RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 TAB2Q9NYJ8 693 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 AFF2P51816 1311 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 ZSCAN12O43309 604 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 C12orf60Q5U649 245 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 SLF2Q8IX21 1173 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 TRIM47Q96LD4 638 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 PHF20Q9BVI0 1012 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 TUBE1Q9UJT0 475 aa17.34■□□□□ 0.37
LMNB1-203ENST00000460265 CRYBG1Q9Y4K1 1723 aa17.33■□□□□ 0.37
LMNB1-203ENST00000460265 CACNB3P54284 484 aa17.33■□□□□ 0.37
LMNB1-203ENST00000460265 STIM1Q13586 685 aa17.33■□□□□ 0.37
LMNB1-203ENST00000460265 CNTNAP4Q9C0A0 1308 aa17.33■□□□□ 0.37
LMNB1-203ENST00000460265 CDK8P49336 464 aa17.33■□□□□ 0.36
LMNB1-203ENST00000460265 PSEN1P49768 467 aa17.33■□□□□ 0.36
LMNB1-203ENST00000460265 EP400NLQ6ZTU2 488 aa17.33■□□□□ 0.36
LMNB1-203ENST00000460265 SPECC1LQ69YQ0 1117 aa17.33■□□□□ 0.36
LMNB1-203ENST00000460265 KIAA0825Q8IV33 1275 aa17.33■□□□□ 0.36
LMNB1-203ENST00000460265 LAMB4A4D0S4 1761 aa17.32■□□□□ 0.36
LMNB1-203ENST00000460265 CCP110O43303 1012 aa17.32■□□□□ 0.36
LMNB1-203ENST00000460265 TECP42680 631 aa17.32■□□□□ 0.36
LMNB1-203ENST00000460265 ASIC1P78348 528 aa17.32■□□□□ 0.36
LMNB1-203ENST00000460265 PPP1R13BQ96KQ4 1090 aa17.32■□□□□ 0.36
LMNB1-203ENST00000460265 ANAPC4Q9UJX5 808 aa17.32■□□□□ 0.36
LMNB1-203ENST00000460265 FAM196BA6NMK8 535 aa17.32■□□□□ 0.36
LMNB1-203ENST00000460265 BMP6P22004 513 aa17.32■□□□□ 0.36
LMNB1-203ENST00000460265 CUL4BQ13620 913 aa17.32■□□□□ 0.36
LMNB1-203ENST00000460265 RC3H1Q5TC82 1133 aaKnown RBP17.32■□□□□ 0.36
LMNB1-203ENST00000460265 COA7Q96BR5 231 aa17.32■□□□□ 0.36
LMNB1-203ENST00000460265 C6orf50Q9HD87 102 aa17.32■□□□□ 0.36
LMNB1-203ENST00000460265 TEX33O43247 280 aa17.31■□□□□ 0.36
LMNB1-203ENST00000460265 PFKFB3Q16875 520 aaPredicted RBP17.31■□□□□ 0.36
LMNB1-203ENST00000460265 DPP8Q6V1X1 898 aaPredicted RBP17.31■□□□□ 0.36
LMNB1-203ENST00000460265 USP40Q9NVE5 1235 aa17.31■□□□□ 0.36
LMNB1-203ENST00000460265 CCDC12Q8WUD4 166 aaPredicted RBP17.31■□□□□ 0.36
LMNB1-203ENST00000460265 PIGSQ96S52 555 aa17.31■□□□□ 0.36
LMNB1-203ENST00000460265 DBNDD1Q9H9R9 158 aa17.31■□□□□ 0.36
LMNB1-203ENST00000460265 LRRC4BQ9NT99 713 aa17.31■□□□□ 0.36
LMNB1-203ENST00000460265 NUP98P52948 1817 aa17.31■□□□□ 0.36
LMNB1-203ENST00000460265 PCP11498 1178 aaKnown RBP17.31■□□□□ 0.36
LMNB1-203ENST00000460265 ATP2B4P23634 1241 aa17.31■□□□□ 0.36
LMNB1-203ENST00000460265 SLC16A2P36021 539 aa17.31■□□□□ 0.36
LMNB1-203ENST00000460265 GDAQ9Y2T3 454 aa17.31■□□□□ 0.36
LMNB1-203ENST00000460265 A0A087X0B3 334 aa17.3■□□□□ 0.36
LMNB1-203ENST00000460265 UBXN1Q04323 297 aa17.3■□□□□ 0.36
LMNB1-203ENST00000460265 E4F1Q66K89 784 aaPredicted RBP17.3■□□□□ 0.36
LMNB1-203ENST00000460265 MYO5AQ9Y4I1 1855 aaKnown RBP17.3■□□□□ 0.36
LMNB1-203ENST00000460265 CNTNAP5Q8WYK1 1306 aa17.3■□□□□ 0.36
LMNB1-203ENST00000460265 ORC4O43929 436 aa17.3■□□□□ 0.36
LMNB1-203ENST00000460265 PLCG2P16885 1265 aa17.3■□□□□ 0.36
LMNB1-203ENST00000460265 CEP95Q96GE4 821 aa17.3■□□□□ 0.36
LMNB1-203ENST00000460265 TANGO6Q9C0B7 1094 aa17.3■□□□□ 0.36
LMNB1-203ENST00000460265 ADAM21Q9UKJ8 722 aa17.3■□□□□ 0.36
LMNB1-203ENST00000460265 DYMQ7RTS9 669 aa17.3■□□□□ 0.36
LMNB1-203ENST00000460265 DGKHQ86XP1 1220 aa17.3■□□□□ 0.36
LMNB1-203ENST00000460265 VSTM4Q8IW00 320 aa17.3■□□□□ 0.36
LMNB1-203ENST00000460265 NELFBQ8WX92 580 aa17.3■□□□□ 0.36
LMNB1-203ENST00000460265 IL17RBQ9NRM6 502 aa17.3■□□□□ 0.36
LMNB1-203ENST00000460265 PCDHA4Q9UN74 947 aa17.3■□□□□ 0.36
LMNB1-203ENST00000460265 AKR1B15C9JRZ8 316 aaPredicted RBP17.29■□□□□ 0.36
LMNB1-203ENST00000460265 SLURP2P0DP57 97 aa17.29■□□□□ 0.36
LMNB1-203ENST00000460265 SKIDA1Q1XH10 827 aa17.29■□□□□ 0.36
LMNB1-203ENST00000460265 EPC1Q9H2F5 836 aa17.29■□□□□ 0.36
LMNB1-203ENST00000460265 ANKRD65E5RJM6 399 aa17.29■□□□□ 0.36
LMNB1-203ENST00000460265 ACTN2P35609 894 aa17.29■□□□□ 0.36
LMNB1-203ENST00000460265 OSBPL5Q9H0X9 879 aaPredicted RBP17.29■□□□□ 0.36
LMNB1-203ENST00000460265 ZRANB2O95218 330 aaKnown RBP eCLIP17.29■□□□□ 0.36
LMNB1-203ENST00000460265 IPO7O95373 1038 aaKnown RBP17.29■□□□□ 0.36
LMNB1-203ENST00000460265 GNA11P29992 359 aa17.29■□□□□ 0.36
LMNB1-203ENST00000460265 WWC2Q6AWC2 1192 aa17.29■□□□□ 0.36
LMNB1-203ENST00000460265 BPIFA3Q9BQP9 254 aa17.29■□□□□ 0.36
LMNB1-203ENST00000460265 MTA3Q9BTC8 594 aa17.29■□□□□ 0.36
LMNB1-203ENST00000460265 CARD6Q9BX69 1037 aa17.29■□□□□ 0.36
LMNB1-203ENST00000460265 ATRNO75882 1429 aa17.28■□□□□ 0.36
LMNB1-203ENST00000460265 USP17L5A8MUK1 530 aa17.28■□□□□ 0.36
LMNB1-203ENST00000460265 ADAMTS3O15072 1205 aa17.28■□□□□ 0.36
LMNB1-203ENST00000460265 ACTN4O43707 911 aaKnown RBP17.28■□□□□ 0.36
LMNB1-203ENST00000460265 KRT18P05783 430 aaKnown RBP17.28■□□□□ 0.36
LMNB1-203ENST00000460265 MTIF2P46199 727 aaKnown RBP17.28■□□□□ 0.36
LMNB1-203ENST00000460265 PAK1Q13153 545 aa17.28■□□□□ 0.36
LMNB1-203ENST00000460265 KIF4BQ2VIQ3 1234 aa17.28■□□□□ 0.36
LMNB1-203ENST00000460265 TRMT1LQ7Z2T5 733 aaKnown RBP17.28■□□□□ 0.36
LMNB1-203ENST00000460265 ENOX1Q8TC92 643 aaKnown RBP17.28■□□□□ 0.36
LMNB1-203ENST00000460265 ARFGAP3Q9NP61 516 aa17.28■□□□□ 0.36
LMNB1-203ENST00000460265 APBA3O96018 575 aa17.28■□□□□ 0.36
LMNB1-203ENST00000460265 IVLP07476 585 aa17.28■□□□□ 0.36
LMNB1-203ENST00000460265 TAF1P21675 1872 aa17.28■□□□□ 0.36
LMNB1-203ENST00000460265 TJP1Q07157 1748 aa17.28■□□□□ 0.36
LMNB1-203ENST00000460265 NONOQ15233 471 aaKnown RBP eCLIP17.28■□□□□ 0.369e-7■■□□□ 12.5
LMNB1-203ENST00000460265 ENOX2Q16206 610 aaKnown RBP17.28■□□□□ 0.36
LMNB1-203ENST00000460265 CALML4Q96GE6 196 aa17.28■□□□□ 0.36
LMNB1-203ENST00000460265 L2HGDHQ9H9P8 463 aa17.28■□□□□ 0.36
LMNB1-203ENST00000460265 TRPC5Q9UL62 973 aaPredicted RBP17.28■□□□□ 0.36
LMNB1-203ENST00000460265 ITGB4P16144 1822 aa17.28■□□□□ 0.36
LMNB1-203ENST00000460265 ROBO1Q9Y6N7 1651 aa17.28■□□□□ 0.36
LMNB1-203ENST00000460265 SPATA1Q5VX52 437 aa17.27■□□□□ 0.36
LMNB1-203ENST00000460265 PACS2Q86VP3 889 aa17.27■□□□□ 0.36
LMNB1-203ENST00000460265 POLLQ9UGP5 575 aa17.27■□□□□ 0.36
LMNB1-203ENST00000460265 TOGARAM1Q9Y4F4 1720 aa17.27■□□□□ 0.36
LMNB1-203ENST00000460265 MYH2Q9UKX2 1941 aa17.27■□□□□ 0.36
LMNB1-203ENST00000460265 HLA-DOAP06340 250 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms