RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 TUBBP07437 444 aa17■□□□□ 0.31
CHFR-204ENST00000443047 AKNAD1Q5T1N1 836 aa17■□□□□ 0.31
CHFR-204ENST00000443047 VPS37DQ86XT2 251 aa17■□□□□ 0.31
CHFR-204ENST00000443047 NUP133Q8WUM0 1156 aa17■□□□□ 0.31
CHFR-204ENST00000443047 MMS19Q96T76 1030 aa17■□□□□ 0.31
CHFR-204ENST00000443047 WNK3Q9BYP7 1800 aa17■□□□□ 0.31
CHFR-204ENST00000443047 COBLO75128 1261 aa17■□□□□ 0.31
CHFR-204ENST00000443047 PDE6BP35913 854 aa17■□□□□ 0.31
CHFR-204ENST00000443047 USP14P54578 494 aa17■□□□□ 0.31
CHFR-204ENST00000443047 SLC12A7Q9Y666 1083 aa17■□□□□ 0.31
CHFR-204ENST00000443047 DDX60Q8IY21 1712 aaKnown RBP16.99■□□□□ 0.31
CHFR-204ENST00000443047 MYH15Q9Y2K3 1946 aa16.99■□□□□ 0.31
CHFR-204ENST00000443047 hCG_1642624A0A1W2PR95 340 aa16.99■□□□□ 0.31
CHFR-204ENST00000443047 CHUKO15111 745 aa16.99■□□□□ 0.31
CHFR-204ENST00000443047 NTRK3Q16288 839 aa16.99■□□□□ 0.31
CHFR-204ENST00000443047 KCTD16Q68DU8 428 aa16.99■□□□□ 0.31
CHFR-204ENST00000443047 CAGE1Q8TC20 777 aa16.99■□□□□ 0.31
CHFR-204ENST00000443047 KCNJ14Q9UNX9 436 aa16.99■□□□□ 0.31
CHFR-204ENST00000443047 TFR2Q9UP52 801 aa16.99■□□□□ 0.31
CHFR-204ENST00000443047 PHLPP1O60346 1717 aa16.99■□□□□ 0.31
CHFR-204ENST00000443047 COL22A1Q8NFW1 1626 aaPredicted RBP16.99■□□□□ 0.31
CHFR-204ENST00000443047 SHOX2O60902 331 aaPredicted RBP16.99■□□□□ 0.31
CHFR-204ENST00000443047 SKAP2O75563 359 aaPredicted RBP16.99■□□□□ 0.31
CHFR-204ENST00000443047 IARSP41252 1262 aaKnown RBP16.99■□□□□ 0.31
CHFR-204ENST00000443047 TUBB2AQ13885 445 aa16.99■□□□□ 0.31
CHFR-204ENST00000443047 SLC39A14Q15043 492 aa16.99■□□□□ 0.31
CHFR-204ENST00000443047 TUBB2BQ9BVA1 445 aa16.99■□□□□ 0.31
CHFR-204ENST00000443047 KCNH3Q9ULD8 1083 aa16.99■□□□□ 0.31
CHFR-204ENST00000443047 MINPP1Q9UNW1 487 aa16.99■□□□□ 0.31
CHFR-204ENST00000443047 SND1Q7KZF4 910 aaKnown RBP eCLIP16.98■□□□□ 0.31
CHFR-204ENST00000443047 PANX2Q96RD6 677 aa16.98■□□□□ 0.31
CHFR-204ENST00000443047 ZNF652Q9Y2D9 606 aa16.98■□□□□ 0.31
CHFR-204ENST00000443047 LRP5O75197 1615 aa16.98■□□□□ 0.31
CHFR-204ENST00000443047 NR1I3Q14994 352 aa16.98■□□□□ 0.31
CHFR-204ENST00000443047 COL1A1P02452 1464 aaPredicted RBP16.98■□□□□ 0.31
CHFR-204ENST00000443047 RPSAP08865 295 aaKnown RBP16.98■□□□□ 0.31
CHFR-204ENST00000443047 E2F5Q15329 346 aa16.98■□□□□ 0.31
CHFR-204ENST00000443047 RASGRP2Q7LDG7 609 aa16.98■□□□□ 0.31
CHFR-204ENST00000443047 IQCA1Q86XH1 822 aa16.98■□□□□ 0.31
CHFR-204ENST00000443047 ZNF384Q8TF68 577 aa16.98■□□□□ 0.31
CHFR-204ENST00000443047 MAN1B1Q9UKM7 699 aa16.98■□□□□ 0.31
CHFR-204ENST00000443047 CDC25AP30304 524 aa16.97■□□□□ 0.31
CHFR-204ENST00000443047 TMEM87BQ96K49 555 aa16.97■□□□□ 0.31
CHFR-204ENST00000443047 SCLT1Q96NL6 688 aa16.97■□□□□ 0.31
CHFR-204ENST00000443047 KLC4Q9NSK0 619 aa16.97■□□□□ 0.31
CHFR-204ENST00000443047 MCM8Q9UJA3 840 aa16.97■□□□□ 0.31
CHFR-204ENST00000443047 NRAPQ86VF7 1730 aa16.97■□□□□ 0.31
CHFR-204ENST00000443047 GNPATO15228 680 aa16.97■□□□□ 0.31
CHFR-204ENST00000443047 FNTAP49354 379 aa16.97■□□□□ 0.31
CHFR-204ENST00000443047 FXR1P51114 621 aaKnown RBP eCLIP16.97■□□□□ 0.31
CHFR-204ENST00000443047 CDR1P51861 262 aa16.97■□□□□ 0.31
CHFR-204ENST00000443047 BARGINQ6ZT62 677 aa16.97■□□□□ 0.31
CHFR-204ENST00000443047 TTF2Q9UNY4 1162 aaKnown RBP16.97■□□□□ 0.31
CHFR-204ENST00000443047 MEFVO15553 781 aaPredicted RBP16.96■□□□□ 0.31
CHFR-204ENST00000443047 CCT6AP40227 531 aaKnown RBP16.96■□□□□ 0.31
CHFR-204ENST00000443047 CLNS1AP54105 237 aaKnown RBP16.96■□□□□ 0.31
CHFR-204ENST00000443047 ALX1Q15699 326 aa16.96■□□□□ 0.31
CHFR-204ENST00000443047 CEP85LQ5SZL2 805 aa16.96■□□□□ 0.31
CHFR-204ENST00000443047 B4GALNT4Q76KP1 1039 aa16.96■□□□□ 0.31
CHFR-204ENST00000443047 BRAPQ7Z569 592 aa16.96■□□□□ 0.31
CHFR-204ENST00000443047 FAXDC2Q96IV6 333 aa16.96■□□□□ 0.31
CHFR-204ENST00000443047 FAM84BQ96KN1 310 aaPredicted RBP16.96■□□□□ 0.31
CHFR-204ENST00000443047 ZC3H4Q9UPT8 1303 aaKnown RBP16.96■□□□□ 0.31
CHFR-204ENST00000443047 ZNF18P17022 549 aa16.96■□□□□ 0.31
CHFR-204ENST00000443047 PPARAQ07869 468 aa16.96■□□□□ 0.31
CHFR-204ENST00000443047 SH2D3CQ8N5H7 860 aa16.96■□□□□ 0.31
CHFR-204ENST00000443047 RRP36Q96EU6 259 aaKnown RBP16.96■□□□□ 0.31
CHFR-204ENST00000443047 NACAP1Q9BZK3 213 aa16.96■□□□□ 0.31
CHFR-204ENST00000443047 GRIN2DO15399 1336 aa16.96■□□□□ 0.31
CHFR-204ENST00000443047 WDR19Q8NEZ3 1342 aa16.96■□□□□ 0.31
CHFR-204ENST00000443047 C4AP0C0L4 1744 aa16.96■□□□□ 0.31
CHFR-204ENST00000443047 C4BP0C0L5 1744 aa16.96■□□□□ 0.31
CHFR-204ENST00000443047 BTBD18B2RXH4 712 aa16.95■□□□□ 0.3
CHFR-204ENST00000443047 MATR3P43243 847 aaKnown RBP eCLIP16.95■□□□□ 0.3
CHFR-204ENST00000443047 WTAPQ15007 396 aa16.95■□□□□ 0.3
CHFR-204ENST00000443047 TXNRD3Q86VQ6 643 aa16.95■□□□□ 0.3
CHFR-204ENST00000443047 BAZ2BQ9UIF8 2168 aaKnown RBP16.95■□□□□ 0.3
CHFR-204ENST00000443047 MAGEB6P1A0A0J9YX57 407 aa16.95■□□□□ 0.3
CHFR-204ENST00000443047 NAA25Q14CX7 972 aa16.95■□□□□ 0.3
CHFR-204ENST00000443047 JMYQ8N9B5 988 aa16.95■□□□□ 0.3
CHFR-204ENST00000443047 MED15Q96RN5 788 aa16.95■□□□□ 0.3
CHFR-204ENST00000443047 NUP88Q99567 741 aaPredicted RBP16.95■□□□□ 0.3
CHFR-204ENST00000443047 SARNPP82979 210 aaKnown RBP16.95■□□□□ 0.3
CHFR-204ENST00000443047 IFT88Q13099 833 aa16.95■□□□□ 0.3
CHFR-204ENST00000443047 FAM43BQ6ZT52 329 aaPredicted RBP16.95■□□□□ 0.3
CHFR-204ENST00000443047 SGMS1Q86VZ5 419 aa16.95■□□□□ 0.3
CHFR-204ENST00000443047 STAG1Q8WVM7 1258 aa16.95■□□□□ 0.3
CHFR-204ENST00000443047 ARL8AQ96BM9 186 aa16.95■□□□□ 0.3
CHFR-204ENST00000443047 RUFY1Q96T51 708 aa16.95■□□□□ 0.3
CHFR-204ENST00000443047 ZNF185O15231 689 aa16.94■□□□□ 0.3
CHFR-204ENST00000443047 POLR2DO15514 142 aaKnown RBP16.94■□□□□ 0.3
CHFR-204ENST00000443047 C21orf2O43822 256 aa16.94■□□□□ 0.3
CHFR-204ENST00000443047 ATP1A1P05023 1023 aaKnown RBP16.94■□□□□ 0.3
CHFR-204ENST00000443047 PDHBP11177 359 aa16.94■□□□□ 0.3
CHFR-204ENST00000443047 GCFC2P16383 781 aaKnown RBP16.94■□□□□ 0.3
CHFR-204ENST00000443047 MCM3P25205 808 aa16.94■□□□□ 0.3
CHFR-204ENST00000443047 SSRP1Q08945 709 aaKnown RBP16.94■□□□□ 0.3
CHFR-204ENST00000443047 CCDC40Q4G0X9 1142 aa16.94■□□□□ 0.3
CHFR-204ENST00000443047 NBPF5PQ86XG9 351 aaPredicted RBP16.94■□□□□ 0.3
CHFR-204ENST00000443047 HPSEQ9Y251 543 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms