RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 SERPINB13Q9UIV8 391 aa24.77■■□□□ 1.56
NPAS1-202ENST00000449844 PCDHA4Q9UN74 947 aa24.77■■□□□ 1.56
NPAS1-202ENST00000449844 PCDHAC2Q9Y5I4 1007 aa24.77■■□□□ 1.56
NPAS1-202ENST00000449844 SERPINC1P01008 464 aa24.76■■□□□ 1.55
NPAS1-202ENST00000449844 NFIAQ12857 509 aa24.76■■□□□ 1.55
NPAS1-202ENST00000449844 GALNT17Q6IS24 598 aa24.76■■□□□ 1.55
NPAS1-202ENST00000449844 ENOX1Q8TC92 643 aaKnown RBP24.76■■□□□ 1.55
NPAS1-202ENST00000449844 SWAP70Q9UH65 585 aa24.76■■□□□ 1.55
NPAS1-202ENST00000449844 ATF5Q9Y2D1 282 aaPredicted RBP24.76■■□□□ 1.55
NPAS1-202ENST00000449844 VEGFAP15692 232 aaPredicted RBP24.76■■□□□ 1.55
NPAS1-202ENST00000449844 GRAMD1CQ8IYS0 662 aa24.76■■□□□ 1.55
NPAS1-202ENST00000449844 LARGE2Q8N3Y3 721 aa24.76■■□□□ 1.55
NPAS1-202ENST00000449844 CCDC148Q8NFR7 591 aa24.76■■□□□ 1.55
NPAS1-202ENST00000449844 FANCLQ9NW38 375 aa24.76■■□□□ 1.55
NPAS1-202ENST00000449844 PLIN4Q96Q06 1357 aa24.75■■□□□ 1.55
NPAS1-202ENST00000449844 BAZ2BQ9UIF8 2168 aaKnown RBP24.75■■□□□ 1.55
NPAS1-202ENST00000449844 A0A087X0B3 334 aa24.75■■□□□ 1.55
NPAS1-202ENST00000449844 PALM3A6NDB9 673 aaPredicted RBP24.75■■□□□ 1.55
NPAS1-202ENST00000449844 NRDCO43847 1150 aa24.75■■□□□ 1.55
NPAS1-202ENST00000449844 SOGA3Q5TF21 947 aa24.75■■□□□ 1.55
NPAS1-202ENST00000449844 DAGLBQ8NCG7 672 aa24.75■■□□□ 1.55
NPAS1-202ENST00000449844 TNNT1P13805 278 aa24.74■■□□□ 1.55
NPAS1-202ENST00000449844 SFPQP23246 707 aaKnown RBP eCLIP24.74■■□□□ 1.55
NPAS1-202ENST00000449844 TGFB2P61812 414 aa24.74■■□□□ 1.55
NPAS1-202ENST00000449844 ARL6IP4Q66PJ3 421 aaKnown RBP24.74■■□□□ 1.55
NPAS1-202ENST00000449844 CEP95Q96GE4 821 aa24.74■■□□□ 1.55
NPAS1-202ENST00000449844 C16orf45Q96MC5 204 aaPredicted RBP24.74■■□□□ 1.55
NPAS1-202ENST00000449844 MTFR1LQ9H019 292 aa24.74■■□□□ 1.55
NPAS1-202ENST00000449844 ZNF277Q9NRM2 450 aaPredicted RBP24.74■■□□□ 1.55
NPAS1-202ENST00000449844 MTMR7Q9Y216 660 aa24.74■■□□□ 1.55
NPAS1-202ENST00000449844 ERCC5P28715 1186 aaPredicted RBP24.74■■□□□ 1.55
NPAS1-202ENST00000449844 KCNJ6P48051 423 aa24.74■■□□□ 1.55
NPAS1-202ENST00000449844 ARMCX5Q6P1M9 558 aa24.74■■□□□ 1.55
NPAS1-202ENST00000449844 PAGE5Q96GU1 130 aa24.74■■□□□ 1.55
NPAS1-202ENST00000449844 PIM2Q9P1W9 311 aa24.74■■□□□ 1.55
NPAS1-202ENST00000449844 MYO3BQ8WXR4 1341 aa24.74■■□□□ 1.55
NPAS1-202ENST00000449844 VWA3AA6NCI4 1184 aa24.73■■□□□ 1.55
NPAS1-202ENST00000449844 CACNB3P54284 484 aa24.73■■□□□ 1.55
NPAS1-202ENST00000449844 TOP1P11387 765 aaKnown RBP24.73■■□□□ 1.55
NPAS1-202ENST00000449844 CFAP100Q494V2 611 aa24.73■■□□□ 1.55
NPAS1-202ENST00000449844 GPKOWQ92917 476 aaPredicted RBP eCLIP24.73■■□□□ 1.55
NPAS1-202ENST00000449844 SPZ1Q9BXG8 430 aa24.73■■□□□ 1.55
NPAS1-202ENST00000449844 IDI2Q9BXS1 227 aa24.73■■□□□ 1.55
NPAS1-202ENST00000449844 M0R2N6 131 aa24.72■■□□□ 1.55
NPAS1-202ENST00000449844 VSTM4Q8IW00 320 aa24.72■■□□□ 1.55
NPAS1-202ENST00000449844 DPF2Q92785 391 aa24.72■■□□□ 1.55
NPAS1-202ENST00000449844 GSDMAQ96QA5 445 aa24.72■■□□□ 1.55
NPAS1-202ENST00000449844 PAXBP1Q9Y5B6 917 aa24.72■■□□□ 1.55
NPAS1-202ENST00000449844 SIPA1L1O43166 1804 aa24.72■■□□□ 1.55
NPAS1-202ENST00000449844 COL4A5P29400 1685 aa24.72■■□□□ 1.55
NPAS1-202ENST00000449844 AKR1B1P15121 316 aa24.71■■□□□ 1.55
NPAS1-202ENST00000449844 MCM7P33993 719 aa24.71■■□□□ 1.55
NPAS1-202ENST00000449844 TCP10Q12799 353 aa24.71■■□□□ 1.55
NPAS1-202ENST00000449844 CCAR2Q8N163 923 aaKnown RBP24.71■■□□□ 1.55
NPAS1-202ENST00000449844 EHD4Q9H223 541 aa24.71■■□□□ 1.55
NPAS1-202ENST00000449844 VPS33BQ9H267 617 aa24.71■■□□□ 1.55
NPAS1-202ENST00000449844 DHX36Q9H2U1 1008 aaKnown RBP24.71■■□□□ 1.55
NPAS1-202ENST00000449844 BARHL2Q9NY43 387 aa24.71■■□□□ 1.55
NPAS1-202ENST00000449844 BRCA1P38398 1863 aaKnown RBP24.71■■□□□ 1.55
NPAS1-202ENST00000449844 RIOK3O14730 519 aaKnown RBP24.71■■□□□ 1.55
NPAS1-202ENST00000449844 CYTH3O43739 400 aa24.71■■□□□ 1.55
NPAS1-202ENST00000449844 ZNF18P17022 549 aa24.71■■□□□ 1.55
NPAS1-202ENST00000449844 FMR1Q06787 632 aaKnown RBP eCLIP24.71■■□□□ 1.55
NPAS1-202ENST00000449844 DPYDQ12882 1025 aa24.71■■□□□ 1.55
NPAS1-202ENST00000449844 HSP90AA2PQ14568 343 aaPredicted RBP24.71■■□□□ 1.55
NPAS1-202ENST00000449844 SLC35G1Q2M3R5 365 aa24.71■■□□□ 1.55
NPAS1-202ENST00000449844 WWC2Q6AWC2 1192 aa24.71■■□□□ 1.55
NPAS1-202ENST00000449844 RSBN1LQ6PCB5 846 aaPredicted RBP24.71■■□□□ 1.55
NPAS1-202ENST00000449844 ZFPM1Q8IX07 1006 aa24.71■■□□□ 1.55
NPAS1-202ENST00000449844 IQUBQ8NA54 791 aa24.71■■□□□ 1.55
NPAS1-202ENST00000449844 FAM198AQ9UFP1 575 aa24.71■■□□□ 1.55
NPAS1-202ENST00000449844 NFE2L3Q9Y4A8 694 aa24.71■■□□□ 1.55
NPAS1-202ENST00000449844 ADAMTS3O15072 1205 aa24.7■■□□□ 1.54
NPAS1-202ENST00000449844 RAD17O75943 681 aa24.7■■□□□ 1.54
NPAS1-202ENST00000449844 SMARCA1P28370 1054 aa24.7■■□□□ 1.54
NPAS1-202ENST00000449844 SHMT1P34896 483 aa24.7■■□□□ 1.54
NPAS1-202ENST00000449844 LONP1P36776 959 aaKnown RBP24.7■■□□□ 1.54
NPAS1-202ENST00000449844 NOVP48745 357 aa24.7■■□□□ 1.54
NPAS1-202ENST00000449844 C4orf32Q8N8J7 132 aa24.7■■□□□ 1.54
NPAS1-202ENST00000449844 MAP7D2Q96T17 732 aa24.7■■□□□ 1.54
NPAS1-202ENST00000449844 CCDC194A0A1B0GVG4 234 aa24.69■■□□□ 1.54
NPAS1-202ENST00000449844 STXBP3O00186 592 aa24.69■■□□□ 1.54
NPAS1-202ENST00000449844 AFMP43652 599 aa24.69■■□□□ 1.54
NPAS1-202ENST00000449844 E2F4Q16254 413 aa24.69■■□□□ 1.54
NPAS1-202ENST00000449844 NYAP1Q6ZVC0 841 aa24.69■■□□□ 1.54
NPAS1-202ENST00000449844 MTMR4Q9NYA4 1195 aa24.69■■□□□ 1.54
NPAS1-202ENST00000449844 GREB1LQ9C091 1923 aaPredicted RBP24.69■■□□□ 1.54
NPAS1-202ENST00000449844 KLRF2D3W0D1 207 aa24.69■■□□□ 1.54
NPAS1-202ENST00000449844 PSMD14O00487 310 aa24.69■■□□□ 1.54
NPAS1-202ENST00000449844 NPM3O75607 178 aaKnown RBP24.69■■□□□ 1.54
NPAS1-202ENST00000449844 TYW1BQ6NUM6 668 aa24.69■■□□□ 1.54
NPAS1-202ENST00000449844 MTERF4Q7Z6M4 381 aaKnown RBP24.69■■□□□ 1.54
NPAS1-202ENST00000449844 ZSCAN29Q8IWY8 852 aaPredicted RBP24.69■■□□□ 1.54
NPAS1-202ENST00000449844 TDRD3Q9H7E2 651 aaKnown RBP24.69■■□□□ 1.54
NPAS1-202ENST00000449844 USP27XA6NNY8 438 aa24.68■■□□□ 1.54
NPAS1-202ENST00000449844 PARP1P09874 1014 aaKnown RBP24.68■■□□□ 1.54
NPAS1-202ENST00000449844 PTPN14Q15678 1187 aa24.68■■□□□ 1.54
NPAS1-202ENST00000449844 DALRD3Q5D0E6 543 aaKnown RBP24.68■■□□□ 1.54
NPAS1-202ENST00000449844 HEATR3Q7Z4Q2 680 aa24.68■■□□□ 1.54
NPAS1-202ENST00000449844 NIM1KQ8IY84 436 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms