RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 KBTBD13C9JR72 458 aa25.61■■□□□ 1.69
C9orf3-208ENST00000451893 RANBP6O60518 1105 aaKnown RBP25.61■■□□□ 1.69
C9orf3-208ENST00000451893 ARRDC4Q8NCT1 418 aa25.61■■□□□ 1.69
C9orf3-208ENST00000451893 PLIN4Q96Q06 1357 aa25.6■■□□□ 1.69
C9orf3-208ENST00000451893 PGK2P07205 417 aa25.6■■□□□ 1.69
C9orf3-208ENST00000451893 BMP3P12645 472 aa25.6■■□□□ 1.69
C9orf3-208ENST00000451893 SYN1P17600 705 aa25.6■■□□□ 1.69
C9orf3-208ENST00000451893 MNX1P50219 401 aaPredicted RBP25.6■■□□□ 1.69
C9orf3-208ENST00000451893 MCMDC2Q4G0Z9 681 aa25.6■■□□□ 1.69
C9orf3-208ENST00000451893 ANO1Q5XXA6 986 aa25.6■■□□□ 1.69
C9orf3-208ENST00000451893 GMCL1P1Q8NEA9 526 aa25.6■■□□□ 1.69
C9orf3-208ENST00000451893 CHMP4CQ96CF2 233 aa25.6■■□□□ 1.69
C9orf3-208ENST00000451893 PCDH10Q9P2E7 1040 aa25.6■■□□□ 1.69
C9orf3-208ENST00000451893 ZNF214Q9UL59 606 aaPredicted RBP25.6■■□□□ 1.69
C9orf3-208ENST00000451893 PFASO15067 1338 aa25.6■■□□□ 1.69
C9orf3-208ENST00000451893 TRIOBPQ9H2D6 2365 aa25.59■■□□□ 1.69
C9orf3-208ENST00000451893 SEPT4O43236 478 aa25.59■■□□□ 1.69
C9orf3-208ENST00000451893 SLC1A4P43007 532 aa25.59■■□□□ 1.69
C9orf3-208ENST00000451893 RRP12Q5JTH9 1297 aaKnown RBP25.59■■□□□ 1.69
C9orf3-208ENST00000451893 MKL1Q969V6 931 aa25.59■■□□□ 1.69
C9orf3-208ENST00000451893 MTMR7Q9Y216 660 aa25.59■■□□□ 1.69
C9orf3-208ENST00000451893 DNM1LO00429 736 aa25.58■■□□□ 1.69
C9orf3-208ENST00000451893 STAT2P52630 851 aa25.58■■□□□ 1.69
C9orf3-208ENST00000451893 MFAP1P55081 439 aaKnown RBP25.58■■□□□ 1.69
C9orf3-208ENST00000451893 PRAMEF19Q5SWL8 479 aa25.58■■□□□ 1.69
C9orf3-208ENST00000451893 CHD1LQ86WJ1 897 aa25.58■■□□□ 1.69
C9orf3-208ENST00000451893 TRPV1Q8NER1 839 aa25.58■■□□□ 1.69
C9orf3-208ENST00000451893 CNPY2Q9Y2B0 182 aa25.58■■□□□ 1.69
C9orf3-208ENST00000451893 TMEM232C9JQI7 657 aa25.57■■□□□ 1.68
C9orf3-208ENST00000451893 GJC2Q5T442 439 aaPredicted RBP25.57■■□□□ 1.68
C9orf3-208ENST00000451893 VPS53Q5VIR6 699 aa25.57■■□□□ 1.68
C9orf3-208ENST00000451893 FAM227BQ96M60 508 aa25.57■■□□□ 1.68
C9orf3-208ENST00000451893 RAVER2Q9HCJ3 691 aaKnown RBP25.57■■□□□ 1.68
C9orf3-208ENST00000451893 PRKAG2Q9UGJ0 569 aa25.57■■□□□ 1.68
C9orf3-208ENST00000451893 A0A0D9SFI3 127 aa25.56■■□□□ 1.68
C9orf3-208ENST00000451893 ATN1P54259 1190 aaPredicted RBP25.56■■□□□ 1.68
C9orf3-208ENST00000451893 NMIQ13287 307 aaPredicted RBP25.56■■□□□ 1.68
C9orf3-208ENST00000451893 FAM160B2Q86V87 743 aa25.56■■□□□ 1.68
C9orf3-208ENST00000451893 ANKRD35Q8N283 1001 aa25.56■■□□□ 1.68
C9orf3-208ENST00000451893 REPS2Q8NFH8 660 aa25.56■■□□□ 1.68
C9orf3-208ENST00000451893 CHURC1Q8WUH1 139 aa25.56■■□□□ 1.68
C9orf3-208ENST00000451893 TINF2Q9BSI4 451 aa25.56■■□□□ 1.68
C9orf3-208ENST00000451893 FBXO40Q9UH90 709 aa25.56■■□□□ 1.68
C9orf3-208ENST00000451893 DIS3Q9Y2L1 958 aaKnown RBP25.56■■□□□ 1.68
C9orf3-208ENST00000451893 FDX1P10109 184 aa25.55■■□□□ 1.68
C9orf3-208ENST00000451893 RARBP10826 455 aa25.55■■□□□ 1.68
C9orf3-208ENST00000451893 COL6A1P12109 1028 aa25.55■■□□□ 1.68
C9orf3-208ENST00000451893 LRRC26Q2I0M4 334 aa25.55■■□□□ 1.68
C9orf3-208ENST00000451893 TICAM2Q86XR7 235 aa25.55■■□□□ 1.68
C9orf3-208ENST00000451893 DIAPH3Q9NSV4 1193 aa25.55■■□□□ 1.68
C9orf3-208ENST00000451893 A0A1W2PPC1 479 aa25.54■■□□□ 1.68
C9orf3-208ENST00000451893 MCCP23508 829 aa25.54■■□□□ 1.68
C9orf3-208ENST00000451893 CCDC96Q2M329 555 aa25.54■■□□□ 1.68
C9orf3-208ENST00000451893 SLC38A10Q9HBR0 1119 aa25.54■■□□□ 1.68
C9orf3-208ENST00000451893 HOMER2Q9NSB8 354 aa25.54■■□□□ 1.68
C9orf3-208ENST00000451893 NRBP1Q9UHY1 535 aa25.54■■□□□ 1.68
C9orf3-208ENST00000451893 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.54■■□□□ 1.68
C9orf3-208ENST00000451893 CCDC171Q6TFL3 1326 aa25.54■■□□□ 1.68
C9orf3-208ENST00000451893 OAZ1P54368 228 aa25.53■■□□□ 1.68
C9orf3-208ENST00000451893 ALX1Q15699 326 aa25.53■■□□□ 1.68
C9orf3-208ENST00000451893 ZNF792Q3KQV3 632 aa25.53■■□□□ 1.68
C9orf3-208ENST00000451893 GMCL1Q96IK5 515 aa25.53■■□□□ 1.68
C9orf3-208ENST00000451893 INCENPQ9NQS7 918 aa25.53■■□□□ 1.68
C9orf3-208ENST00000451893 ANAPC4Q9UJX5 808 aa25.53■■□□□ 1.68
C9orf3-208ENST00000451893 ATP2A1O14983 1001 aa25.52■■□□□ 1.68
C9orf3-208ENST00000451893 FGAP02671 866 aa25.52■■□□□ 1.68
C9orf3-208ENST00000451893 HSPD1P10809 573 aaKnown RBP25.52■■□□□ 1.68
C9orf3-208ENST00000451893 CHST13Q8NET6 341 aa25.52■■□□□ 1.68
C9orf3-208ENST00000451893 XPNPEP3Q9NQH7 507 aa25.52■■□□□ 1.68
C9orf3-208ENST00000451893 RIPK3Q9Y572 518 aa25.52■■□□□ 1.68
C9orf3-208ENST00000451893 FOXP2O15409 715 aa25.51■■□□□ 1.67
C9orf3-208ENST00000451893 NMT2O60551 498 aa25.51■■□□□ 1.67
C9orf3-208ENST00000451893 AKR1A1P14550 325 aa25.51■■□□□ 1.67
C9orf3-208ENST00000451893 HAND2P61296 217 aa25.51■■□□□ 1.67
C9orf3-208ENST00000451893 KCTD1Q719H9 257 aa25.51■■□□□ 1.67
C9orf3-208ENST00000451893 RNF180Q86T96 592 aa25.51■■□□□ 1.67
C9orf3-208ENST00000451893 STAG1Q8WVM7 1258 aa25.51■■□□□ 1.67
C9orf3-208ENST00000451893 LBHD1Q9BQE6 289 aaPredicted RBP25.51■■□□□ 1.67
C9orf3-208ENST00000451893 UBE2OQ9C0C9 1292 aaKnown RBP25.51■■□□□ 1.67
C9orf3-208ENST00000451893 ZHX1Q9UKY1 873 aaPredicted RBP25.51■■□□□ 1.67
C9orf3-208ENST00000451893 ATP11BQ9Y2G3 1177 aa25.51■■□□□ 1.67
C9orf3-208ENST00000451893 SMCHD1A6NHR9 2005 aa25.51■■□□□ 1.67
C9orf3-208ENST00000451893 HIP1O00291 1037 aa25.5■■□□□ 1.67
C9orf3-208ENST00000451893 ORC4O43929 436 aa25.5■■□□□ 1.67
C9orf3-208ENST00000451893 SDSP20132 328 aa25.5■■□□□ 1.67
C9orf3-208ENST00000451893 MAGEA10P43363 369 aaPredicted RBP25.5■■□□□ 1.67
C9orf3-208ENST00000451893 ZNF589Q86UQ0 364 aaPredicted RBP25.5■■□□□ 1.67
C9orf3-208ENST00000451893 MSL3Q8N5Y2 521 aaKnown RBP25.5■■□□□ 1.67
C9orf3-208ENST00000451893 ACAD9Q9H845 621 aa25.5■■□□□ 1.67
C9orf3-208ENST00000451893 IGHA2P01877 340 aa25.49■■□□□ 1.67
C9orf3-208ENST00000451893 RCSD1Q6JBY9 416 aa25.49■■□□□ 1.67
C9orf3-208ENST00000451893 CCDC174Q6PII3 467 aa25.49■■□□□ 1.67
C9orf3-208ENST00000451893 MFSD6Q6ZSS7 791 aa25.49■■□□□ 1.67
C9orf3-208ENST00000451893 PLEKHM2Q8IWE5 1019 aa25.49■■□□□ 1.67
C9orf3-208ENST00000451893 RNF41Q9H4P4 317 aaPredicted RBP25.49■■□□□ 1.67
C9orf3-208ENST00000451893 ZMYM6O95789 1325 aa25.48■■□□□ 1.67
C9orf3-208ENST00000451893 RTP1P59025 263 aa25.48■■□□□ 1.67
C9orf3-208ENST00000451893 LRRC41Q15345 812 aa25.48■■□□□ 1.67
C9orf3-208ENST00000451893 CWC27Q6UX04 472 aaKnown RBP25.48■■□□□ 1.67
C9orf3-208ENST00000451893 FERMT2Q96AC1 680 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms