RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 ANKRD1Q15327 319 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 RTN1Q16799 776 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 SLC35G1Q2M3R5 365 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 POTEEQ6S8J3 1075 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 CTU1Q7Z7A3 348 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 PROCA1Q8NCQ7 364 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 CTCFLQ8NI51 663 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 DCAF4Q8WV16 495 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 LPAR1Q92633 364 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 ATG4CQ96DT6 458 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 GMCL1Q96IK5 515 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 ASCC2Q9H1I8 757 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 R3HDMLQ9H3Y0 253 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 LIMCH1Q9UPQ0 1083 aa10.12□□□□□ -0.79
CLTCL1-204ENST00000458188 TBC1D8O95759 1140 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 OSBPP22059 807 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 IRX3P78415 501 aaPredicted RBP10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 SREBF2Q12772 1141 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 COG2Q14746 738 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 PKN2Q16513 984 aaKnown RBP10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 CCDC174Q6PII3 467 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 ANKRD23Q86SG2 305 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 CCDC83Q8IWF9 413 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 ADGRF4Q8IZF3 695 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 FBXL16Q8N461 479 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 SRBD1Q8N5C6 995 aaKnown RBP10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 ZNF274Q96GC6 653 aaPredicted RBP10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 PAGR1Q9BTK6 254 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 SLKQ9H2G2 1235 aaPredicted RBP10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 TSHZ2Q9NRE2 1034 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 FOXD4L1Q9NU39 408 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 CPA4Q9UI42 421 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 PRR12Q9ULL5 1215 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 OTOFQ9HC10 1997 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 LAMA4Q16363 1823 aa10.11□□□□□ -0.79
CLTCL1-204ENST00000458188 CYTH3O43739 400 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 PFKFB2O60825 505 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 CALM1P0DP23 149 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 CALM2P0DP24 149 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 CALM3P0DP25 149 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 HOXA7P31268 230 aaPredicted RBP10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 DSG3P32926 999 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 STAT2P52630 851 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 EVCP57679 992 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 INHBEP58166 350 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 ST3GAL1Q11201 340 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 TAF1CQ15572 869 aaPredicted RBP10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 ASPRV1Q53RT3 343 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 SYDE2Q5VT97 1194 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 HOMER1Q86YM7 354 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 CPXCR1Q8N123 301 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 SPRYD3Q8NCJ5 442 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 PHKBQ93100 1093 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 SLF1Q9BQI6 1058 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 RAVER2Q9HCJ3 691 aaKnown RBP10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 RNF186Q9NXI6 227 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 FEM1BQ9UK73 627 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 SYNPO2Q9UMS6 1093 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 DOCK1Q14185 1865 aa10.1□□□□□ -0.79
CLTCL1-204ENST00000458188 SPDYE16A6NNV3 312 aaPredicted RBP10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 KIF5BP33176 963 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 HERVK_113P62684 666 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 PABPC4Q13310 644 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 CRHR2Q13324 411 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 PLS1Q14651 629 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 Q3C1V9 767 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 GPATCH4Q5T3I0 446 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 OTUD7BQ6GQQ9 843 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 TMTC3Q6ZXV5 915 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 ANKRD13CQ8N6S4 541 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 PRPF38AQ8NAV1 312 aaKnown RBP10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 SMCR8Q8TEV9 937 aaPredicted RBP10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 CHURC1Q8WUH1 139 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 TMX3Q96JJ7 454 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 PIGSQ96S52 555 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 JMJD4Q9H9V9 463 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 TXNRD2Q9NNW7 524 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 HOXC10Q9NYD6 342 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 BTBD7Q9P203 1132 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 RBPJLQ9UBG7 517 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 PPP1R9AQ9ULJ8 1098 aa10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 V9GY48 417 aaPredicted RBP10.09□□□□□ -0.79
CLTCL1-204ENST00000458188 VWA5AO00534 786 aa10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 CPLX1O14810 134 aa10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 JAK2O60674 1132 aa10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 ZBED4O75132 1171 aa10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 CNMDO75829 334 aa10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 CTDNEP1O95476 244 aa10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 FOSBP53539 338 aa10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 TMEM132BQ14DG7 1078 aa10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 CDC37Q16543 378 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 BTNL9Q6UXG8 535 aa10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 FAM160B2Q86V87 743 aa10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 GTF3C6Q969F1 213 aa10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 DDX11Q96FC9 970 aa10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 ZSCAN31Q96LW9 406 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 AGBL1Q96MI9 1066 aa10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 SLC26A6Q9BXS9 759 aa10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 ZFYVE28Q9HCC9 887 aa10.08□□□□□ -0.8
CLTCL1-204ENST00000458188 RBM28Q9NW13 759 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms