0.17
CHRD-209ENST00000461120 FBXO28Q9NVF7 368 aa16.1■□□□□ 0.17
CHRD-209ENST00000461120 BRPF3Q9ULD4 1205 aa16.1■□□□□ 0.17
CHRD-209ENST00000461120 ISY1Q9ULR0 285 aaKnown RBP16.1■□□□□ 0.17
CHRD-209ENST00000461120 SLC12A7Q9Y666 1083 aa16.1■□□□□ 0.17
CHRD-209ENST00000461120 KLF18A0A0U1RQI7 1052 aa16.09■□□□□ 0.17
CHRD-209ENST00000461120 TMEM232C9JQI7 657 aa16.09■□□□□ 0.17
CHRD-209ENST00000461120 FLOT1O75955 427 aa16.09■□□□□ 0.17
CHRD-209ENST00000461120 PARP1P09874 1014 aaKnown RBP16.09■□□□□ 0.17
CHRD-209ENST00000461120 SP3Q02447 781 aa16.09■□□□□ 0.17
CHRD-209ENST00000461120 APOBRQ0VD83 1088 aa16.09■□□□□ 0.17
CHRD-209ENST00000461120 CRHR2Q13324 411 aa16.09■□□□□ 0.17
CHRD-209ENST00000461120 COG2Q14746 738 aa16.09■□□□□ 0.17
CHRD-209ENST00000461120 GRM4Q14833 912 aa16.09■□□□□ 0.17
CHRD-209ENST00000461120 GPATCH4Q5T3I0 446 aaKnown RBP16.09■□□□□ 0.17
CHRD-209ENST00000461120 APOA5Q6Q788 366 aa16.09■□□□□ 0.17
CHRD-209ENST00000461120 NUP133Q8WUM0 1156 aa16.09■□□□□ 0.17
CHRD-209ENST00000461120 ZFYVE28Q9HCC9 887 aa16.09■□□□□ 0.17
CHRD-209ENST00000461120 GPCPD1Q9NPB8 672 aa16.09■□□□□ 0.17
CHRD-209ENST00000461120 FEM1BQ9UK73 627 aa16.09■□□□□ 0.17
CHRD-209ENST00000461120 FRMPD2Q68DX3 1309 aaPredicted RBP16.09■□□□□ 0.17
CHRD-209ENST00000461120 ADGRA2Q96PE1 1338 aa16.09■□□□□ 0.17
CHRD-209ENST00000461120 RLFQ13129 1914 aa16.09■□□□□ 0.17
CHRD-209ENST00000461120 SPDYE16A6NNV3 312 aaPredicted RBP16.08■□□□□ 0.16
CHRD-209ENST00000461120 PLA2G6O60733 806 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 GOLGA8HP0CJ92 632 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 DSG3P32926 999 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 HERVK_113P62684 666 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 RABEP1Q15276 862 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 ASPRV1Q53RT3 343 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 TTBK2Q6IQ55 1244 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 SYNE3Q6ZMZ3 975 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 FAM160B2Q86V87 743 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 CHURC1Q8WUH1 139 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 MAP3K14Q99558 947 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 SLF1Q9BQI6 1058 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 HOXC10Q9NYD6 342 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 PPP1R9AQ9ULJ8 1098 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 MYPNQ86TC9 1320 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 PARP14Q460N5 1801 aa16.08■□□□□ 0.16
CHRD-209ENST00000461120 TTC28Q96AY4 2481 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 PALM3A6NDB9 673 aaPredicted RBP16.07■□□□□ 0.16
CHRD-209ENST00000461120 ZBTB43O43298 467 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 TLR2O60603 784 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 MYCP01106 439 aaPredicted RBP16.07■□□□□ 0.16
CHRD-209ENST00000461120 CALM1P0DP23 149 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 CALM2P0DP24 149 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 CALM3P0DP25 149 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 RXRAP19793 462 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 STAT2P52630 851 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 AK2P54819 239 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 EVCP57679 992 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 SAMD1Q6SPF0 538 aaPredicted RBP16.07■□□□□ 0.16
CHRD-209ENST00000461120 BTNL9Q6UXG8 535 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 LBX2Q6XYB7 198 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 MICU3Q86XE3 530 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 RAB11FIP4Q86YS3 637 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 STAG2Q8N3U4 1231 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 PRPF38AQ8NAV1 312 aaKnown RBP16.07■□□□□ 0.16
CHRD-209ENST00000461120 SMCR8Q8TEV9 937 aaPredicted RBP16.07■□□□□ 0.16
CHRD-209ENST00000461120 ATG4CQ96DT6 458 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 MTMR10Q9NXD2 777 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 MAD2L2Q9UI95 211 aa16.07■□□□□ 0.16
CHRD-209ENST00000461120 SLC16A2P36021 539 aa16.06■□□□□ 0.16
CHRD-209ENST00000461120 GCLCP48506 637 aaPredicted RBP16.06■□□□□ 0.16
CHRD-209ENST00000461120 RCAN1P53805 252 aa16.06■□□□□ 0.16
CHRD-209ENST00000461120 IKQ13123 557 aaPredicted RBP16.06■□□□□ 0.16
CHRD-209ENST00000461120 ANKRD1Q15327 319 aa16.06■□□□□ 0.16
CHRD-209ENST00000461120 POTEEQ6S8J3 1075 aa16.06■□□□□ 0.16
CHRD-209ENST00000461120 CTCFLQ8NI51 663 aaPredicted RBP16.06■□□□□ 0.16
CHRD-209ENST00000461120 GTF3C2Q8WUA4 911 aaPredicted RBP16.06■□□□□ 0.16
CHRD-209ENST00000461120 KIFC2Q96AC6 838 aa16.06■□□□□ 0.16
CHRD-209ENST00000461120 LARP6Q9BRS8 491 aaKnown RBP16.06■□□□□ 0.16
CHRD-209ENST00000461120 NAP1L2Q9ULW6 460 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms