RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 TSPY2A6NKD2 308 aa16.59■□□□□ 0.25
TREX1-202ENST00000444177 FGAP02671 866 aa16.59■□□□□ 0.25
TREX1-202ENST00000444177 SYN1P17600 705 aa16.59■□□□□ 0.25
TREX1-202ENST00000444177 TFAP4Q01664 338 aa16.59■□□□□ 0.25
TREX1-202ENST00000444177 ALX1Q15699 326 aa16.59■□□□□ 0.25
TREX1-202ENST00000444177 PRAMEF19Q5SWL8 479 aa16.59■□□□□ 0.25
TREX1-202ENST00000444177 PRPF38AQ8NAV1 312 aaKnown RBP16.59■□□□□ 0.25
TREX1-202ENST00000444177 MMP19Q99542 508 aa16.59■□□□□ 0.25
TREX1-202ENST00000444177 GDF15Q99988 308 aa16.59■□□□□ 0.25
TREX1-202ENST00000444177 SENP6Q9GZR1 1112 aaPredicted RBP16.59■□□□□ 0.25
TREX1-202ENST00000444177 TOMM22Q9NS69 142 aa16.59■□□□□ 0.25
TREX1-202ENST00000444177 ANAPC4Q9UJX5 808 aa16.59■□□□□ 0.25
TREX1-202ENST00000444177 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.59■□□□□ 0.25
TREX1-202ENST00000444177 A0A1W2PPC1 479 aa16.58■□□□□ 0.24
TREX1-202ENST00000444177 TTLL1O95922 423 aa16.58■□□□□ 0.24
TREX1-202ENST00000444177 PGK2P07205 417 aa16.58■□□□□ 0.24
TREX1-202ENST00000444177 BMP8BP34820 402 aa16.58■□□□□ 0.24
TREX1-202ENST00000444177 COPB2P35606 906 aa16.58■□□□□ 0.24
TREX1-202ENST00000444177 HAND2P61296 217 aa16.58■□□□□ 0.24
TREX1-202ENST00000444177 KCTD2Q14681 263 aa16.58■□□□□ 0.24
TREX1-202ENST00000444177 LRRC26Q2I0M4 334 aa16.58■□□□□ 0.24
TREX1-202ENST00000444177 LRRC47Q8N1G4 583 aaKnown RBP16.58■□□□□ 0.24
TREX1-202ENST00000444177 INCENPQ9NQS7 918 aa16.58■□□□□ 0.24
TREX1-202ENST00000444177 SYNPO2Q9UMS6 1093 aa16.58■□□□□ 0.24
TREX1-202ENST00000444177 LAMA4Q16363 1823 aa16.58■□□□□ 0.24
TREX1-202ENST00000444177 ZNFX1Q9P2E3 1918 aaKnown RBP16.57■□□□□ 0.24
TREX1-202ENST00000444177 PARP14Q460N5 1801 aa16.57■□□□□ 0.24
TREX1-202ENST00000444177 ZNF236Q9UL36 1845 aa16.57■□□□□ 0.24
TREX1-202ENST00000444177 SEPT4O43236 478 aa16.57■□□□□ 0.24
TREX1-202ENST00000444177 RANBP6O60518 1105 aaKnown RBP16.57■□□□□ 0.24
TREX1-202ENST00000444177 ZNF792Q3KQV3 632 aa16.57■□□□□ 0.24
TREX1-202ENST00000444177 RRP12Q5JTH9 1297 aaKnown RBP16.57■□□□□ 0.24
TREX1-202ENST00000444177 ANO1Q5XXA6 986 aa16.57■□□□□ 0.24
TREX1-202ENST00000444177 CENPQQ7L2Z9 268 aaPredicted RBP16.57■□□□□ 0.24
TREX1-202ENST00000444177 ARRDC4Q8NCT1 418 aa16.57■□□□□ 0.24
TREX1-202ENST00000444177 TEX13BQ9BXU2 312 aa16.57■□□□□ 0.24
TREX1-202ENST00000444177 DIS3Q9Y2L1 958 aaKnown RBP16.57■□□□□ 0.24
TREX1-202ENST00000444177 DNM1LO00429 736 aa16.56■□□□□ 0.24
TREX1-202ENST00000444177 ZBED4O75132 1171 aa16.56■□□□□ 0.24
TREX1-202ENST00000444177 GJC2Q5T442 439 aaPredicted RBP16.56■□□□□ 0.24
TREX1-202ENST00000444177 SNRNP48Q6IEG0 339 aaKnown RBP16.56■□□□□ 0.24
TREX1-202ENST00000444177 GMCL1P1Q8NEA9 526 aa16.56■□□□□ 0.24
TREX1-202ENST00000444177 KIFC2Q96AC6 838 aa16.56■□□□□ 0.24
TREX1-202ENST00000444177 FEM1BQ9UK73 627 aa16.56■□□□□ 0.24
TREX1-202ENST00000444177 RIPK3Q9Y572 518 aa16.56■□□□□ 0.24
TREX1-202ENST00000444177 TACC3Q9Y6A5 838 aa16.56■□□□□ 0.24
TREX1-202ENST00000444177 COL11A1P12107 1806 aaPredicted RBP16.55■□□□□ 0.24
TREX1-202ENST00000444177 ATP2A1O14983 1001 aa16.55■□□□□ 0.24
TREX1-202ENST00000444177 ORC4O43929 436 aa16.55■□□□□ 0.24
TREX1-202ENST00000444177 MAGEA10P43363 369 aaPredicted RBP16.55■□□□□ 0.24
TREX1-202ENST00000444177 PPP4R3BQ5MIZ7 849 aa16.55■□□□□ 0.24
TREX1-202ENST00000444177 SLFN13Q68D06 897 aa16.55■□□□□ 0.24
TREX1-202ENST00000444177 TBC1D10CQ8IV04 446 aa16.55■□□□□ 0.24
TREX1-202ENST00000444177 CPXCR1Q8N123 301 aa16.55■□□□□ 0.24
TREX1-202ENST00000444177 TINF2Q9BSI4 451 aa16.55■□□□□ 0.24
TREX1-202ENST00000444177 NRBP1Q9UHY1 535 aa16.55■□□□□ 0.24
TREX1-202ENST00000444177 ISY1Q9ULR0 285 aaKnown RBP16.55■□□□□ 0.24
TREX1-202ENST00000444177 STX8Q9UNK0 236 aa16.55■□□□□ 0.24
TREX1-202ENST00000444177 SMCHD1A6NHR9 2005 aa16.55■□□□□ 0.24
TREX1-202ENST00000444177 LAMA3Q16787 3333 aa16.55■□□□□ 0.24
TREX1-202ENST00000444177 DNAH12Q6ZR08 3092 aa16.54■□□□□ 0.24
TREX1-202ENST00000444177 RAD50Q92878 1312 aa16.54■□□□□ 0.24
TREX1-202ENST00000444177 ZNF213O14771 459 aa16.54■□□□□ 0.24
TREX1-202ENST00000444177 NMT2O60551 498 aa16.54■□□□□ 0.24
TREX1-202ENST00000444177 BMP3P12645 472 aa16.54■□□□□ 0.24
TREX1-202ENST00000444177 SLC4A3P48751 1232 aa16.54■□□□□ 0.24
TREX1-202ENST00000444177 ATN1P54259 1190 aaPredicted RBP16.54■□□□□ 0.24
TREX1-202ENST00000444177 DDX11Q96FC9 970 aa16.54■□□□□ 0.24
TREX1-202ENST00000444177 IL25Q9H293 177 aa16.54■□□□□ 0.24
TREX1-202ENST00000444177 SLC38A10Q9HBR0 1119 aa16.54■□□□□ 0.24
TREX1-202ENST00000444177 RAVER2Q9HCJ3 691 aaKnown RBP16.54■□□□□ 0.24
TREX1-202ENST00000444177 CTDP1Q9Y5B0 961 aaPredicted RBP16.54■□□□□ 0.24
TREX1-202ENST00000444177 SOX1O00570 391 aaPredicted RBP16.53■□□□□ 0.24
TREX1-202ENST00000444177 MYCNP04198 464 aaPredicted RBP16.53■□□□□ 0.24
TREX1-202ENST00000444177 TAL1P17542 331 aaPredicted RBP16.53■□□□□ 0.24
TREX1-202ENST00000444177 AKNAD1Q5T1N1 836 aa16.53■□□□□ 0.24
TREX1-202ENST00000444177 MFSD6Q6ZSS7 791 aa16.53■□□□□ 0.24
TREX1-202ENST00000444177 STAG1Q8WVM7 1258 aa16.53■□□□□ 0.24
TREX1-202ENST00000444177 RUFY2Q8WXA3 655 aa16.53■□□□□ 0.24
TREX1-202ENST00000444177 DSCC1Q9BVC3 393 aa16.53■□□□□ 0.24
TREX1-202ENST00000444177 RNF41Q9H4P4 317 aaPredicted RBP16.53■□□□□ 0.24
TREX1-202ENST00000444177 IL17RBQ9NRM6 502 aa16.53■□□□□ 0.24
TREX1-202ENST00000444177 NEDD4P46934 1319 aa16.52■□□□□ 0.24
TREX1-202ENST00000444177 TMEM232C9JQI7 657 aa16.52■□□□□ 0.24
TREX1-202ENST00000444177 KBTBD13C9JR72 458 aa16.52■□□□□ 0.24
TREX1-202ENST00000444177 FGRP09769 529 aa16.52■□□□□ 0.24
TREX1-202ENST00000444177 PCP11498 1178 aaKnown RBP16.52■□□□□ 0.24
TREX1-202ENST00000444177 MCCP23508 829 aa16.52■□□□□ 0.24
TREX1-202ENST00000444177 CHMLP26374 656 aa16.52■□□□□ 0.24
TREX1-202ENST00000444177 LRRC41Q15345 812 aa16.52■□□□□ 0.24
TREX1-202ENST00000444177 SKAP1Q86WV1 359 aa16.52■□□□□ 0.24
TREX1-202ENST00000444177 CHMP4CQ96CF2 233 aa16.52■□□□□ 0.24
TREX1-202ENST00000444177 GMCL1Q96IK5 515 aa16.52■□□□□ 0.24
TREX1-202ENST00000444177 UBE2OQ9C0C9 1292 aaKnown RBP16.52■□□□□ 0.24
TREX1-202ENST00000444177 FRMPD3Q5JV73 1810 aa16.52■□□□□ 0.23
TREX1-202ENST00000444177 DNAJC25-GNG10A0A024R161 153 aa16.51■□□□□ 0.23
TREX1-202ENST00000444177 ZNF865P0CJ78 1059 aaPredicted RBP16.51■□□□□ 0.23
TREX1-202ENST00000444177 FDX1P10109 184 aa16.51■□□□□ 0.23
TREX1-202ENST00000444177 RARBP10826 455 aa16.51■□□□□ 0.23
TREX1-202ENST00000444177 ADCYAP1R1P41586 468 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms