RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 GOPCQ9HD26 462 aa10.01□□□□□ -0.81
TOP3B-209ENST00000442653 ARPP21Q9UBL0 812 aaPredicted RBP10.01□□□□□ -0.81
TOP3B-209ENST00000442653 NRBP1Q9UHY1 535 aa10.01□□□□□ -0.81
TOP3B-209ENST00000442653 RIPK3Q9Y572 518 aa10.01□□□□□ -0.81
TOP3B-209ENST00000442653 NDUFB10O96000 172 aa10□□□□□ -0.81
TOP3B-209ENST00000442653 EPHB4P54760 987 aa10□□□□□ -0.81
TOP3B-209ENST00000442653 PHF6Q8IWS0 365 aaKnown RBP eCLIP10□□□□□ -0.81
TOP3B-209ENST00000442653 OSBP2Q969R2 916 aa10□□□□□ -0.81
TOP3B-209ENST00000442653 SLF1Q9BQI6 1058 aa10□□□□□ -0.81
TOP3B-209ENST00000442653 EPB41L4AQ9HCS5 686 aaPredicted RBP10□□□□□ -0.81
TOP3B-209ENST00000442653 RCAN3Q9UKA8 241 aa10□□□□□ -0.81
TOP3B-209ENST00000442653 DIS3Q9Y2L1 958 aaKnown RBP10□□□□□ -0.81
TOP3B-209ENST00000442653 DNAJC25-GNG10A0A024R161 153 aa9.99□□□□□ -0.81
TOP3B-209ENST00000442653 IGKV6D-41A0A0C4DH26 115 aa9.99□□□□□ -0.81
TOP3B-209ENST00000442653 A0A1W2PQ45 241 aaPredicted RBP9.99□□□□□ -0.81
TOP3B-209ENST00000442653 A0A1W2PQY0 241 aa9.99□□□□□ -0.81
TOP3B-209ENST00000442653 MINDY4BA8MYZ0 360 aa9.99□□□□□ -0.81
TOP3B-209ENST00000442653 F5H6K3 240 aa9.99□□□□□ -0.81
TOP3B-209ENST00000442653 PQBP1O60828 265 aaKnown RBP9.99□□□□□ -0.81
TOP3B-209ENST00000442653 ADAMTS4O75173 837 aa9.99□□□□□ -0.81
TOP3B-209ENST00000442653 KLRC3Q07444 240 aa9.99□□□□□ -0.81
TOP3B-209ENST00000442653 SBK1Q52WX2 424 aa9.99□□□□□ -0.81
TOP3B-209ENST00000442653 ZNF697Q5TEC3 545 aa9.99□□□□□ -0.81
TOP3B-209ENST00000442653 SNRNP48Q6IEG0 339 aaKnown RBP9.99□□□□□ -0.81
TOP3B-209ENST00000442653 ZSCAN25Q6NSZ9 544 aa9.99□□□□□ -0.81
TOP3B-209ENST00000442653 RNF180Q86T96 592 aa9.99□□□□□ -0.81
TOP3B-209ENST00000442653 KBTBD3Q8NAB2 608 aa9.99□□□□□ -0.81
TOP3B-209ENST00000442653 CDX2Q99626 313 aaPredicted RBP9.99□□□□□ -0.81
TOP3B-209ENST00000442653 COL25A1Q9BXS0 654 aaPredicted RBP9.99□□□□□ -0.81
TOP3B-209ENST00000442653 TEX13BQ9BXU2 312 aa9.99□□□□□ -0.81
TOP3B-209ENST00000442653 TTYH1Q9H313 450 aaPredicted RBP9.99□□□□□ -0.81
TOP3B-209ENST00000442653 ECHDC1Q9NTX5 307 aa9.99□□□□□ -0.81
TOP3B-209ENST00000442653 REV3LO60673 3130 aa9.99□□□□□ -0.81
TOP3B-209ENST00000442653 MYADML2A6NDP7 307 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 KIAA0355O15063 1070 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 ADCY6O43306 1168 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 PRDM1O75626 825 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 SNAI1O95863 264 aaPredicted RBP9.98□□□□□ -0.81
TOP3B-209ENST00000442653 CLTBP09497 229 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 AKR1A1P14550 325 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 COPB2P35606 906 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 ACLYP53396 1101 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 IRX5P78411 483 aaPredicted RBP9.98□□□□□ -0.81
TOP3B-209ENST00000442653 GIMAP6Q6P9H5 292 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 APPBP2Q92624 585 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 FGD4Q96M96 766 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 SEMA6BQ9H3T3 888 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 MKNK2Q9HBH9 465 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 NYAP2Q9P242 653 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 CNPY2Q9Y2B0 182 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 TACC3Q9Y6A5 838 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 SYNRGQ9UMZ2 1314 aa9.98□□□□□ -0.81
TOP3B-209ENST00000442653 M0R2C6 588 aa9.97□□□□□ -0.81
TOP3B-209ENST00000442653 ATP2A1O14983 1001 aa9.97□□□□□ -0.81
TOP3B-209ENST00000442653 RNF113AO15541 343 aaKnown RBP9.97□□□□□ -0.81
TOP3B-209ENST00000442653 GPAA1O43292 621 aa9.97□□□□□ -0.81
TOP3B-209ENST00000442653 SLC4A3P48751 1232 aa9.97□□□□□ -0.81
TOP3B-209ENST00000442653 SMAD3P84022 425 aaKnown RBP9.97□□□□□ -0.81
TOP3B-209ENST00000442653 FAAP100Q0VG06 881 aa9.97□□□□□ -0.81
TOP3B-209ENST00000442653 CCSAPQ6IQ19 270 aaPredicted RBP9.97□□□□□ -0.81
TOP3B-209ENST00000442653 MAMDC4Q6UXC1 1216 aa9.97□□□□□ -0.81
TOP3B-209ENST00000442653 ANKRD33Q7Z3H0 272 aa9.97□□□□□ -0.81
TOP3B-209ENST00000442653 CPXCR1Q8N123 301 aa9.97□□□□□ -0.81
TOP3B-209ENST00000442653 LRRC47Q8N1G4 583 aaKnown RBP9.97□□□□□ -0.81
TOP3B-209ENST00000442653 PRPF38AQ8NAV1 312 aaKnown RBP9.97□□□□□ -0.81
TOP3B-209ENST00000442653 KLHDC9Q8NEP7 349 aa9.97□□□□□ -0.81
TOP3B-209ENST00000442653 CEP95Q96GE4 821 aa9.97□□□□□ -0.81
TOP3B-209ENST00000442653 CHMP4BQ9H444 224 aaKnown RBP9.97□□□□□ -0.81
TOP3B-209ENST00000442653 RAVER2Q9HCJ3 691 aaKnown RBP9.97□□□□□ -0.81
TOP3B-209ENST00000442653 CLIP2Q9UDT6 1046 aa9.97□□□□□ -0.81
TOP3B-209ENST00000442653 SYNGAP1Q96PV0 1343 aa9.97□□□□□ -0.81
TOP3B-209ENST00000442653 MYH4Q9Y623 1939 aa9.97□□□□□ -0.81
TOP3B-209ENST00000442653 MCM3APO60318 1980 aa9.97□□□□□ -0.81
TOP3B-209ENST00000442653 TRANK1O15050 2925 aa9.96□□□□□ -0.81
TOP3B-209ENST00000442653 XIRP2A4UGR9 3374 aa9.96□□□□□ -0.81
TOP3B-209ENST00000442653 RAG1P15918 1043 aa9.96□□□□□ -0.82
TOP3B-209ENST00000442653 TDO2P48775 406 aa9.96□□□□□ -0.82
TOP3B-209ENST00000442653 KCNA10Q16322 511 aa9.96□□□□□ -0.82
TOP3B-209ENST00000442653 MSL3Q8N5Y2 521 aaKnown RBP9.96□□□□□ -0.82
TOP3B-209ENST00000442653 MAFAQ8NHW3 353 aaPredicted RBP9.96□□□□□ -0.82
TOP3B-209ENST00000442653 MYLIPQ8WY64 445 aa9.96□□□□□ -0.82
TOP3B-209ENST00000442653 MKL1Q969V6 931 aa9.96□□□□□ -0.82
TOP3B-209ENST00000442653 KIFC2Q96AC6 838 aa9.96□□□□□ -0.82
TOP3B-209ENST00000442653 DDX11Q96FC9 970 aa9.96□□□□□ -0.82
TOP3B-209ENST00000442653 RNPC3Q96LT9 517 aaKnown RBP9.96□□□□□ -0.82
TOP3B-209ENST00000442653 TOX2Q96NM4 488 aa9.96□□□□□ -0.82
TOP3B-209ENST00000442653 TSEN34Q9BSV6 310 aaKnown RBP9.96□□□□□ -0.82
TOP3B-209ENST00000442653 DCTPP1Q9H773 170 aa9.96□□□□□ -0.82
TOP3B-209ENST00000442653 SLC38A10Q9HBR0 1119 aa9.96□□□□□ -0.82
TOP3B-209ENST00000442653 TMEM39AQ9NV64 488 aa9.96□□□□□ -0.82
TOP3B-209ENST00000442653 MTMR4Q9NYA4 1195 aa9.96□□□□□ -0.82
TOP3B-209ENST00000442653 ZHX1Q9UKY1 873 aaPredicted RBP9.96□□□□□ -0.82
TOP3B-209ENST00000442653 TBX21Q9UL17 535 aa9.96□□□□□ -0.82
TOP3B-209ENST00000442653 BDP1A6H8Y1 2624 aa9.96□□□□□ -0.82
TOP3B-209ENST00000442653 ZBED4O75132 1171 aa9.95□□□□□ -0.82
TOP3B-209ENST00000442653 DUSP11O75319 330 aaKnown RBP9.95□□□□□ -0.82
TOP3B-209ENST00000442653 APPP05067 770 aa9.95□□□□□ -0.82
TOP3B-209ENST00000442653 FPGSQ05932 587 aa9.95□□□□□ -0.82
TOP3B-209ENST00000442653 ACVR2BQ13705 512 aa9.95□□□□□ -0.82
TOP3B-209ENST00000442653 CCDC144BQ3MJ40 725 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms