RNA–Protein interactions for RNA: ENST00000460625.1

UPK1B-202, Transcript of uroplakin 1B, humanhuman

TSL 1 (best) BASIC

Gene UPK1B, Length 1,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-202ENST00000460625 POTEIP0CG38 1075 aa12.53□□□□□ -0.4
UPK1B-202ENST00000460625 POTEJP0CG39 1038 aa12.53□□□□□ -0.4
UPK1B-202ENST00000460625 KRT2P35908 639 aa12.53□□□□□ -0.4
UPK1B-202ENST00000460625 TOB1P50616 345 aaPredicted RBP12.53□□□□□ -0.4
UPK1B-202ENST00000460625 SNAP25P60880 206 aa12.53□□□□□ -0.4
UPK1B-202ENST00000460625 SUPT20HL1Q3ZLR7 823 aa12.53□□□□□ -0.4
UPK1B-202ENST00000460625 FAM83BQ5T0W9 1011 aa12.53□□□□□ -0.4
UPK1B-202ENST00000460625 TNFRSF25Q93038 417 aa12.53□□□□□ -0.4
UPK1B-202ENST00000460625 MTMR8Q96EF0 704 aa12.53□□□□□ -0.4
UPK1B-202ENST00000460625 SCAND2PQ9GZW5 306 aaPredicted RBP12.53□□□□□ -0.4
UPK1B-202ENST00000460625 VCPKMTQ9H867 229 aa12.53□□□□□ -0.4
UPK1B-202ENST00000460625 SEC63Q9UGP8 760 aaKnown RBP12.53□□□□□ -0.4
UPK1B-202ENST00000460625 CFAP45Q9UL16 551 aa12.53□□□□□ -0.4
UPK1B-202ENST00000460625 DDX49Q9Y6V7 483 aaKnown RBP12.53□□□□□ -0.4
UPK1B-202ENST00000460625 PHIPQ8WWQ0 1821 aa12.53□□□□□ -0.4
UPK1B-202ENST00000460625 PTMSP20962 102 aa12.52□□□□□ -0.4
UPK1B-202ENST00000460625 SCYL3Q8IZE3 742 aa12.52□□□□□ -0.4
UPK1B-202ENST00000460625 COA7Q96BR5 231 aa12.52□□□□□ -0.4
UPK1B-202ENST00000460625 HOOK2Q96ED9 719 aa12.52□□□□□ -0.4
UPK1B-202ENST00000460625 ZNF396Q96N95 335 aaPredicted RBP12.52□□□□□ -0.4
UPK1B-202ENST00000460625 GOPCQ9HD26 462 aa12.52□□□□□ -0.4
UPK1B-202ENST00000460625 SH3GLB2Q9NR46 395 aa12.52□□□□□ -0.4
UPK1B-202ENST00000460625 KLHL40Q2TBA0 621 aa12.52□□□□□ -0.41
UPK1B-202ENST00000460625 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.52□□□□□ -0.41
UPK1B-202ENST00000460625 RASGRP4Q8TDF6 673 aa12.52□□□□□ -0.41
UPK1B-202ENST00000460625 ZC3H15Q8WU90 426 aaKnown RBP12.52□□□□□ -0.41
UPK1B-202ENST00000460625 PGBD1Q96JS3 809 aa12.52□□□□□ -0.41
UPK1B-202ENST00000460625 RTEL1Q9NZ71 1219 aa12.52□□□□□ -0.41
UPK1B-202ENST00000460625 RCOR1Q9UKL0 485 aa12.52□□□□□ -0.41
UPK1B-202ENST00000460625 ELP1O95163 1332 aa12.52□□□□□ -0.41
UPK1B-202ENST00000460625 PAPPA2Q9BXP8 1791 aa12.52□□□□□ -0.41
UPK1B-202ENST00000460625 OTOFQ9HC10 1997 aa12.52□□□□□ -0.41
UPK1B-202ENST00000460625 PNMA6FA0A0J9YX94 578 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 IQCA1LA6NCM1 817 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 M0R2N6 131 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 WNT7AO00755 349 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 ZBTB5O15062 677 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 PTPRAP18433 802 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 NAPAP54920 295 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 QRICH1Q2TAL8 776 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 ANO1Q5XXA6 986 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 ATL3Q6DD88 541 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 CDCA5Q96FF9 252 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 FEZ1Q99689 392 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 GZF1Q9H116 711 aaPredicted RBP12.51□□□□□ -0.41
UPK1B-202ENST00000460625 GINM1Q9NU53 330 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 POLR3EQ9NVU0 708 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 PCDHA4Q9UN74 947 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 SMCHD1A6NHR9 2005 aa12.51□□□□□ -0.41
UPK1B-202ENST00000460625 TAL1P17542 331 aaPredicted RBP12.5□□□□□ -0.41
UPK1B-202ENST00000460625 NASPP49321 788 aaPredicted RBP12.5□□□□□ -0.41
UPK1B-202ENST00000460625 UBE2HP62256 183 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 IKQ13123 557 aaPredicted RBP12.5□□□□□ -0.41
UPK1B-202ENST00000460625 MTMR2Q13614 643 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 SF3A1Q15459 793 aaKnown RBP12.5□□□□□ -0.41
UPK1B-202ENST00000460625 CDC37Q16543 378 aaPredicted RBP12.5□□□□□ -0.41
UPK1B-202ENST00000460625 CSPP1Q1MSJ5 1256 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 SKOR2Q2VWA4 1001 aaPredicted RBP12.5□□□□□ -0.41
UPK1B-202ENST00000460625 SYDE2Q5VT97 1194 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 BTNL9Q6UXG8 535 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 BLIDQ8IZY5 108 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 LINC00301Q8NCQ3 95 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 CCDC148Q8NFR7 591 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 ZMYND12Q9H0C1 365 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 SH2D4AQ9H788 454 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 SMCO2A6NFE2 343 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 ATP2B1P20020 1258 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 CALML3P27482 149 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 SPP2Q13103 211 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.5□□□□□ -0.41
UPK1B-202ENST00000460625 MOB2Q70IA6 237 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 KIAA1683Q9H0B3 1180 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 BRMS1Q9HCU9 246 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 PICK1Q9NRD5 415 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 EMILIN3Q9NT22 766 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 FBXO28Q9NVF7 368 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
UPK1B-202ENST00000460625 PRR12Q9ULL5 1215 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 PCDHA6Q9UN73 950 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 PCDHA8Q9Y5H6 950 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 ZHX2Q9Y6X8 837 aa12.5□□□□□ -0.41
UPK1B-202ENST00000460625 STAT2P52630 851 aa12.49□□□□□ -0.41
UPK1B-202ENST00000460625 VGLL4Q14135 290 aa12.49□□□□□ -0.41
UPK1B-202ENST00000460625 PTPAQ15257 358 aa12.49□□□□□ -0.41
UPK1B-202ENST00000460625 NOL9Q5SY16 702 aaKnown RBP12.49□□□□□ -0.41
UPK1B-202ENST00000460625 PIK3AP1Q6ZUJ8 805 aa12.49□□□□□ -0.41
UPK1B-202ENST00000460625 DAGLBQ8NCG7 672 aa12.49□□□□□ -0.41
UPK1B-202ENST00000460625 WDR18Q9BV38 432 aa12.49□□□□□ -0.41
UPK1B-202ENST00000460625 RRAGCQ9HB90 399 aa12.49□□□□□ -0.41
UPK1B-202ENST00000460625 PCDHB6Q9Y5E3 794 aa12.49□□□□□ -0.41
UPK1B-202ENST00000460625 SNCAIPQ9Y6H5 919 aa12.49□□□□□ -0.41
UPK1B-202ENST00000460625 TRIM75PA6NK02 468 aa12.49□□□□□ -0.41
UPK1B-202ENST00000460625 FMR1Q06787 632 aaKnown RBP eCLIP12.49□□□□□ -0.41
UPK1B-202ENST00000460625 STK38Q15208 465 aa12.49□□□□□ -0.41
UPK1B-202ENST00000460625 RILPL1Q5EBL4 403 aa12.49□□□□□ -0.41
UPK1B-202ENST00000460625 CAVIN1Q6NZI2 390 aaKnown RBP12.49□□□□□ -0.41
UPK1B-202ENST00000460625 PNMA8AQ86V59 439 aaPredicted RBP12.49□□□□□ -0.41
UPK1B-202ENST00000460625 ZNF280CQ8ND82 737 aa12.49□□□□□ -0.41
UPK1B-202ENST00000460625 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
UPK1B-202ENST00000460625 KIFC2Q96AC6 838 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms