RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 TCP11L1Q9NUJ3 509 aa19.05■□□□□ 0.64
COL7A1-203ENST00000459756 CTDP1Q9Y5B0 961 aaPredicted RBP19.05■□□□□ 0.64
COL7A1-203ENST00000459756 ZNF213O14771 459 aa19.04■□□□□ 0.64
COL7A1-203ENST00000459756 ATP2A1O14983 1001 aa19.04■□□□□ 0.64
COL7A1-203ENST00000459756 COBLO75128 1261 aa19.04■□□□□ 0.64
COL7A1-203ENST00000459756 IGHA2P01877 340 aa19.04■□□□□ 0.64
COL7A1-203ENST00000459756 SLC1A4P43007 532 aa19.04■□□□□ 0.64
COL7A1-203ENST00000459756 NT5C2P49902 561 aa19.04■□□□□ 0.64
COL7A1-203ENST00000459756 CHURC1Q8WUH1 139 aa19.04■□□□□ 0.64
COL7A1-203ENST00000459756 MMP19Q99542 508 aa19.04■□□□□ 0.64
COL7A1-203ENST00000459756 DSCC1Q9BVC3 393 aa19.04■□□□□ 0.64
COL7A1-203ENST00000459756 SLC38A10Q9HBR0 1119 aa19.04■□□□□ 0.64
COL7A1-203ENST00000459756 OGDHLQ9ULD0 1010 aa19.04■□□□□ 0.64
COL7A1-203ENST00000459756 LAMA4Q16363 1823 aa19.04■□□□□ 0.64
COL7A1-203ENST00000459756 TMEM232C9JQI7 657 aa19.03■□□□□ 0.64
COL7A1-203ENST00000459756 FDX1P10109 184 aa19.03■□□□□ 0.64
COL7A1-203ENST00000459756 MCCP23508 829 aa19.03■□□□□ 0.64
COL7A1-203ENST00000459756 CCND3P30281 292 aaPredicted RBP19.03■□□□□ 0.64
COL7A1-203ENST00000459756 STAT2P52630 851 aa19.03■□□□□ 0.64
COL7A1-203ENST00000459756 KCTD2Q14681 263 aa19.03■□□□□ 0.64
COL7A1-203ENST00000459756 SNRNP48Q6IEG0 339 aaKnown RBP19.03■□□□□ 0.64
COL7A1-203ENST00000459756 FAM160B2Q86V87 743 aa19.03■□□□□ 0.64
COL7A1-203ENST00000459756 TBC1D10CQ8IV04 446 aa19.03■□□□□ 0.64
COL7A1-203ENST00000459756 CTNNA3Q9UI47 895 aa19.03■□□□□ 0.64
COL7A1-203ENST00000459756 ISY1Q9ULR0 285 aaKnown RBP19.03■□□□□ 0.64
COL7A1-203ENST00000459756 ZNFX1Q9P2E3 1918 aaKnown RBP19.03■□□□□ 0.64
COL7A1-203ENST00000459756 PLA2G6O60733 806 aa19.02■□□□□ 0.64
COL7A1-203ENST00000459756 TOP1P11387 765 aaKnown RBP19.02■□□□□ 0.64
COL7A1-203ENST00000459756 CYP2C19P33261 490 aa19.02■□□□□ 0.64
COL7A1-203ENST00000459756 OAZ1P54368 228 aa19.02■□□□□ 0.64
COL7A1-203ENST00000459756 RCSD1Q6JBY9 416 aa19.02■□□□□ 0.64
COL7A1-203ENST00000459756 NECAB2Q7Z6G3 386 aa19.02■□□□□ 0.64
COL7A1-203ENST00000459756 ESR2Q92731 530 aa19.02■□□□□ 0.64
COL7A1-203ENST00000459756 RAD50Q92878 1312 aa19.01■□□□□ 0.63
COL7A1-203ENST00000459756 IKQ13123 557 aaPredicted RBP19.01■□□□□ 0.63
COL7A1-203ENST00000459756 IMMTQ16891 758 aaKnown RBP19.01■□□□□ 0.63
COL7A1-203ENST00000459756 LHX8Q68G74 356 aa19.01■□□□□ 0.63
COL7A1-203ENST00000459756 CPXCR1Q8N123 301 aa19.01■□□□□ 0.63
COL7A1-203ENST00000459756 RUFY2Q8WXA3 655 aa19.01■□□□□ 0.63
COL7A1-203ENST00000459756 DPF3Q92784 378 aa19.01■□□□□ 0.63
COL7A1-203ENST00000459756 PAWRQ96IZ0 340 aaKnown RBP19.01■□□□□ 0.63
COL7A1-203ENST00000459756 MAML3Q96JK9 1138 aa19.01■□□□□ 0.63
COL7A1-203ENST00000459756 TTC14Q96N46 770 aa19.01■□□□□ 0.63
COL7A1-203ENST00000459756 DIS3Q9Y2L1 958 aaKnown RBP19.01■□□□□ 0.63
COL7A1-203ENST00000459756 RIPK3Q9Y572 518 aa19.01■□□□□ 0.63
COL7A1-203ENST00000459756 MSCO60682 206 aa19■□□□□ 0.63
COL7A1-203ENST00000459756 DCAF4Q8WV16 495 aa19■□□□□ 0.63
COL7A1-203ENST00000459756 TMEM47Q9BQJ4 181 aa19■□□□□ 0.63
COL7A1-203ENST00000459756 RAVER2Q9HCJ3 691 aaKnown RBP19■□□□□ 0.63
COL7A1-203ENST00000459756 NEDD4P46934 1319 aa19■□□□□ 0.63
COL7A1-203ENST00000459756 PGK2P07205 417 aa18.99■□□□□ 0.63
COL7A1-203ENST00000459756 CYBAP13498 195 aa18.99■□□□□ 0.63
COL7A1-203ENST00000459756 CHMLP26374 656 aa18.99■□□□□ 0.63
COL7A1-203ENST00000459756 CNGA1P29973 690 aa18.99■□□□□ 0.63
COL7A1-203ENST00000459756 KCTD1Q719H9 257 aa18.99■□□□□ 0.63
COL7A1-203ENST00000459756 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.99■□□□□ 0.63
COL7A1-203ENST00000459756 DIS3LQ8TF46 1054 aaKnown RBP18.99■□□□□ 0.63
COL7A1-203ENST00000459756 CHMP4CQ96CF2 233 aa18.99■□□□□ 0.63
COL7A1-203ENST00000459756 FBXO40Q9UH90 709 aa18.99■□□□□ 0.63
COL7A1-203ENST00000459756 DDX20Q9UHI6 824 aaKnown RBP18.99■□□□□ 0.63
COL7A1-203ENST00000459756 PLXNA1Q9UIW2 1896 aa18.99■□□□□ 0.63
COL7A1-203ENST00000459756 SLC4A3P48751 1232 aa18.98■□□□□ 0.63
COL7A1-203ENST00000459756 MNX1P50219 401 aaPredicted RBP18.98■□□□□ 0.63
COL7A1-203ENST00000459756 CCDC96Q2M329 555 aa18.98■□□□□ 0.63
COL7A1-203ENST00000459756 ZNF792Q3KQV3 632 aa18.98■□□□□ 0.63
COL7A1-203ENST00000459756 CCDC178Q5BJE1 867 aa18.98■□□□□ 0.63
COL7A1-203ENST00000459756 TRPV1Q8NER1 839 aa18.98■□□□□ 0.63
COL7A1-203ENST00000459756 CHST13Q8NET6 341 aa18.98■□□□□ 0.63
COL7A1-203ENST00000459756 IL25Q9H293 177 aa18.98■□□□□ 0.63
COL7A1-203ENST00000459756 MTMR7Q9Y216 660 aa18.98■□□□□ 0.63
COL7A1-203ENST00000459756 IQCA1Q86XH1 822 aa18.97■□□□□ 0.63
COL7A1-203ENST00000459756 DDX11Q96FC9 970 aa18.97■□□□□ 0.63
COL7A1-203ENST00000459756 C11orf49Q9H6J7 331 aa18.97■□□□□ 0.63
COL7A1-203ENST00000459756 NRBP1Q9UHY1 535 aa18.97■□□□□ 0.63
COL7A1-203ENST00000459756 PRR12Q9ULL5 1215 aa18.97■□□□□ 0.63
COL7A1-203ENST00000459756 NR2E3Q9Y5X4 410 aa18.97■□□□□ 0.63
COL7A1-203ENST00000459756 FRMPD3Q5JV73 1810 aa18.97■□□□□ 0.63
COL7A1-203ENST00000459756 CEP290O15078 2479 aa18.96■□□□□ 0.63
COL7A1-203ENST00000459756 DNAJC25-GNG10A0A024R161 153 aa18.96■□□□□ 0.63
COL7A1-203ENST00000459756 H0YGN5 161 aa18.96■□□□□ 0.63
COL7A1-203ENST00000459756 KDM4AO75164 1064 aa18.96■□□□□ 0.63
COL7A1-203ENST00000459756 CENPQQ7L2Z9 268 aaPredicted RBP18.96■□□□□ 0.63
COL7A1-203ENST00000459756 RASGRP2Q7LDG7 609 aa18.96■□□□□ 0.63
COL7A1-203ENST00000459756 DGKHQ86XP1 1220 aa18.96■□□□□ 0.63
COL7A1-203ENST00000459756 MSL3Q8N5Y2 521 aaKnown RBP18.96■□□□□ 0.63
COL7A1-203ENST00000459756 TINF2Q9BSI4 451 aa18.96■□□□□ 0.63
COL7A1-203ENST00000459756 KRT23Q9C075 422 aa18.96■□□□□ 0.63
COL7A1-203ENST00000459756 CNNM2Q9H8M5 875 aa18.96■□□□□ 0.63
COL7A1-203ENST00000459756 ZNF536O15090 1300 aa18.96■□□□□ 0.63
COL7A1-203ENST00000459756 B4E1Z4 1266 aa18.95■□□□□ 0.62
COL7A1-203ENST00000459756 SEPT4O43236 478 aa18.95■□□□□ 0.62
COL7A1-203ENST00000459756 EVI5O60447 810 aa18.95■□□□□ 0.62
COL7A1-203ENST00000459756 TKFCQ3LXA3 575 aa18.95■□□□□ 0.62
COL7A1-203ENST00000459756 BTNL9Q6UXG8 535 aa18.95■□□□□ 0.62
COL7A1-203ENST00000459756 ANKRD35Q8N283 1001 aa18.95■□□□□ 0.62
COL7A1-203ENST00000459756 PDHBP11177 359 aa18.94■□□□□ 0.62
COL7A1-203ENST00000459756 PRAMEF19Q5SWL8 479 aa18.94■□□□□ 0.62
COL7A1-203ENST00000459756 ZNF467Q7Z7K2 595 aaPredicted RBP18.94■□□□□ 0.62
COL7A1-203ENST00000459756 ANKS1AQ92625 1134 aa18.94■□□□□ 0.62
COL7A1-203ENST00000459756 AGBL1Q96MI9 1066 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms