RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 EXOSC10Q01780 885 aaKnown RBP9.31□□□□□ -0.92
SMCO1-202ENST00000452776 POSTNQ15063 836 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 CDC37Q16543 378 aaPredicted RBP9.31□□□□□ -0.92
SMCO1-202ENST00000452776 ZMYM1Q5SVZ6 1142 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 CCDC122Q5T0U0 273 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 CC2D2BQ6DHV5 1058 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 WAPLQ7Z5K2 1190 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 ATL2Q8NHH9 583 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 SMCR8Q8TEV9 937 aaPredicted RBP9.31□□□□□ -0.92
SMCO1-202ENST00000452776 TEKT4Q8WW24 435 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 IQCDQ96DY2 449 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 FAM227BQ96M60 508 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 GDAP1L1Q96MZ0 367 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 VCX3BQ9H321 246 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 VCX3AQ9NNX9 186 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 SCUBE2Q9NQ36 999 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 WDR35Q9P2L0 1181 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 MAN1B1Q9UKM7 699 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 ITGB1BP2Q9UKP3 347 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 CEP131Q9UPN4 1083 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 LEMD3Q9Y2U8 911 aa9.31□□□□□ -0.92
SMCO1-202ENST00000452776 GPR75-ASB3A0A0A6YYF3 556 aa9.3□□□□□ -0.92
SMCO1-202ENST00000452776 USO1O60763 962 aaKnown RBP9.3□□□□□ -0.92
SMCO1-202ENST00000452776 TACC1O75410 805 aa9.3□□□□□ -0.92
SMCO1-202ENST00000452776 LACTBP83111 547 aaPredicted RBP9.3□□□□□ -0.92
SMCO1-202ENST00000452776 DPY19L2Q6NUT2 758 aa9.3□□□□□ -0.92
SMCO1-202ENST00000452776 CDAN1Q8IWY9 1227 aa9.3□□□□□ -0.92
SMCO1-202ENST00000452776 ACRBPQ8NEB7 543 aa9.3□□□□□ -0.92
SMCO1-202ENST00000452776 CPLX3Q8WVH0 158 aa9.3□□□□□ -0.92
SMCO1-202ENST00000452776 LRRC45Q96CN5 670 aa9.3□□□□□ -0.92
SMCO1-202ENST00000452776 TCEANC2Q96MN5 208 aa9.3□□□□□ -0.92
SMCO1-202ENST00000452776 NUP88Q99567 741 aaPredicted RBP9.3□□□□□ -0.92
SMCO1-202ENST00000452776 NDST4Q9H3R1 872 aa9.3□□□□□ -0.92
SMCO1-202ENST00000452776 TAF1DQ9H5J8 278 aaPredicted RBP9.3□□□□□ -0.92
SMCO1-202ENST00000452776 TMBIM4Q9HC24 238 aa9.3□□□□□ -0.92
SMCO1-202ENST00000452776 PPANQ9NQ55 473 aaKnown RBP9.3□□□□□ -0.92
SMCO1-202ENST00000452776 LIMA1Q9UHB6 759 aaKnown RBP9.3□□□□□ -0.92
SMCO1-202ENST00000452776 LRRC42Q9Y546 428 aa9.3□□□□□ -0.92
SMCO1-202ENST00000452776 ASB3Q9Y575 518 aa9.3□□□□□ -0.92
SMCO1-202ENST00000452776 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.3□□□□□ -0.92
SMCO1-202ENST00000452776 KIF20BQ96Q89 1820 aa9.3□□□□□ -0.92
SMCO1-202ENST00000452776 ORC4O43929 436 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 ATP1A1P05023 1023 aaKnown RBP9.29□□□□□ -0.92
SMCO1-202ENST00000452776 ATP2A2P16615 1042 aaKnown RBP9.29□□□□□ -0.92
SMCO1-202ENST00000452776 YY1P25490 414 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 PDIA3P30101 505 aaKnown RBP9.29□□□□□ -0.92
SMCO1-202ENST00000452776 PSMC4P43686 418 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 SEC24CP53992 1094 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 DEUP1Q05D60 604 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 MTMR3Q13615 1198 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 CCDC178Q5BJE1 867 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 CDKAL1Q5VV42 579 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 LCA5Q86VQ0 697 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 METTL16Q86W50 562 aaKnown RBP9.29□□□□□ -0.92
SMCO1-202ENST00000452776 KIRREL3Q8IZU9 778 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 SPATA4Q8NEY3 305 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 NAF1Q96HR8 494 aaKnown RBP9.29□□□□□ -0.92
SMCO1-202ENST00000452776 SLF1Q9BQI6 1058 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 OSBPL1AQ9BXW6 950 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 FAM192AQ9GZU8 254 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 ZWILCHQ9H900 591 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 PLCB1Q9NQ66 1216 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 JADE2Q9NQC1 790 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 TMCO1Q9UM00 188 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 SNX12Q9UMY4 172 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 SLC12A4Q9UP95 1085 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 MROH1Q8NDA8 1641 aa9.29□□□□□ -0.92
SMCO1-202ENST00000452776 DIAPH2O60879 1101 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 DTNBO60941 627 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 BAG3O95817 575 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 GYPCP04921 128 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 CLTAP09496 248 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 GNPTABQ3T906 1256 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 MCMDC2Q4G0Z9 681 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 CROCCP2Q86T23 111 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 FAM114A1Q8IWE2 563 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 KRI1Q8N9T8 703 aaKnown RBP9.28□□□□□ -0.92
SMCO1-202ENST00000452776 DYDC1Q8WWB3 177 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 CCDC43Q96MW1 224 aaKnown RBP9.28□□□□□ -0.92
SMCO1-202ENST00000452776 ZNF570Q96NI8 536 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 TSPAN18Q96SJ8 248 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 LRRC1Q9BTT6 524 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 CCDC28BQ9BUN5 200 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 NSRP1Q9H0G5 558 aaKnown RBP9.28□□□□□ -0.92
SMCO1-202ENST00000452776 DMAP1Q9NPF5 467 aaPredicted RBP9.28□□□□□ -0.92
SMCO1-202ENST00000452776 GDF3Q9NR23 364 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 CTTNBP2NLQ9P2B4 639 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 CIDEBQ9UHD4 219 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 ABCC12Q96J65 1359 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 NCAPD2Q15021 1401 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 CLTCQ00610 1675 aaKnown RBP9.28□□□□□ -0.92
SMCO1-202ENST00000452776 ARHGEF28Q8N1W1 1705 aaKnown RBP9.28□□□□□ -0.92
SMCO1-202ENST00000452776 PPLO60437 1756 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 ZNF233A6NK53 670 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 HIP1RO75146 1068 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 POLR3DP05423 398 aaPredicted RBP9.28□□□□□ -0.92
SMCO1-202ENST00000452776 PYGLP06737 847 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 PYGBP11216 843 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 IDEP14735 1019 aa9.28□□□□□ -0.92
SMCO1-202ENST00000452776 NQO1P15559 274 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms