RNA–Protein interactions for RNA: ENST00000445268.5

RPE-213, Transcript of ribulose-5-phosphate-3-epimerase, human

TSL 5 BASIC

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPE-213	ENST00000445268	RIF1	Q5UIP0	2472 aa	Known RBP	11.25	□□□□□ -0.61
RPE-213	ENST00000445268	CIAO1	O76071	339 aa		11.25	□□□□□ -0.61
RPE-213	ENST00000445268	HLA-DOA	P06340	250 aa		11.25	□□□□□ -0.61
RPE-213	ENST00000445268	GUCY1A2	P33402	732 aa		11.25	□□□□□ -0.61
RPE-213	ENST00000445268	COG2	Q14746	738 aa		11.25	□□□□□ -0.61
RPE-213	ENST00000445268	CCDC27	Q2M243	656 aa		11.25	□□□□□ -0.61
RPE-213	ENST00000445268	XAGE2	Q96GT9	111 aa		11.25	□□□□□ -0.61
RPE-213	ENST00000445268	NOL10	Q9BSC4	688 aa	Known RBP	11.25	□□□□□ -0.61
RPE-213	ENST00000445268	USP44	Q9H0E7	712 aa		11.25	□□□□□ -0.61
RPE-213	ENST00000445268	MYO15A	Q9UKN7	3530 aa		11.25	□□□□□ -0.61
RPE-213	ENST00000445268	ATG2A	Q2TAZ0	1938 aa		11.25	□□□□□ -0.61
RPE-213	ENST00000445268	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.24	□□□□□ -0.61
RPE-213	ENST00000445268		A0A1B0GUL7	405 aa		11.24	□□□□□ -0.61
RPE-213	ENST00000445268		A0A1W2PRG0	241 aa		11.24	□□□□□ -0.61
RPE-213	ENST00000445268	LCHN	A4D1U4	455 aa		11.24	□□□□□ -0.61
RPE-213	ENST00000445268	B4GALT4	O60513	344 aa		11.24	□□□□□ -0.61
RPE-213	ENST00000445268	SNAI1	O95863	264 aa	Predicted RBP	11.24	□□□□□ -0.61
RPE-213	ENST00000445268	PTPN5	P54829	565 aa		11.24	□□□□□ -0.61
RPE-213	ENST00000445268	BEX3	Q00994	111 aa		11.24	□□□□□ -0.61
RPE-213	ENST00000445268	TCF15	Q12870	199 aa		11.24	□□□□□ -0.61
RPE-213	ENST00000445268	ABCB5	Q2M3G0	1257 aa		11.24	□□□□□ -0.61
RPE-213	ENST00000445268	DEFB128	Q7Z7B8	93 aa		11.24	□□□□□ -0.61
RPE-213	ENST00000445268	PCSK9	Q8NBP7	692 aa	Known RBP	11.24	□□□□□ -0.61
RPE-213	ENST00000445268	TRPV6	Q9H1D0	765 aa		11.24	□□□□□ -0.61
RPE-213	ENST00000445268	FAM184B	Q9ULE4	1060 aa		11.24	□□□□□ -0.61
RPE-213	ENST00000445268	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.24	□□□□□ -0.61
RPE-213	ENST00000445268	COL4A6	Q14031	1691 aa		11.24	□□□□□ -0.61
RPE-213	ENST00000445268	GRXCR2	A6NFK2	248 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268		H3BQ06	376 aa	Predicted RBP	11.23	□□□□□ -0.61
RPE-213	ENST00000445268	RBAK-RBAKDN	I3L0D1	243 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	CTAGE5	O15320	804 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	DUSP11	O75319	330 aa	Known RBP	11.23	□□□□□ -0.61
RPE-213	ENST00000445268	FLOT1	O75955	427 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	RGS20	O76081	388 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	DSG3	P32926	999 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	ZP2	Q05996	745 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	TMEM132B	Q14DG7	1078 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	SEPT2	Q15019	361 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	GNAS	Q5JWF2	1037 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	TATDN1	Q6P1N9	297 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	SPATA5	Q8NB90	893 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	MFSD14A	Q96MC6	490 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	AGBL1	Q96MI9	1066 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	UPF3A	Q9H1J1	476 aa	Known RBP	11.23	□□□□□ -0.61
RPE-213	ENST00000445268	HOXC10	Q9NYD6	342 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	MTUS1	Q9ULD2	1270 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	MYO7A	Q13402	2215 aa		11.23	□□□□□ -0.61
RPE-213	ENST00000445268	GRIN2D	O15399	1336 aa		11.22	□□□□□ -0.61
RPE-213	ENST00000445268	KRT37	O76014	449 aa		11.22	□□□□□ -0.61
RPE-213	ENST00000445268	PTGS1	P23219	599 aa		11.22	□□□□□ -0.61
RPE-213	ENST00000445268	IL15	P40933	162 aa	Predicted RBP	11.22	□□□□□ -0.61
RPE-213	ENST00000445268	GJA9	P57773	515 aa		11.22	□□□□□ -0.61
RPE-213	ENST00000445268	DYNLL1	P63167	89 aa	Known RBP	11.22	□□□□□ -0.61
RPE-213	ENST00000445268	MVP	Q14764	893 aa	Known RBP	11.22	□□□□□ -0.61
RPE-213	ENST00000445268	CERKL	Q49MI3	558 aa	Predicted RBP	11.22	□□□□□ -0.61
RPE-213	ENST00000445268	NAA16	Q6N069	864 aa	Predicted RBP	11.22	□□□□□ -0.61
RPE-213	ENST00000445268	CXCL17	Q6UXB2	119 aa		11.22	□□□□□ -0.61
RPE-213	ENST00000445268	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.22	□□□□□ -0.61
RPE-213	ENST00000445268	CLEC10A	Q8IUN9	316 aa		11.22	□□□□□ -0.61
RPE-213	ENST00000445268	RPUSD2	Q8IZ73	545 aa	Known RBP	11.22	□□□□□ -0.61
RPE-213	ENST00000445268	MB21D1	Q8N884	522 aa		11.22	□□□□□ -0.61
RPE-213	ENST00000445268	SLC9A7	Q96T83	725 aa		11.22	□□□□□ -0.61
RPE-213	ENST00000445268	LRP2BP	Q9P2M1	347 aa		11.22	□□□□□ -0.61
RPE-213	ENST00000445268	MUTYH	Q9UIF7	546 aa		11.22	□□□□□ -0.61
RPE-213	ENST00000445268	EPG5	Q9HCE0	2579 aa		11.22	□□□□□ -0.61
RPE-213	ENST00000445268	TRIP12	Q14669	1992 aa	Predicted RBP	11.21	□□□□□ -0.61
RPE-213	ENST00000445268	BAG3	O95817	575 aa		11.21	□□□□□ -0.61
RPE-213	ENST00000445268	PLCG2	P16885	1265 aa		11.21	□□□□□ -0.61
RPE-213	ENST00000445268	SHMT1	P34896	483 aa		11.21	□□□□□ -0.61
RPE-213	ENST00000445268	MCAM	P43121	646 aa		11.21	□□□□□ -0.61
RPE-213	ENST00000445268	KCTD2	Q14681	263 aa		11.21	□□□□□ -0.61
RPE-213	ENST00000445268	ATF7IP	Q6VMQ6	1270 aa		11.21	□□□□□ -0.61
RPE-213	ENST00000445268	HERC6	Q8IVU3	1022 aa		11.21	□□□□□ -0.61
RPE-213	ENST00000445268	SPICE1	Q8N0Z3	855 aa		11.21	□□□□□ -0.61
RPE-213	ENST00000445268	SLC43A3	Q8NBI5	491 aa		11.21	□□□□□ -0.61
RPE-213	ENST00000445268	FBXO3	Q9UK99	471 aa		11.21	□□□□□ -0.61
RPE-213	ENST00000445268	DIS3	Q9Y2L1	958 aa	Known RBP	11.21	□□□□□ -0.61
RPE-213	ENST00000445268	ASTN1	O14525	1302 aa		11.2	□□□□□ -0.62
RPE-213	ENST00000445268	SOWAHB	A6NEL2	793 aa		11.2	□□□□□ -0.62
RPE-213	ENST00000445268	IRS1	P35568	1242 aa		11.2	□□□□□ -0.62
RPE-213	ENST00000445268	PPP4C	P60510	307 aa		11.2	□□□□□ -0.62
RPE-213	ENST00000445268	PSMC6	P62333	389 aa		11.2	□□□□□ -0.62
RPE-213	ENST00000445268	EVX2	Q03828	476 aa		11.2	□□□□□ -0.62
RPE-213	ENST00000445268	TFCP2	Q12800	502 aa		11.2	□□□□□ -0.62
RPE-213	ENST00000445268	ITGA7	Q13683	1181 aa		11.2	□□□□□ -0.62
RPE-213	ENST00000445268	CCDC144B	Q3MJ40	725 aa		11.2	□□□□□ -0.62
RPE-213	ENST00000445268	SPC25	Q9HBM1	224 aa		11.2	□□□□□ -0.62
RPE-213	ENST00000445268	CABP5	Q9NP86	173 aa		11.2	□□□□□ -0.62
RPE-213	ENST00000445268	FBXO28	Q9NVF7	368 aa		11.2	□□□□□ -0.62
RPE-213	ENST00000445268	SERPINB13	Q9UIV8	391 aa		11.2	□□□□□ -0.62
RPE-213	ENST00000445268	SALL2	Q9Y467	1007 aa	Predicted RBP	11.2	□□□□□ -0.62
RPE-213	ENST00000445268	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.19	□□□□□ -0.62
RPE-213	ENST00000445268	SLC25A27	O95847	323 aa		11.19	□□□□□ -0.62
RPE-213	ENST00000445268	CYP2C9	P11712	490 aa		11.19	□□□□□ -0.62
RPE-213	ENST00000445268	ARID4A	P29374	1257 aa	Predicted RBP	11.19	□□□□□ -0.62
RPE-213	ENST00000445268	ACVR2B	Q13705	512 aa		11.19	□□□□□ -0.62
RPE-213	ENST00000445268	RIOX2	Q8IUF8	465 aa		11.19	□□□□□ -0.62
RPE-213	ENST00000445268	NEUROD6	Q96NK8	337 aa		11.19	□□□□□ -0.62
RPE-213	ENST00000445268	SUGCT	Q9HAC7	445 aa		11.19	□□□□□ -0.62
RPE-213	ENST00000445268	ALG13	Q9NP73	1137 aa	Known RBP	11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms