RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 PPARAQ07869 468 aa32.29■■■□□ 2.76
USP42-204ENST00000451154 LRRC41Q15345 812 aa32.29■■■□□ 2.76
USP42-204ENST00000451154 CCDC129Q6ZRS4 1044 aa32.29■■■□□ 2.76
USP42-204ENST00000451154 NEDD1Q8NHV4 660 aa32.29■■■□□ 2.76
USP42-204ENST00000451154 ZBTB47Q9UFB7 747 aaPredicted RBP32.29■■■□□ 2.76
USP42-204ENST00000451154 ATP11BQ9Y2G3 1177 aa32.29■■■□□ 2.76
USP42-204ENST00000451154 SALL3Q9BXA9 1300 aa32.28■■■□□ 2.76
USP42-204ENST00000451154 ZBED4O75132 1171 aa32.28■■■□□ 2.76
USP42-204ENST00000451154 ADCYAP1R1P41586 468 aa32.28■■■□□ 2.76
USP42-204ENST00000451154 LRIT3Q3SXY7 679 aa32.28■■■□□ 2.76
USP42-204ENST00000451154 FERMT2Q96AC1 680 aa32.28■■■□□ 2.76
USP42-204ENST00000451154 NRBP1Q9UHY1 535 aa32.28■■■□□ 2.76
USP42-204ENST00000451154 CTDP1Q9Y5B0 961 aaPredicted RBP32.28■■■□□ 2.76
USP42-204ENST00000451154 LAMA2P24043 3122 aaKnown RBP32.28■■■□□ 2.76
USP42-204ENST00000451154 SLC3A2P08195 630 aaKnown RBP32.27■■■□□ 2.76
USP42-204ENST00000451154 DDX11Q96FC9 970 aa32.27■■■□□ 2.76
USP42-204ENST00000451154 RAVER2Q9HCJ3 691 aaKnown RBP32.27■■■□□ 2.76
USP42-204ENST00000451154 FEM1BQ9UK73 627 aa32.27■■■□□ 2.76
USP42-204ENST00000451154 SLFN13Q68D06 897 aa32.26■■■□□ 2.75
USP42-204ENST00000451154 GMCL1P1Q8NEA9 526 aa32.26■■■□□ 2.75
USP42-204ENST00000451154 LBHD1Q9BQE6 289 aaPredicted RBP32.26■■■□□ 2.75
USP42-204ENST00000451154 INCENPQ9NQS7 918 aa32.26■■■□□ 2.75
USP42-204ENST00000451154 COL6A3P12111 3177 aa32.26■■■□□ 2.75
USP42-204ENST00000451154 ZNF865P0CJ78 1059 aaPredicted RBP32.25■■■□□ 2.75
USP42-204ENST00000451154 RARBP10826 455 aa32.25■■■□□ 2.75
USP42-204ENST00000451154 CHMP4CQ96CF2 233 aa32.25■■■□□ 2.75
USP42-204ENST00000451154 SLC38A10Q9HBR0 1119 aa32.25■■■□□ 2.75
USP42-204ENST00000451154 XPNPEP3Q9NQH7 507 aa32.25■■■□□ 2.75
USP42-204ENST00000451154 SYNPO2Q9UMS6 1093 aa32.25■■■□□ 2.75
USP42-204ENST00000451154 ATP2A1O14983 1001 aa32.24■■■□□ 2.75
USP42-204ENST00000451154 FOXP2O15409 715 aa32.24■■■□□ 2.75
USP42-204ENST00000451154 CTDSPL2Q05D32 466 aa32.24■■■□□ 2.75
USP42-204ENST00000451154 PRKAG2Q9UGJ0 569 aa32.24■■■□□ 2.75
USP42-204ENST00000451154 PGK1P00558 417 aa32.23■■■□□ 2.75
USP42-204ENST00000451154 BMP3P12645 472 aa32.23■■■□□ 2.75
USP42-204ENST00000451154 CNPY2Q9Y2B0 182 aa32.23■■■□□ 2.75
USP42-204ENST00000451154 PLIN4Q96Q06 1357 aa32.22■■■□□ 2.75
USP42-204ENST00000451154 TRIM60Q495X7 471 aa32.22■■■□□ 2.75
USP42-204ENST00000451154 EVI5LQ96CN4 794 aa32.22■■■□□ 2.75
USP42-204ENST00000451154 ISY1Q9ULR0 285 aaKnown RBP32.22■■■□□ 2.75
USP42-204ENST00000451154 DNAJC25-GNG10A0A024R161 153 aa32.21■■■□□ 2.75
USP42-204ENST00000451154 TMEM232C9JQI7 657 aa32.21■■■□□ 2.75
USP42-204ENST00000451154 HDAC1Q13547 482 aaPredicted RBP32.21■■■□□ 2.75
USP42-204ENST00000451154 VPS53Q5VIR6 699 aa32.21■■■□□ 2.75
USP42-204ENST00000451154 GPR153Q6NV75 609 aa32.21■■■□□ 2.75
USP42-204ENST00000451154 LENG1Q96BZ8 264 aaPredicted RBP32.21■■■□□ 2.75
USP42-204ENST00000451154 SNAI1O95863 264 aaPredicted RBP32.2■■■□□ 2.75
USP42-204ENST00000451154 PDE1AP54750 535 aa32.2■■■□□ 2.75
USP42-204ENST00000451154 Q7L0L9 218 aa32.2■■■□□ 2.75
USP42-204ENST00000451154 DEFB123Q8N688 67 aa32.2■■■□□ 2.75
USP42-204ENST00000451154 DDX52Q9Y2R4 599 aaKnown RBP eCLIP32.2■■■□□ 2.75
USP42-204ENST00000451154 TACC3Q9Y6A5 838 aa32.2■■■□□ 2.75
USP42-204ENST00000451154 AKR1A1P14550 325 aa32.19■■■□□ 2.74
USP42-204ENST00000451154 MCCP23508 829 aa32.19■■■□□ 2.74
USP42-204ENST00000451154 SNX17Q15036 470 aa32.19■■■□□ 2.74
USP42-204ENST00000451154 RNF180Q86T96 592 aa32.19■■■□□ 2.74
USP42-204ENST00000451154 ANKRD35Q8N283 1001 aa32.19■■■□□ 2.74
USP42-204ENST00000451154 MSL3Q8N5Y2 521 aaKnown RBP32.19■■■□□ 2.74
USP42-204ENST00000451154 PRDM5Q9NQX1 630 aaPredicted RBP32.19■■■□□ 2.74
USP42-204ENST00000451154 PHF24Q9UPV7 400 aa32.19■■■□□ 2.74
USP42-204ENST00000451154 TSPY2A6NKD2 308 aa32.18■■■□□ 2.74
USP42-204ENST00000451154 NMT2O60551 498 aa32.18■■■□□ 2.74
USP42-204ENST00000451154 MAMDC4Q6UXC1 1216 aa32.18■■■□□ 2.74
USP42-204ENST00000451154 IL17RBQ9NRM6 502 aa32.18■■■□□ 2.74
USP42-204ENST00000451154 SLC1A4P43007 532 aa32.17■■■□□ 2.74
USP42-204ENST00000451154 OAZ1P54368 228 aa32.17■■■□□ 2.74
USP42-204ENST00000451154 CHST13Q8NET6 341 aa32.17■■■□□ 2.74
USP42-204ENST00000451154 HOMER2Q9NSB8 354 aa32.17■■■□□ 2.74
USP42-204ENST00000451154 STX8Q9UNK0 236 aa32.17■■■□□ 2.74
USP42-204ENST00000451154 SYNGAP1Q96PV0 1343 aa32.17■■■□□ 2.74
USP42-204ENST00000451154 SH3RF1Q7Z6J0 888 aa32.16■■■□□ 2.74
USP42-204ENST00000451154 CHURC1Q8WUH1 139 aa32.16■■■□□ 2.74
USP42-204ENST00000451154 STAG1Q8WVM7 1258 aa32.16■■■□□ 2.74
USP42-204ENST00000451154 GMCL1Q96IK5 515 aa32.16■■■□□ 2.74
USP42-204ENST00000451154 HELLSQ9NRZ9 838 aa32.16■■■□□ 2.74
USP42-204ENST00000451154 FBXO40Q9UH90 709 aa32.16■■■□□ 2.74
USP42-204ENST00000451154 ZHX1Q9UKY1 873 aaPredicted RBP32.16■■■□□ 2.74
USP42-204ENST00000451154 FAM184BQ9ULE4 1060 aa32.16■■■□□ 2.74
USP42-204ENST00000451154 RANBP6O60518 1105 aaKnown RBP32.15■■■□□ 2.74
USP42-204ENST00000451154 STAT2P52630 851 aa32.15■■■□□ 2.74
USP42-204ENST00000451154 TLE2Q04725 743 aa32.15■■■□□ 2.74
USP42-204ENST00000451154 IKQ13123 557 aaPredicted RBP32.15■■■□□ 2.74
USP42-204ENST00000451154 C1orf53Q5VUE5 145 aa32.15■■■□□ 2.74
USP42-204ENST00000451154 DHX30Q7L2E3 1194 aaKnown RBP eCLIP32.15■■■□□ 2.74
USP42-204ENST00000451154 FAM227BQ96M60 508 aa32.15■■■□□ 2.74
USP42-204ENST00000451154 ANAPC4Q9UJX5 808 aa32.15■■■□□ 2.74
USP42-204ENST00000451154 MCM3APO60318 1980 aa32.15■■■□□ 2.74
USP42-204ENST00000451154 TRIM43BA6NCK2 446 aa32.14■■■□□ 2.74
USP42-204ENST00000451154 FDX1P10109 184 aa32.14■■■□□ 2.74
USP42-204ENST00000451154 KCTD1Q719H9 257 aa32.14■■■□□ 2.74
USP42-204ENST00000451154 ZNF467Q7Z7K2 595 aaPredicted RBP32.14■■■□□ 2.74
USP42-204ENST00000451154 FAM160B2Q86V87 743 aa32.14■■■□□ 2.74
USP42-204ENST00000451154 TRIM43Q96BQ3 446 aaPredicted RBP32.14■■■□□ 2.74
USP42-204ENST00000451154 FGD4Q96M96 766 aa32.14■■■□□ 2.74
USP42-204ENST00000451154 AGBL1Q96MI9 1066 aa32.14■■■□□ 2.74
USP42-204ENST00000451154 YTHDC1Q96MU7 727 aaKnown RBP32.14■■■□□ 2.74
USP42-204ENST00000451154 PDLIM7Q9NR12 457 aa32.14■■■□□ 2.74
USP42-204ENST00000451154 ADAMTS4O75173 837 aa32.13■■■□□ 2.73
USP42-204ENST00000451154 ACVR2BQ13705 512 aa32.13■■■□□ 2.73
USP42-204ENST00000451154 ALX1Q15699 326 aa32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms