RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 TINF2Q9BSI4 451 aa18.18■□□□□ 0.5
CROCCP4-201ENST00000457096 NACAP1Q9BZK3 213 aa18.18■□□□□ 0.5
CROCCP4-201ENST00000457096 SLC5A4Q9NY91 659 aa18.18■□□□□ 0.5
CROCCP4-201ENST00000457096 ISY1Q9ULR0 285 aaKnown RBP18.18■□□□□ 0.5
CROCCP4-201ENST00000457096 ATP11BQ9Y2G3 1177 aa18.18■□□□□ 0.5
CROCCP4-201ENST00000457096 ZNFX1Q9P2E3 1918 aaKnown RBP18.17■□□□□ 0.5
CROCCP4-201ENST00000457096 MYH4Q9Y623 1939 aa18.17■□□□□ 0.5
CROCCP4-201ENST00000457096 A0A1W2PPC1 479 aa18.17■□□□□ 0.5
CROCCP4-201ENST00000457096 TTLL1O95922 423 aa18.17■□□□□ 0.5
CROCCP4-201ENST00000457096 PGK1P00558 417 aa18.17■□□□□ 0.5
CROCCP4-201ENST00000457096 IRX5P78411 483 aaPredicted RBP18.17■□□□□ 0.5
CROCCP4-201ENST00000457096 LRRC41Q15345 812 aa18.17■□□□□ 0.5
CROCCP4-201ENST00000457096 LRRFIP1Q32MZ4 808 aaKnown RBP18.17■□□□□ 0.5
CROCCP4-201ENST00000457096 MKL1Q969V6 931 aa18.17■□□□□ 0.5
CROCCP4-201ENST00000457096 TEX13BQ9BXU2 312 aa18.17■□□□□ 0.5
CROCCP4-201ENST00000457096 LNPKQ9C0E8 428 aa18.17■□□□□ 0.5
CROCCP4-201ENST00000457096 MTMR7Q9Y216 660 aa18.17■□□□□ 0.5
CROCCP4-201ENST00000457096 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.17■□□□□ 0.5
CROCCP4-201ENST00000457096 A0A0D9SFI3 127 aa18.16■□□□□ 0.5
CROCCP4-201ENST00000457096 ZNF865P0CJ78 1059 aaPredicted RBP18.16■□□□□ 0.5
CROCCP4-201ENST00000457096 PDE4BQ07343 736 aa18.16■□□□□ 0.5
CROCCP4-201ENST00000457096 B4GALNT3Q6L9W6 998 aa18.16■□□□□ 0.5
CROCCP4-201ENST00000457096 SLC39A5Q6ZMH5 540 aa18.16■□□□□ 0.5
CROCCP4-201ENST00000457096 Q7L0L9 218 aa18.16■□□□□ 0.5
CROCCP4-201ENST00000457096 PRPF38AQ8NAV1 312 aaKnown RBP18.16■□□□□ 0.5
CROCCP4-201ENST00000457096 IL17RBQ9NRM6 502 aa18.16■□□□□ 0.5
CROCCP4-201ENST00000457096 HOMER2Q9NSB8 354 aa18.16■□□□□ 0.5
CROCCP4-201ENST00000457096 PLIN4Q96Q06 1357 aa18.16■□□□□ 0.5
CROCCP4-201ENST00000457096 TMEM232C9JQI7 657 aa18.15■□□□□ 0.5
CROCCP4-201ENST00000457096 KBTBD13C9JR72 458 aa18.15■□□□□ 0.5
CROCCP4-201ENST00000457096 ZBED4O75132 1171 aa18.15■□□□□ 0.5
CROCCP4-201ENST00000457096 SNAI1O95863 264 aaPredicted RBP18.15■□□□□ 0.5
CROCCP4-201ENST00000457096 HDAC1Q13547 482 aaPredicted RBP18.15■□□□□ 0.5
CROCCP4-201ENST00000457096 TRIM60Q495X7 471 aa18.15■□□□□ 0.5
CROCCP4-201ENST00000457096 KCTD1Q719H9 257 aa18.15■□□□□ 0.5
CROCCP4-201ENST00000457096 TDHQ8IZJ6 230 aa18.15■□□□□ 0.5
CROCCP4-201ENST00000457096 ARRDC4Q8NCT1 418 aa18.15■□□□□ 0.5
CROCCP4-201ENST00000457096 FGD4Q96M96 766 aa18.15■□□□□ 0.5
CROCCP4-201ENST00000457096 SLC38A10Q9HBR0 1119 aa18.15■□□□□ 0.5
CROCCP4-201ENST00000457096 ZNF287Q9HBT7 754 aa18.15■□□□□ 0.5
CROCCP4-201ENST00000457096 XPNPEP3Q9NQH7 507 aa18.15■□□□□ 0.5
CROCCP4-201ENST00000457096 ZBTB47Q9UFB7 747 aaPredicted RBP18.15■□□□□ 0.5
CROCCP4-201ENST00000457096 DDX49Q9Y6V7 483 aaKnown RBP18.15■□□□□ 0.5
CROCCP4-201ENST00000457096 PLXNA1Q9UIW2 1896 aa18.14■□□□□ 0.49
CROCCP4-201ENST00000457096 DNAJC25-GNG10A0A024R161 153 aa18.14■□□□□ 0.49
CROCCP4-201ENST00000457096 IGHDP01880 384 aa18.14■□□□□ 0.49
CROCCP4-201ENST00000457096 BMP3P12645 472 aa18.14■□□□□ 0.49
CROCCP4-201ENST00000457096 MCCP23508 829 aa18.14■□□□□ 0.49
CROCCP4-201ENST00000457096 SH3RF1Q7Z6J0 888 aa18.14■□□□□ 0.49
CROCCP4-201ENST00000457096 ZNF589Q86UQ0 364 aaPredicted RBP18.14■□□□□ 0.49
CROCCP4-201ENST00000457096 GMCL1P1Q8NEA9 526 aa18.14■□□□□ 0.49
CROCCP4-201ENST00000457096 EVI5LQ96CN4 794 aa18.14■□□□□ 0.49
CROCCP4-201ENST00000457096 DDX11Q96FC9 970 aa18.14■□□□□ 0.49
CROCCP4-201ENST00000457096 PRDM5Q9NQX1 630 aaPredicted RBP18.14■□□□□ 0.49
CROCCP4-201ENST00000457096 FEM1BQ9UK73 627 aa18.14■□□□□ 0.49
CROCCP4-201ENST00000457096 STX8Q9UNK0 236 aa18.14■□□□□ 0.49
CROCCP4-201ENST00000457096 CTDP1Q9Y5B0 961 aaPredicted RBP18.14■□□□□ 0.49
CROCCP4-201ENST00000457096 TSPY2A6NKD2 308 aa18.13■□□□□ 0.49
CROCCP4-201ENST00000457096 SLC3A2P08195 630 aaKnown RBP18.13■□□□□ 0.49
CROCCP4-201ENST00000457096 NMIQ13287 307 aaPredicted RBP18.13■□□□□ 0.49
CROCCP4-201ENST00000457096 EXOC6Q8TAG9 804 aa18.13■□□□□ 0.49
CROCCP4-201ENST00000457096 AGBL1Q96MI9 1066 aa18.13■□□□□ 0.49
CROCCP4-201ENST00000457096 ZHX1Q9UKY1 873 aaPredicted RBP18.13■□□□□ 0.49
CROCCP4-201ENST00000457096 SMCHD1A6NHR9 2005 aa18.12■□□□□ 0.49
CROCCP4-201ENST00000457096 MYADML2A6NDP7 307 aa18.12■□□□□ 0.49
CROCCP4-201ENST00000457096 ADCY6O43306 1168 aa18.12■□□□□ 0.49
CROCCP4-201ENST00000457096 RANBP6O60518 1105 aaKnown RBP18.12■□□□□ 0.49
CROCCP4-201ENST00000457096 RARBP10826 455 aa18.12■□□□□ 0.49
CROCCP4-201ENST00000457096 HAND2P61296 217 aa18.12■□□□□ 0.49
CROCCP4-201ENST00000457096 CNTN2Q02246 1040 aa18.12■□□□□ 0.49
CROCCP4-201ENST00000457096 IKQ13123 557 aaPredicted RBP18.12■□□□□ 0.49
CROCCP4-201ENST00000457096 DIS3Q9Y2L1 958 aaKnown RBP18.12■□□□□ 0.49
CROCCP4-201ENST00000457096 TRIM43BA6NCK2 446 aa18.11■□□□□ 0.49
CROCCP4-201ENST00000457096 TRIM6-TRIM34B2RNG4 842 aa18.11■□□□□ 0.49
CROCCP4-201ENST00000457096 ATP2A1O14983 1001 aa18.11■□□□□ 0.49
CROCCP4-201ENST00000457096 FGAP02671 866 aa18.11■□□□□ 0.49
CROCCP4-201ENST00000457096 PTGS1P23219 599 aa18.11■□□□□ 0.49
CROCCP4-201ENST00000457096 COPB2P35606 906 aa18.11■□□□□ 0.49
CROCCP4-201ENST00000457096 SLC1A4P43007 532 aa18.11■□□□□ 0.49
CROCCP4-201ENST00000457096 RRP12Q5JTH9 1297 aaKnown RBP18.11■□□□□ 0.49
CROCCP4-201ENST00000457096 CCDC174Q6PII3 467 aa18.11■□□□□ 0.49
CROCCP4-201ENST00000457096 ANKRD35Q8N283 1001 aa18.11■□□□□ 0.49
CROCCP4-201ENST00000457096 RILPL2Q969X0 211 aa18.11■□□□□ 0.49
CROCCP4-201ENST00000457096 TRIM43Q96BQ3 446 aaPredicted RBP18.11■□□□□ 0.49
CROCCP4-201ENST00000457096 TOMM22Q9NS69 142 aa18.11■□□□□ 0.49
CROCCP4-201ENST00000457096 CNPY2Q9Y2B0 182 aa18.11■□□□□ 0.49
CROCCP4-201ENST00000457096 ZNF536O15090 1300 aa18.11■□□□□ 0.49
CROCCP4-201ENST00000457096 AKR1A1P14550 325 aa18.1■□□□□ 0.49
CROCCP4-201ENST00000457096 ITGB8P26012 769 aa18.1■□□□□ 0.49
CROCCP4-201ENST00000457096 LRIT3Q3SXY7 679 aa18.1■□□□□ 0.49
CROCCP4-201ENST00000457096 TTBK2Q6IQ55 1244 aa18.1■□□□□ 0.49
CROCCP4-201ENST00000457096 DEFB123Q8N688 67 aa18.1■□□□□ 0.49
CROCCP4-201ENST00000457096 LBHD1Q9BQE6 289 aaPredicted RBP18.1■□□□□ 0.49
CROCCP4-201ENST00000457096 PDLIM7Q9NR12 457 aa18.1■□□□□ 0.49
CROCCP4-201ENST00000457096 HELLSQ9NRZ9 838 aa18.1■□□□□ 0.49
CROCCP4-201ENST00000457096 ANAPC4Q9UJX5 808 aa18.1■□□□□ 0.49
CROCCP4-201ENST00000457096 SYNRGQ9UMZ2 1314 aa18.09■□□□□ 0.49
CROCCP4-201ENST00000457096 A0A1W2PQ45 241 aaPredicted RBP18.09■□□□□ 0.49
CROCCP4-201ENST00000457096 A0A1W2PQY0 241 aa18.09■□□□□ 0.49
CROCCP4-201ENST00000457096 ADAMTS4O75173 837 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms