RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 DTNBO60941 627 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ZNF496Q96IT1 587 aaPredicted RBP6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 JADE2Q9NQC1 790 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CCT6AP40227 531 aaKnown RBP6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 SLC39A6Q13433 755 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PPP2R5AQ15172 486 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TAF1CQ15572 869 aaPredicted RBP6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ARHGEF16Q5VV41 709 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 BRF1Q92994 677 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TTC1Q99614 292 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MCM9Q9NXL9 1143 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PYCARDQ9ULZ3 195 aa6.94□□□□□ -1.3
HLA-DQA1-205ENST00000460633 EBAG9O00559 213 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 OAS2P29728 719 aaKnown RBP6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 NNMTP40261 264 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PAFAH1B1P43034 410 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 SYKP43405 635 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 APLP1P51693 650 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PPP2R3AQ06190 1150 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 DPYDQ12882 1025 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TMEM67Q5HYA8 995 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 HDXQ7Z353 690 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CACNA2D4Q7Z3S7 1137 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 SRGAP1Q7Z6B7 1085 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ZBTB38Q8NAP3 1195 aaPredicted RBP6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PHACTR3Q96KR7 559 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 DHX36Q9H2U1 1008 aaKnown RBP6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 HSF2BPO75031 334 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 BRD1O95696 1058 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ZNF853P0CG23 659 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 RPL13P26373 211 aaKnown RBP6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 RECQLP46063 649 aaPredicted RBP6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ATXN3P54252 364 aaPredicted RBP6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CCDC40Q4G0X9 1142 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CCDC102BQ68D86 513 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MAATS1Q7Z4T9 603 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 DYDC1Q8WWB3 177 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 KIFAP3Q92845 792 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CFAP36Q96G28 342 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CARD6Q9BX69 1037 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 LGR6Q9HBX8 967 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 LZTFL1Q9NQ48 299 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CTAGE9A4FU28 777 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 HOXA2O43364 376 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CD2BP2O95400 341 aaKnown RBP6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 STAG3L1P0CL83 205 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CYP19A1P11511 503 aaPredicted RBP6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CIITAP33076 1130 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 EN1Q05925 392 aaPredicted RBP6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 KRT79Q5XKE5 535 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 HELBQ8NG08 1087 aaPredicted RBP6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ABCA3Q99758 1704 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 DDX23Q9BUQ8 820 aaKnown RBP6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 INCENPQ9NQS7 918 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 WWC3Q9ULE0 1092 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 USP16Q9Y5T5 823 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 UBA7P41226 1012 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 LRMPQ12912 555 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 SNAPC2Q13487 334 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PTPROQ16827 1216 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 INF2Q27J81 1249 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 RNF219Q5W0B1 726 aaPredicted RBP6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 HS6ST3Q8IZP7 471 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 DTNBP1Q96EV8 351 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 MYCBPQ99417 103 aaPredicted RBP6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 DDX50Q9BQ39 737 aaKnown RBP6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 BRIP1Q9BX63 1249 aa6.93□□□□□ -1.3
HLA-DQA1-205ENST00000460633 IFFO1Q0D2I5 559 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 FAM173BQ6P4H8 233 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 Q6ZUG5 572 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 VPS50Q96JG6 964 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 USO1O60763 962 aaKnown RBP6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 LMNB1P20700 586 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ATP8B2P98198 1209 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 NR1H3Q13133 447 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 PPP2R5BQ15173 497 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 C9orf131Q5VYM1 1079 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CEP57Q86XR8 500 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 NEK11Q8NG66 645 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CCDC114Q96M63 670 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CRAMP1Q96RY5 1269 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 COPRSQ9NQ92 184 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TRIM35Q9UPQ4 493 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 USP17L3A6NCW0 530 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 USP17L4A6NCW7 530 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ASB14A6NK59 587 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 ZBTB22O15209 634 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 HEXIM1O94992 359 aaKnown RBP6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TRIM28Q13263 835 aaKnown RBP6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 UBE4AQ14139 1066 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 HERC4Q5GLZ8 1057 aaPredicted RBP6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 C6orf163Q5TEZ5 329 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 USP17L1Q7RTZ2 530 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 FAM160B2Q86V87 743 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TNS4Q8IZW8 715 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 N4BP2L2Q92802 583 aaPredicted RBP6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 TSEN34Q9BSV6 310 aaKnown RBP6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 CLSTN2Q9H4D0 955 aa6.92□□□□□ -1.3
HLA-DQA1-205ENST00000460633 VAT1LQ9HCJ6 419 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms