RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 MTMR7Q9Y216 660 aa18.96■□□□□ 0.63
CD28-203ENST00000458610 E7EWF7 191 aa18.95■□□□□ 0.62
CD28-203ENST00000458610 FCER1AP12319 257 aa18.95■□□□□ 0.62
CD28-203ENST00000458610 CAPN2P17655 700 aa18.95■□□□□ 0.62
CD28-203ENST00000458610 KCTD1Q719H9 257 aa18.95■□□□□ 0.62
CD28-203ENST00000458610 SLC38A10Q9HBR0 1119 aa18.95■□□□□ 0.62
CD28-203ENST00000458610 PNMA2Q9UL42 364 aa18.95■□□□□ 0.62
CD28-203ENST00000458610 HMGCRP04035 888 aa18.94■□□□□ 0.62
CD28-203ENST00000458610 GRB14Q14449 540 aa18.94■□□□□ 0.62
CD28-203ENST00000458610 KCTD2Q14681 263 aa18.94■□□□□ 0.62
CD28-203ENST00000458610 GPATCH4Q5T3I0 446 aaKnown RBP18.94■□□□□ 0.62
CD28-203ENST00000458610 IFIT1BQ5T764 474 aaKnown RBP18.94■□□□□ 0.62
CD28-203ENST00000458610 DPP9Q86TI2 863 aa18.94■□□□□ 0.62
CD28-203ENST00000458610 CPXCR1Q8N123 301 aa18.94■□□□□ 0.62
CD28-203ENST00000458610 REPS2Q8NFH8 660 aa18.94■□□□□ 0.62
CD28-203ENST00000458610 USP6NLQ92738 828 aa18.94■□□□□ 0.62
CD28-203ENST00000458610 APBA2Q99767 749 aa18.94■□□□□ 0.62
CD28-203ENST00000458610 ZNF214Q9UL59 606 aaPredicted RBP18.94■□□□□ 0.62
CD28-203ENST00000458610 MGAMO43451 1857 aa18.94■□□□□ 0.62
CD28-203ENST00000458610 TNKSO95271 1327 aa18.94■□□□□ 0.62
CD28-203ENST00000458610 PDHBP11177 359 aa18.93■□□□□ 0.62
CD28-203ENST00000458610 ELNP15502 786 aa18.93■□□□□ 0.62
CD28-203ENST00000458610 SOX10P56693 466 aa18.93■□□□□ 0.62
CD28-203ENST00000458610 NECTIN1Q15223 517 aa18.93■□□□□ 0.62
CD28-203ENST00000458610 SNRNP48Q6IEG0 339 aaKnown RBP18.93■□□□□ 0.62
CD28-203ENST00000458610 BTNL9Q6UXG8 535 aa18.93■□□□□ 0.62
CD28-203ENST00000458610 ENAHQ8N8S7 591 aaPredicted RBP18.93■□□□□ 0.62
CD28-203ENST00000458610 PNMA1Q8ND90 353 aa18.93■□□□□ 0.62
CD28-203ENST00000458610 NKX2-3Q8TAU0 364 aa18.93■□□□□ 0.62
CD28-203ENST00000458610 MTA3Q9BTC8 594 aa18.93■□□□□ 0.62
CD28-203ENST00000458610 FBXO40Q9UH90 709 aa18.93■□□□□ 0.62
CD28-203ENST00000458610 MYH4Q9Y623 1939 aa18.93■□□□□ 0.62
CD28-203ENST00000458610 IFIT3O14879 490 aaKnown RBP18.92■□□□□ 0.62
CD28-203ENST00000458610 SLC27A2O14975 620 aa18.92■□□□□ 0.62
CD28-203ENST00000458610 REC8O95072 547 aa18.92■□□□□ 0.62
CD28-203ENST00000458610 INHAP05111 366 aa18.92■□□□□ 0.62
CD28-203ENST00000458610 HOXC6P09630 235 aa18.92■□□□□ 0.62
CD28-203ENST00000458610 SNHG28P0DPA3 235 aa18.92■□□□□ 0.62
CD28-203ENST00000458610 ZKSCAN1P17029 563 aaPredicted RBP18.92■□□□□ 0.62
CD28-203ENST00000458610 RGS19P49795 217 aa18.92■□□□□ 0.62
CD28-203ENST00000458610 TKFCQ3LXA3 575 aa18.92■□□□□ 0.62
CD28-203ENST00000458610 CREB3L3Q68CJ9 461 aa18.92■□□□□ 0.62
CD28-203ENST00000458610 CHST13Q8NET6 341 aa18.92■□□□□ 0.62
CD28-203ENST00000458610 CHMP4CQ96CF2 233 aa18.92■□□□□ 0.62
CD28-203ENST00000458610 RNF208Q9H0X6 261 aa18.92■□□□□ 0.62
CD28-203ENST00000458610 PRR12Q9ULL5 1215 aa18.92■□□□□ 0.62
CD28-203ENST00000458610 ZSWIM8A7E2V4 1837 aa18.91■□□□□ 0.62
CD28-203ENST00000458610 ADORA2AP29274 412 aa18.91■□□□□ 0.62
CD28-203ENST00000458610 SLC4A3P48751 1232 aa18.91■□□□□ 0.62
CD28-203ENST00000458610 ZNF543Q08ER8 600 aa18.91■□□□□ 0.62
CD28-203ENST00000458610 SYDE2Q5VT97 1194 aa18.91■□□□□ 0.62
CD28-203ENST00000458610 MFSD14CQ5VZR4 134 aa18.91■□□□□ 0.62
CD28-203ENST00000458610 CYB5R4Q7L1T6 521 aa18.91■□□□□ 0.62
CD28-203ENST00000458610 TMTC2Q8N394 836 aa18.91■□□□□ 0.62
CD28-203ENST00000458610 MMP19Q99542 508 aa18.91■□□□□ 0.62
CD28-203ENST00000458610 RAVER2Q9HCJ3 691 aaKnown RBP18.91■□□□□ 0.62
CD28-203ENST00000458610 GPCPD1Q9NPB8 672 aa18.91■□□□□ 0.62
CD28-203ENST00000458610 LAMA4Q16363 1823 aa18.9■□□□□ 0.62
CD28-203ENST00000458610 MYCP01106 439 aaPredicted RBP18.9■□□□□ 0.62
CD28-203ENST00000458610 CCL5P13501 91 aa18.9■□□□□ 0.62
CD28-203ENST00000458610 MCM5P33992 734 aa18.9■□□□□ 0.62
CD28-203ENST00000458610 KRT32Q14532 448 aa18.9■□□□□ 0.62
CD28-203ENST00000458610 WTAPQ15007 396 aa18.9■□□□□ 0.62
CD28-203ENST00000458610 ASPRV1Q53RT3 343 aa18.9■□□□□ 0.62
CD28-203ENST00000458610 DDX11Q96FC9 970 aa18.9■□□□□ 0.62
CD28-203ENST00000458610 HMX1Q9NP08 348 aaPredicted RBP18.9■□□□□ 0.62
CD28-203ENST00000458610 RLFQ13129 1914 aa18.9■□□□□ 0.62
CD28-203ENST00000458610 EIF5BO60841 1220 aaKnown RBP18.89■□□□□ 0.61
CD28-203ENST00000458610 GJB1P08034 283 aa18.89■□□□□ 0.61
CD28-203ENST00000458610 PARP1P09874 1014 aaKnown RBP18.89■□□□□ 0.61
CD28-203ENST00000458610 SEC23AQ15436 765 aa18.89■□□□□ 0.61
CD28-203ENST00000458610 TRIB2Q92519 343 aa18.89■□□□□ 0.61
CD28-203ENST00000458610 DIS3Q9Y2L1 958 aaKnown RBP18.89■□□□□ 0.61
CD28-203ENST00000458610 FRMPD2Q68DX3 1309 aaPredicted RBP18.89■□□□□ 0.61
CD28-203ENST00000458610 RPTORQ8N122 1335 aa18.89■□□□□ 0.61
CD28-203ENST00000458610 EPB41L2O43491 1005 aaKnown RBP18.88■□□□□ 0.61
CD28-203ENST00000458610 SLC16A2P36021 539 aa18.88■□□□□ 0.61
CD28-203ENST00000458610 MTFR1Q15390 333 aa18.88■□□□□ 0.61
CD28-203ENST00000458610 TMEM67Q5HYA8 995 aa18.88■□□□□ 0.61
CD28-203ENST00000458610 OLFML2BQ68BL8 750 aa18.88■□□□□ 0.61
CD28-203ENST00000458610 TTBK2Q6IQ55 1244 aa18.88■□□□□ 0.61
CD28-203ENST00000458610 STOX1Q6ZVD7 989 aa18.88■□□□□ 0.61
CD28-203ENST00000458610 MB21D2Q8IYB1 491 aaPredicted RBP18.88■□□□□ 0.61
CD28-203ENST00000458610 TMEM87BQ96K49 555 aa18.88■□□□□ 0.61
CD28-203ENST00000458610 A0A0G2JMZ2 1700 aa18.87■□□□□ 0.61
CD28-203ENST00000458610 MLLT1Q03111 559 aaPredicted RBP18.87■□□□□ 0.61
CD28-203ENST00000458610 TSGA10IPQ3SY00 556 aa18.87■□□□□ 0.61
CD28-203ENST00000458610 CCDC174Q6PII3 467 aa18.87■□□□□ 0.61
CD28-203ENST00000458610 CATIPQ7Z7H3 387 aa18.87■□□□□ 0.61
CD28-203ENST00000458610 ANKRD35Q8N283 1001 aa18.87■□□□□ 0.61
CD28-203ENST00000458610 UNC93B1Q9H1C4 597 aa18.87■□□□□ 0.61
CD28-203ENST00000458610 RANBP17Q9H2T7 1088 aaKnown RBP18.87■□□□□ 0.61
CD28-203ENST00000458610 ACAD9Q9H845 621 aa18.87■□□□□ 0.61
CD28-203ENST00000458610 RIPK3Q9Y572 518 aa18.87■□□□□ 0.61
CD28-203ENST00000458610 DOCK3Q8IZD9 2030 aa18.86■□□□□ 0.61
CD28-203ENST00000458610 PRC1O43663 620 aa18.86■□□□□ 0.61
CD28-203ENST00000458610 COBLO75128 1261 aa18.86■□□□□ 0.61
CD28-203ENST00000458610 ICAM1P05362 532 aa18.86■□□□□ 0.61
CD28-203ENST00000458610 HMGB1P09429 215 aaKnown RBP18.86■□□□□ 0.61
CD28-203ENST00000458610 GJA8P48165 433 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms