RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 SYDE2Q5VT97 1194 aa14.31□□□□□ -0.12
HDAC4-206ENST00000460235 CYP4F22Q6NT55 531 aa14.31□□□□□ -0.12
HDAC4-206ENST00000460235 TMTC3Q6ZXV5 915 aa14.31□□□□□ -0.12
HDAC4-206ENST00000460235 KCTD1Q719H9 257 aa14.31□□□□□ -0.12
HDAC4-206ENST00000460235 FAM177A1Q8N128 213 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-206ENST00000460235 ZNF713Q8N859 430 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-206ENST00000460235 SMCR8Q8TEV9 937 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-206ENST00000460235 INTS4Q96HW7 963 aaKnown RBP14.31□□□□□ -0.12
HDAC4-206ENST00000460235 MYL10Q9BUA6 226 aa14.31□□□□□ -0.12
HDAC4-206ENST00000460235 SENP2Q9HC62 589 aa14.31□□□□□ -0.12
HDAC4-206ENST00000460235 MAD2L2Q9UI95 211 aa14.31□□□□□ -0.12
HDAC4-206ENST00000460235 WDR33Q9C0J8 1336 aaKnown RBP14.31□□□□□ -0.12
HDAC4-206ENST00000460235 FAM155AB1AL88 458 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-206ENST00000460235 PDHXO00330 501 aa14.3□□□□□ -0.12
HDAC4-206ENST00000460235 OAZ1P54368 228 aa14.3□□□□□ -0.12
HDAC4-206ENST00000460235 KIF23Q02241 960 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-206ENST00000460235 TEX2Q8IWB9 1127 aa14.3□□□□□ -0.12
HDAC4-206ENST00000460235 CCDC144CPQ8IYA2 1237 aa14.3□□□□□ -0.12
HDAC4-206ENST00000460235 CCDC12Q8WUD4 166 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-206ENST00000460235 BRI3BPQ8WY22 251 aa14.3□□□□□ -0.12
HDAC4-206ENST00000460235 KIFC2Q96AC6 838 aa14.3□□□□□ -0.12
HDAC4-206ENST00000460235 BEGAINQ9BUH8 593 aa14.3□□□□□ -0.12
HDAC4-206ENST00000460235 RNF26Q9BY78 433 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-206ENST00000460235 ZFYVE28Q9HCC9 887 aa14.3□□□□□ -0.12
HDAC4-206ENST00000460235 PPP1R9AQ9ULJ8 1098 aa14.3□□□□□ -0.12
HDAC4-206ENST00000460235 HPS5Q9UPZ3 1129 aa14.3□□□□□ -0.12
HDAC4-206ENST00000460235 FRMPD2Q68DX3 1309 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-206ENST00000460235 DSG3P32926 999 aa14.29□□□□□ -0.12
HDAC4-206ENST00000460235 CCNA1P78396 465 aa14.29□□□□□ -0.12
HDAC4-206ENST00000460235 LBX2Q6XYB7 198 aa14.29□□□□□ -0.12
HDAC4-206ENST00000460235 IFNL1Q8IU54 200 aa14.29□□□□□ -0.12
HDAC4-206ENST00000460235 FAM184AQ8NB25 1140 aa14.29□□□□□ -0.12
HDAC4-206ENST00000460235 NUP88Q99567 741 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-206ENST00000460235 LARP6Q9BRS8 491 aaKnown RBP14.29□□□□□ -0.12
HDAC4-206ENST00000460235 MAF1Q9H063 256 aa14.29□□□□□ -0.12
HDAC4-206ENST00000460235 GLT8D2Q9H1C3 349 aa14.29□□□□□ -0.12
HDAC4-206ENST00000460235 RIOX1Q9H6W3 641 aa14.29□□□□□ -0.12
HDAC4-206ENST00000460235 SMC3Q9UQE7 1217 aa14.29□□□□□ -0.12
HDAC4-206ENST00000460235 PNMA6FA0A0J9YX94 578 aa14.28□□□□□ -0.12
HDAC4-206ENST00000460235 BTBD19C9JJ37 291 aa14.28□□□□□ -0.12
HDAC4-206ENST00000460235 PRPF3O43395 683 aaKnown RBP14.28□□□□□ -0.12
HDAC4-206ENST00000460235 DEXIO95424 95 aa14.28□□□□□ -0.12
HDAC4-206ENST00000460235 GOLGA8HP0CJ92 632 aa14.28□□□□□ -0.12
HDAC4-206ENST00000460235 RXRAP19793 462 aa14.28□□□□□ -0.12
HDAC4-206ENST00000460235 PDCP20941 246 aa14.28□□□□□ -0.12
HDAC4-206ENST00000460235 ADD1P35611 737 aaKnown RBP14.28□□□□□ -0.12
HDAC4-206ENST00000460235 MAP2K1Q02750 393 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-206ENST00000460235 SCRN1Q12765 414 aa14.28□□□□□ -0.12
HDAC4-206ENST00000460235 COL9A3Q14050 684 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-206ENST00000460235 TRIM29Q14134 588 aa14.28□□□□□ -0.12
HDAC4-206ENST00000460235 CCDC83Q8IWF9 413 aa14.28□□□□□ -0.12
HDAC4-206ENST00000460235 CCAR1Q8IX12 1150 aaKnown RBP14.28□□□□□ -0.12
HDAC4-206ENST00000460235 ADGRF4Q8IZF3 695 aa14.28□□□□□ -0.12
HDAC4-206ENST00000460235 ASCC2Q9H1I8 757 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-206ENST00000460235 STK36Q9NRP7 1315 aa14.28□□□□□ -0.12
HDAC4-206ENST00000460235 PRR12Q9ULL5 1215 aa14.28□□□□□ -0.12
HDAC4-206ENST00000460235 RABGAP1Q9Y3P9 1069 aa14.28□□□□□ -0.12
HDAC4-206ENST00000460235 PHIPQ8WWQ0 1821 aa14.27□□□□□ -0.12
HDAC4-206ENST00000460235 ZBTB5O15062 677 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 CA12O43570 354 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 FMNL1O95466 1100 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-206ENST00000460235 CDC27P30260 824 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 HERVK_113P62684 666 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 CUL4AQ13619 759 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 TAF1CQ15572 869 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-206ENST00000460235 TKFCQ3LXA3 575 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 TREML2Q5T2D2 321 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 GPAT2Q6NUI2 795 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-206ENST00000460235 STAG2Q8N3U4 1231 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 NECAB1Q8N987 351 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 RGS22Q8NE09 1264 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 CCDC148Q8NFR7 591 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 AMNQ9BXJ7 453 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 SLC26A6Q9BXS9 759 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 UBA5Q9GZZ9 404 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 CWC22Q9HCG8 908 aaKnown RBP14.27□□□□□ -0.13
HDAC4-206ENST00000460235 VAT1LQ9HCJ6 419 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 TSHZ2Q9NRE2 1034 aa14.27□□□□□ -0.13
HDAC4-206ENST00000460235 RBM19Q9Y4C8 960 aaKnown RBP14.27□□□□□ -0.13
HDAC4-206ENST00000460235 V9GY48 417 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-206ENST00000460235 VWA5AO00534 786 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 ATP2A1O14983 1001 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 SLC25A27O95847 323 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 SLC16A2P36021 539 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 VEGFBP49765 207 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 MOGSQ13724 837 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 ARHGEF6Q15052 776 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 KIAA1755Q5JYT7 1200 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 MCTP2Q6DN12 878 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 TTBK2Q6IQ55 1244 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 FBXO11Q86XK2 927 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 RAB11FIP4Q86YS3 637 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 SRBD1Q8N5C6 995 aaKnown RBP14.26□□□□□ -0.13
HDAC4-206ENST00000460235 SAMD3Q8N6K7 520 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 P2RX7Q99572 595 aaKnown RBP14.26□□□□□ -0.13
HDAC4-206ENST00000460235 RANBP17Q9H2T7 1088 aaKnown RBP14.26□□□□□ -0.13
HDAC4-206ENST00000460235 JMJD4Q9H9V9 463 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 SLC38A10Q9HBR0 1119 aa14.26□□□□□ -0.13
HDAC4-206ENST00000460235 NCOA5Q9HCD5 579 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms