RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 MCM3APO60318 1980 aa15.09■□□□□ 0.01
PDLIM2-212ENST00000443561 PRC1O43663 620 aa15.09■□□□□ 0.01
PDLIM2-212ENST00000443561 FMNL1O95466 1100 aaPredicted RBP15.09■□□□□ 0.01
PDLIM2-212ENST00000443561 GOLGA8HP0CJ92 632 aa15.09■□□□□ 0.01
PDLIM2-212ENST00000443561 FLT3LGP49771 235 aa15.09■□□□□ 0.01
PDLIM2-212ENST00000443561 FCGRTP55899 365 aa15.09■□□□□ 0.01
PDLIM2-212ENST00000443561 PPP4R3BQ5MIZ7 849 aa15.09■□□□□ 0.01
PDLIM2-212ENST00000443561 IQCA1Q86XH1 822 aa15.09■□□□□ 0.01
PDLIM2-212ENST00000443561 STAG2Q8N3U4 1231 aa15.09■□□□□ 0.01
PDLIM2-212ENST00000443561 KIFC2Q96AC6 838 aa15.09■□□□□ 0.01
PDLIM2-212ENST00000443561 GPCPD1Q9NPB8 672 aa15.09■□□□□ 0.01
PDLIM2-212ENST00000443561 PRR12Q9ULL5 1215 aa15.09■□□□□ 0.01
PDLIM2-212ENST00000443561 GTF3C3Q9Y5Q9 886 aa15.09■□□□□ 0.01
PDLIM2-212ENST00000443561 TNPO2O14787 897 aaKnown RBP15.08■□□□□ 0
PDLIM2-212ENST00000443561 IFIT3O14879 490 aaKnown RBP15.08■□□□□ 0
PDLIM2-212ENST00000443561 ATP2A1O14983 1001 aa15.08■□□□□ 0
PDLIM2-212ENST00000443561 IGHA2P01877 340 aa15.08■□□□□ 0
PDLIM2-212ENST00000443561 ERCC3P19447 782 aa15.08■□□□□ 0
PDLIM2-212ENST00000443561 STAT2P52630 851 aa15.08■□□□□ 0
PDLIM2-212ENST00000443561 TROAPQ12815 778 aa15.08■□□□□ 0
PDLIM2-212ENST00000443561 CCDC96Q2M329 555 aa15.08■□□□□ 0
PDLIM2-212ENST00000443561 RALYLQ86SE5 291 aaKnown RBP15.08■□□□□ 0
PDLIM2-212ENST00000443561 RIOX2Q8IUF8 465 aa15.08■□□□□ 0
PDLIM2-212ENST00000443561 MB21D1Q8N884 522 aa15.08■□□□□ 0
PDLIM2-212ENST00000443561 PRPF38AQ8NAV1 312 aaKnown RBP15.08■□□□□ 0
PDLIM2-212ENST00000443561 UBAC1Q9BSL1 405 aa15.08■□□□□ 0
PDLIM2-212ENST00000443561 REC8O95072 547 aa15.07■□□□□ 0
PDLIM2-212ENST00000443561 TRDNQ13061 729 aa15.07■□□□□ 0
PDLIM2-212ENST00000443561 GRB14Q14449 540 aa15.07■□□□□ 0
PDLIM2-212ENST00000443561 PKN2Q16513 984 aaKnown RBP15.07■□□□□ 0
PDLIM2-212ENST00000443561 IFIT1BQ5T764 474 aaKnown RBP15.07■□□□□ 0
PDLIM2-212ENST00000443561 NBPF11Q86T75 865 aa15.07■□□□□ 0
PDLIM2-212ENST00000443561 SHCBP1Q8NEM2 672 aa15.07■□□□□ 0
PDLIM2-212ENST00000443561 SH3TC2Q8TF17 1288 aa15.07■□□□□ 0
PDLIM2-212ENST00000443561 MYL10Q9BUA6 226 aa15.07■□□□□ 0
PDLIM2-212ENST00000443561 RANBP17Q9H2T7 1088 aaKnown RBP15.07■□□□□ 0
PDLIM2-212ENST00000443561 KAT14Q9H8E8 782 aa15.07■□□□□ 0
PDLIM2-212ENST00000443561 RAVER2Q9HCJ3 691 aaKnown RBP15.07■□□□□ 0
PDLIM2-212ENST00000443561 MAD2L2Q9UI95 211 aa15.07■□□□□ 0
PDLIM2-212ENST00000443561 EPB41L2O43491 1005 aaKnown RBP15.06■□□□□ 0
PDLIM2-212ENST00000443561 GNRH1P01148 92 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 ELNP15502 786 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 PTPREP23469 700 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 MAPK4P31152 587 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 TRIM32Q13049 653 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 IRF5Q13568 498 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 KIF22Q14807 665 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 GRM4Q14833 912 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 CCL14Q16627 93 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 CCDC178Q5BJE1 867 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 TMEM67Q5HYA8 995 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 SYDE2Q5VT97 1194 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 PLEKHH3Q7Z736 793 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 FAM160B2Q86V87 743 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 NPLOC4Q8TAT6 608 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 ARMC5Q96C12 935 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 FGD4Q96M96 766 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 AGBL1Q96MI9 1066 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 NEK1Q96PY6 1258 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 UBA5Q9GZZ9 404 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 FLRT1Q9NZU1 646 aa15.06■□□□□ 0
PDLIM2-212ENST00000443561 PALM3A6NDB9 673 aaPredicted RBP15.05■□□□□ -0
PDLIM2-212ENST00000443561 CYTH3O43739 400 aa15.05■□□□□ -0
PDLIM2-212ENST00000443561 COBLO75128 1261 aa15.05■□□□□ -0
PDLIM2-212ENST00000443561 MCM5P33992 734 aa15.05■□□□□ -0
PDLIM2-212ENST00000443561 STAT3P40763 770 aa15.05■□□□□ -0
PDLIM2-212ENST00000443561 PLS1Q14651 629 aa15.05■□□□□ -0
PDLIM2-212ENST00000443561 WTAPQ15007 396 aa15.05■□□□□ -0
PDLIM2-212ENST00000443561 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.05■□□□□ -05e-6■■■□□ 17.2
PDLIM2-212ENST00000443561 RAB11FIP4Q86YS3 637 aa15.05■□□□□ -0
PDLIM2-212ENST00000443561 TRIB2Q92519 343 aa15.05■□□□□ -0
PDLIM2-212ENST00000443561 ZNF333Q96JL9 665 aa15.05■□□□□ -0
PDLIM2-212ENST00000443561 MTA3Q9BTC8 594 aa15.05■□□□□ -0
PDLIM2-212ENST00000443561 BRPF3Q9ULD4 1205 aa15.05■□□□□ -0
PDLIM2-212ENST00000443561 WDR19Q8NEZ3 1342 aa15.05■□□□□ -0
PDLIM2-212ENST00000443561 PPP1R11O60927 126 aaPredicted RBP15.04■□□□□ -0
PDLIM2-212ENST00000443561 RXRAP19793 462 aa15.04■□□□□ -0
PDLIM2-212ENST00000443561 PRMT2P55345 433 aa15.04■□□□□ -0
PDLIM2-212ENST00000443561 MUM1L1Q5H9M0 696 aa15.04■□□□□ -0
PDLIM2-212ENST00000443561 RNF20Q5VTR2 975 aa15.04■□□□□ -0
PDLIM2-212ENST00000443561 SNRNP48Q6IEG0 339 aaKnown RBP15.04■□□□□ -0
PDLIM2-212ENST00000443561 ZNF654Q8IZM8 581 aa15.04■□□□□ -0
PDLIM2-212ENST00000443561 CPXCR1Q8N123 301 aa15.04■□□□□ -0
PDLIM2-212ENST00000443561 CHURC1Q8WUH1 139 aa15.04■□□□□ -0
PDLIM2-212ENST00000443561 MTMR8Q96EF0 704 aa15.04■□□□□ -0
PDLIM2-212ENST00000443561 IL17RAQ96F46 866 aa15.04■□□□□ -0
PDLIM2-212ENST00000443561 TMEM87BQ96K49 555 aa15.04■□□□□ -0
PDLIM2-212ENST00000443561 JAKMIP1Q96N16 626 aaKnown RBP15.04■□□□□ -0
PDLIM2-212ENST00000443561 TEX13BQ9BXU2 312 aa15.04■□□□□ -0
PDLIM2-212ENST00000443561 KIAA0100Q14667 2235 aaKnown RBP15.04■□□□□ -0
PDLIM2-212ENST00000443561 ASTN1O14525 1302 aa15.03■□□□□ -0
PDLIM2-212ENST00000443561 SLC15A5A6NIM6 579 aa15.03■□□□□ -0
PDLIM2-212ENST00000443561 HOXC6P09630 235 aa15.03■□□□□ -0
PDLIM2-212ENST00000443561 ADORA2AP29274 412 aa15.03■□□□□ -0
PDLIM2-212ENST00000443561 LIFRP42702 1097 aa15.03■□□□□ -0
PDLIM2-212ENST00000443561 OAZ1P54368 228 aa15.03■□□□□ -0
PDLIM2-212ENST00000443561 MAP2K5Q13163 448 aa15.03■□□□□ -0
PDLIM2-212ENST00000443561 MTFR1Q15390 333 aa15.03■□□□□ -0
PDLIM2-212ENST00000443561 ASPRV1Q53RT3 343 aa15.03■□□□□ -0
PDLIM2-212ENST00000443561 GPATCH4Q5T3I0 446 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms