RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 SSR1P43307 286 aaKnown RBP8.39□□□□□ -1.07
HDAC9-214ENST00000441542 TOB1P50616 345 aaPredicted RBP8.39□□□□□ -1.07
HDAC9-214ENST00000441542 TYW1BQ6NUM6 668 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 SYMPKQ92797 1274 aaKnown RBP8.39□□□□□ -1.07
HDAC9-214ENST00000441542 ZNHIT6Q9NWK9 470 aaKnown RBP8.39□□□□□ -1.07
HDAC9-214ENST00000441542 KDRP35968 1356 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 KIF20BQ96Q89 1820 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 ANKRD18BA2A2Z9 1011 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 PHF20L1A8MW92 1017 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 B4DLN1 442 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 PPP1R37O75864 691 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 KIF5AQ12840 1032 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 APTXQ7Z2E3 356 aaKnown RBP8.39□□□□□ -1.07
HDAC9-214ENST00000441542 KSR1Q8IVT5 923 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 OR8K1Q8NGG5 319 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 CTAGE1Q96RT6 745 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 ZCWPW1Q9H0M4 648 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 HAUS4Q9H6D7 363 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 VCPKMTQ9H867 229 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 HELLSQ9NRZ9 838 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 IRAK4Q9NWZ3 460 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 SLC12A7Q9Y666 1083 aa8.39□□□□□ -1.07
HDAC9-214ENST00000441542 ZNF335Q9H4Z2 1342 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-214ENST00000441542 PALLDQ8WX93 1383 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 GOLGA6L10A6NI86 522 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 DNM1LO00429 736 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 FSBPO95073 299 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 CTDSPL2Q05D32 466 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 PTGISQ16647 500 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 QPCTQ16769 361 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 FAM133BQ5BKY9 247 aaKnown RBP8.38□□□□□ -1.07
HDAC9-214ENST00000441542 APBB1IPQ7Z5R6 666 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-214ENST00000441542 CPLX4Q7Z7G2 160 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 TBC1D1Q86TI0 1168 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-214ENST00000441542 TBC1D10CQ8IV04 446 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 KCNV2Q8TDN2 545 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 PAGE5Q96GU1 130 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 CPSF2Q9P2I0 782 aaKnown RBP8.38□□□□□ -1.07
HDAC9-214ENST00000441542 FBXO2Q9UK22 296 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-214ENST00000441542 PACSIN2Q9UNF0 486 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-214ENST00000441542 ANGEL1Q9UNK9 670 aaKnown RBP8.38□□□□□ -1.07
HDAC9-214ENST00000441542 CAPN6Q9Y6Q1 641 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 GPAA1O43292 621 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 TPD52L2O43399 206 aaKnown RBP8.38□□□□□ -1.07
HDAC9-214ENST00000441542 ACTN4O43707 911 aaKnown RBP8.38□□□□□ -1.07
HDAC9-214ENST00000441542 CDKL5O76039 1030 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 CALRP27797 417 aaKnown RBP8.38□□□□□ -1.07
HDAC9-214ENST00000441542 POLD1P28340 1107 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 PAFAH1B1P43034 410 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 ZAP70P43403 619 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 VAV2P52735 878 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 TUBB4BP68371 445 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 SCARF1Q14162 830 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 KCNB1Q14721 858 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 SPA17Q15506 151 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 AP1ARQ63HQ0 302 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 APOA5Q6Q788 366 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 FAM228AQ86W67 206 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 AMOTL1Q8IY63 956 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 MB21D2Q8IYB1 491 aaPredicted RBP8.38□□□□□ -1.07
HDAC9-214ENST00000441542 SPATA4Q8NEY3 305 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 AENQ8WTP8 325 aaKnown RBP8.38□□□□□ -1.07
HDAC9-214ENST00000441542 NSMCE1Q8WV22 266 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 CYFIP2Q96F07 1278 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 TRIM47Q96LD4 638 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 EPN3Q9H201 632 aa8.38□□□□□ -1.07
HDAC9-214ENST00000441542 RBM12Q9NTZ6 932 aaKnown RBP8.38□□□□□ -1.07
HDAC9-214ENST00000441542 MPHOSPH10O00566 681 aaKnown RBP8.37□□□□□ -1.07
HDAC9-214ENST00000441542 HEXIM1O94992 359 aaKnown RBP8.37□□□□□ -1.07
HDAC9-214ENST00000441542 TBC1D8BQ0IIM8 1120 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 TRIM68Q6AZZ1 485 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 IQCEQ6IPM2 695 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 CHADLQ6NUI6 762 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 FUKQ8N0W3 1084 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 RSRC1Q96IZ7 334 aaKnown RBP8.37□□□□□ -1.07
HDAC9-214ENST00000441542 SH3GL2Q99962 352 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 UBN2Q6ZU65 1347 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 ZNF233A6NK53 670 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 AKR1B10O60218 316 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 ERCC5P28715 1186 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-214ENST00000441542 SMTNP53814 917 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 ARID5AQ03989 594 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 MTA1Q13330 715 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 CUL4BQ13620 913 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 ZKSCAN8Q15776 578 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-214ENST00000441542 UHMK1Q8TAS1 419 aaKnown RBP8.37□□□□□ -1.07
HDAC9-214ENST00000441542 ARHGEF1Q92888 912 aaKnown RBP8.37□□□□□ -1.07
HDAC9-214ENST00000441542 CCDC42Q96M95 316 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 KRT12Q99456 494 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 MTA3Q9BTC8 594 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 AGXT2Q9BYV1 514 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 G3BP2Q9UN86 482 aaKnown RBP8.37□□□□□ -1.07
HDAC9-214ENST00000441542 PPP1R3GB7ZBB8 358 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 GLI1P08151 1106 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 PTPREP23469 700 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 PAK1Q13153 545 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 THEMIS2Q5TEJ8 643 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 ANKRD23Q86SG2 305 aa8.37□□□□□ -1.07
HDAC9-214ENST00000441542 DDX42Q86XP3 938 aaKnown RBP eCLIP8.37□□□□□ -1.07
HDAC9-214ENST00000441542 MDM1Q8TC05 714 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms