RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 LCHNA4D1U4 455 aa12.66□□□□□ -0.38
HDAC8-215ENST00000444609 GH2P01242 217 aa12.66□□□□□ -0.38
HDAC8-215ENST00000444609 PGK2P07205 417 aa12.66□□□□□ -0.38
HDAC8-215ENST00000444609 PHKA1P46020 1223 aa12.66□□□□□ -0.38
HDAC8-215ENST00000444609 GJA9P57773 515 aa12.66□□□□□ -0.38
HDAC8-215ENST00000444609 GNASQ5JWF2 1037 aa12.66□□□□□ -0.38
HDAC8-215ENST00000444609 DEFB128Q7Z7B8 93 aa12.66□□□□□ -0.38
HDAC8-215ENST00000444609 ADSSL1Q8N142 457 aa12.66□□□□□ -0.38
HDAC8-215ENST00000444609 ACER1Q8TDN7 264 aa12.66□□□□□ -0.38
HDAC8-215ENST00000444609 RMDN1Q96DB5 314 aa12.66□□□□□ -0.38
HDAC8-215ENST00000444609 POP1Q99575 1024 aaKnown RBP12.66□□□□□ -0.38
HDAC8-215ENST00000444609 TRPV6Q9H1D0 765 aa12.66□□□□□ -0.38
HDAC8-215ENST00000444609 UPF3AQ9H1J1 476 aaKnown RBP12.66□□□□□ -0.38
HDAC8-215ENST00000444609 BICC1Q9H694 974 aaKnown RBP12.66□□□□□ -0.38
HDAC8-215ENST00000444609 SPC25Q9HBM1 224 aa12.66□□□□□ -0.38
HDAC8-215ENST00000444609 TPRP12270 2363 aaKnown RBP12.65□□□□□ -0.38
HDAC8-215ENST00000444609 ATRXP46100 2492 aa12.65□□□□□ -0.38
HDAC8-215ENST00000444609 NUBP1P53384 320 aa12.65□□□□□ -0.38
HDAC8-215ENST00000444609 ERVK-21P61565 698 aa12.65□□□□□ -0.38
HDAC8-215ENST00000444609 TEX11Q8IYF3 940 aa12.65□□□□□ -0.38
HDAC8-215ENST00000444609 CRACR2BQ8N4Y2 399 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-215ENST00000444609 MB21D1Q8N884 522 aa12.65□□□□□ -0.38
HDAC8-215ENST00000444609 PABPC5Q96DU9 382 aaKnown RBP12.65□□□□□ -0.38
HDAC8-215ENST00000444609 TRIM34Q9BYJ4 488 aa12.65□□□□□ -0.38
HDAC8-215ENST00000444609 DNAH14Q0VDD8 3507 aa12.65□□□□□ -0.38
HDAC8-215ENST00000444609 PLXNA3P51805 1871 aa12.65□□□□□ -0.38
HDAC8-215ENST00000444609 GRIN2DO15399 1336 aa12.64□□□□□ -0.39
HDAC8-215ENST00000444609 CTAGE5O15320 804 aa12.64□□□□□ -0.39
HDAC8-215ENST00000444609 B4GALT4O60513 344 aa12.64□□□□□ -0.39
HDAC8-215ENST00000444609 ALDH1L1O75891 902 aa12.64□□□□□ -0.39
HDAC8-215ENST00000444609 SNAI1O95863 264 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-215ENST00000444609 NBPF7P0C2Y1 421 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-215ENST00000444609 NKX3-2P78367 333 aa12.64□□□□□ -0.39
HDAC8-215ENST00000444609 ZXDAP98168 799 aa12.64□□□□□ -0.39
HDAC8-215ENST00000444609 PLS1Q14651 629 aa12.64□□□□□ -0.39
HDAC8-215ENST00000444609 COL19A1Q14993 1142 aa12.64□□□□□ -0.39
HDAC8-215ENST00000444609 SMAD2Q15796 467 aaKnown RBP12.64□□□□□ -0.39
HDAC8-215ENST00000444609 MSL3Q8N5Y2 521 aaKnown RBP12.64□□□□□ -0.39
HDAC8-215ENST00000444609 ANKRD44Q8N8A2 993 aa12.64□□□□□ -0.39
HDAC8-215ENST00000444609 MMP19Q99542 508 aa12.64□□□□□ -0.39
HDAC8-215ENST00000444609 SEZ6LQ9BYH1 1024 aa12.64□□□□□ -0.39
HDAC8-215ENST00000444609 MTUS1Q9ULD2 1270 aa12.64□□□□□ -0.39
HDAC8-215ENST00000444609 MYH2Q9UKX2 1941 aa12.64□□□□□ -0.39
HDAC8-215ENST00000444609 GVINP1Q7Z2Y8 2422 aa12.63□□□□□ -0.39
HDAC8-215ENST00000444609 CFAP47Q6ZTR5 3102 aa12.63□□□□□ -0.39
HDAC8-215ENST00000444609 EYA2O00167 538 aa12.63□□□□□ -0.39
HDAC8-215ENST00000444609 ADCY6O43306 1168 aa12.63□□□□□ -0.39
HDAC8-215ENST00000444609 LDHCP07864 332 aa12.63□□□□□ -0.39
HDAC8-215ENST00000444609 ITGA7Q13683 1181 aa12.63□□□□□ -0.39
HDAC8-215ENST00000444609 ERICH6Q7L0X2 663 aa12.63□□□□□ -0.39
HDAC8-215ENST00000444609 TSR2Q969E8 191 aaKnown RBP12.63□□□□□ -0.39
HDAC8-215ENST00000444609 NKD2Q969F2 451 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-215ENST00000444609 TGS1Q96RS0 853 aaKnown RBP12.63□□□□□ -0.39
HDAC8-215ENST00000444609 PDS5AQ29RF7 1337 aaKnown RBP12.62□□□□□ -0.39
HDAC8-215ENST00000444609 CABYRO75952 493 aa12.62□□□□□ -0.39
HDAC8-215ENST00000444609 SLC25A27O95847 323 aa12.62□□□□□ -0.39
HDAC8-215ENST00000444609 GSTO1P78417 241 aa12.62□□□□□ -0.39
HDAC8-215ENST00000444609 RASGRF1Q13972 1273 aa12.62□□□□□ -0.39
HDAC8-215ENST00000444609 ATP2B3Q16720 1220 aa12.62□□□□□ -0.39
HDAC8-215ENST00000444609 NBPF20Q3BBV1 942 aa12.62□□□□□ -0.39
HDAC8-215ENST00000444609 CCDC102BQ68D86 513 aa12.62□□□□□ -0.39
HDAC8-215ENST00000444609 CXCL17Q6UXB2 119 aa12.62□□□□□ -0.39
HDAC8-215ENST00000444609 SH3RF3Q8TEJ3 882 aaPredicted RBP12.62□□□□□ -0.39
HDAC8-215ENST00000444609 MRPL38Q96DV4 380 aaKnown RBP12.62□□□□□ -0.39
HDAC8-215ENST00000444609 ZHX1Q9UKY1 873 aaPredicted RBP12.62□□□□□ -0.39
HDAC8-215ENST00000444609 ADAMTS8Q9UP79 889 aa12.62□□□□□ -0.39
HDAC8-215ENST00000444609 CHD6Q8TD26 2715 aa12.61□□□□□ -0.39
HDAC8-215ENST00000444609 A0A1B0GUL7 405 aa12.61□□□□□ -0.39
HDAC8-215ENST00000444609 GALR2O43603 387 aaPredicted RBP12.61□□□□□ -0.39
HDAC8-215ENST00000444609 DSG3P32926 999 aa12.61□□□□□ -0.39
HDAC8-215ENST00000444609 RFC2P35250 354 aa12.61□□□□□ -0.39
HDAC8-215ENST00000444609 RAB3GAP1Q15042 981 aa12.61□□□□□ -0.39
HDAC8-215ENST00000444609 TATDN1Q6P1N9 297 aa12.61□□□□□ -0.39
HDAC8-215ENST00000444609 MAMDC4Q6UXC1 1216 aa12.61□□□□□ -0.39
HDAC8-215ENST00000444609 ATG9AQ7Z3C6 839 aa12.61□□□□□ -0.39
HDAC8-215ENST00000444609 NSUN4Q96CB9 384 aaKnown RBP12.61□□□□□ -0.39
HDAC8-215ENST00000444609 SIL1Q9H173 461 aa12.61□□□□□ -0.39
HDAC8-215ENST00000444609 CTNNA3Q9UI47 895 aa12.61□□□□□ -0.39
HDAC8-215ENST00000444609 PALD1Q9ULE6 856 aa12.61□□□□□ -0.39
HDAC8-215ENST00000444609 ACACBO00763 2458 aa12.61□□□□□ -0.39
HDAC8-215ENST00000444609 COL4A4P53420 1690 aaPredicted RBP12.61□□□□□ -0.39
HDAC8-215ENST00000444609 BEX3Q00994 111 aa12.6□□□□□ -0.39
HDAC8-215ENST00000444609 SIGLEC14Q08ET2 396 aa12.6□□□□□ -0.39
HDAC8-215ENST00000444609 ACVR2BQ13705 512 aa12.6□□□□□ -0.39
HDAC8-215ENST00000444609 ST3GAL2Q16842 350 aa12.6□□□□□ -0.39
HDAC8-215ENST00000444609 EP400NLQ6ZTU2 488 aa12.6□□□□□ -0.39
HDAC8-215ENST00000444609 ASIC4Q96FT7 647 aa12.6□□□□□ -0.39
HDAC8-215ENST00000444609 TANGO6Q9C0B7 1094 aa12.6□□□□□ -0.39
HDAC8-215ENST00000444609 SRCIN1Q9C0H9 1055 aa12.6□□□□□ -0.39
HDAC8-215ENST00000444609 LINC01553A4QN01 128 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 APAF1O14727 1248 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 KDM4AO75164 1064 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 BAIAP3O94812 1187 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 LTBRP36941 435 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 PUM1Q14671 1186 aaKnown RBP eCLIP12.59□□□□□ -0.39
HDAC8-215ENST00000444609 TMEM132BQ14DG7 1078 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 PTPROQ16827 1216 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 CCDC144BQ3MJ40 725 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 FRMD5Q7Z6J6 570 aa12.59□□□□□ -0.39
HDAC8-215ENST00000444609 TMCO2Q7Z6W1 182 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms